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Report for CCDS41929.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41929.1 Public Homo sapiens 14 DCAF11 24 110 108 CCDS HistoryNCBI Gene:80344Re-query CCDS DB by CCDS ID:41929.1Re-query CCDS DB by GeneID:80344See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41929.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000396941.8 ENSP00000380146.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396941.8Link to Ensembl Protein Viewer:ENSP00000380146.4Re-query CCDS DB by Nucleotide ID:ENST00000396941Re-query CCDS DB by Protein ID:ENSP00000380146
Original member Current member NCBI NM_181357.2 NP_852002.1 Accepted alive Link to Nucleotide Sequence:NM_181357.2Link to Protein Sequence:NP_852002.1Re-query CCDS DB by Nucleotide ID:NM_181357Re-query CCDS DB by Protein ID:NP_852002Link to BLAST:NP_852002.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_852002.1 520 Q8TEB1-2 520 100% 0 0

Chromosomal Locations for CCDS 41929.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 24115595 24115726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24116972 24117044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24117266 24117393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24117668 24117732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24118055 24118155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24118388 24118534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24118750 24118804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24119145 24119213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24119559 24119616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24119711 24119896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24120838 24120991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24121365 24121517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24122971 24123077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24123175 24123309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1563 nt):
ATGGGATCGCGGAACAGCAGCAGTGCAGGATCCGGGTCCGGAGACCCCTCCGAGGGCTTGCCCCGAAGAG
GGGCTGGCCTGCGTCGGAGTGAGGAAGAGGAAGAAGAGGATGAAGATGTGGATCTGGCCCAGGCCCTCTT
GGACTCAGAGGAAGAGAATGACAGAGCTTGGGATGGTCGTCTTGGGGATCGATACAACCCACCTGTGGAT
GCTACCCCTGACACCCGGGAGCTGGAATTCAATGAGATCAAGACACAAGTGGAACTGGCCACAGGGCAGC
TGGGGCTTAGGCGGGCCGCCCAGAAGCACAGCTTTCCTCGAATGTTGCACCAGAGAGAACGGGGCCTCTG
CCATCGGGGAAGCTTCTCCCTTGGAGAACAGTCTCGAGTGATATCTCACTTCTTGCCCAATGATCTGGGC
TTCACTGATAGCTACTCTCAGAAGGCTTTCTGTGGCATCTACAGCAAAGATGGTCAAATATTCATGTCTG
CTTGCCAAGACCAGACAATCCGACTCTATGACTGCCGATATGGCCGTTTCCGTAAATTCAAGAGCATCAA
GGCCCGCGACGTAGGCTGGAGCGTCTTGGATGTGGCCTTCACCCCTGATGGGAACCACTTCCTCTACTCT
AGCTGGTCTGATTACATTCATATCTGCAATATCTATGGTGAGGGAGATACACACACTGCCCTGGATCTCA
GGCCAGATGAGCGTCGCTTTGCTGTCTTCTCCATTGCTGTCTCCTCAGATGGACGAGAAGTACTAGGAGG
GGCCAATGATGGCTGCCTGTATGTCTTTGACCGAGAACAGAACCGGCGCACCCTTCAGATTGAGTCCCAT
GAGGATGATGTGAATGCAGTGGCCTTTGCTGATATAAGCTCCCAAATCCTGTTCTCTGGGGGAGATGATG
CCATCTGCAAAGTGTGGGATCGACGCACCATGCGGGAGGATGACCCCAAGCCTGTGGGTGCACTGGCTGG
ACACCAGGATGGCATCACCTTCATTGACAGCAAGGGTGATGCCCGGTATCTGATCTCCAACTCTAAAGAC
CAGACCATCAAACTCTGGGATATCCGACGCTTTTCCAGCCGGGAAGGCATGGAAGCTTCACGCCAGGCTG
CCACACAGCAAAACTGGGACTATCGGTGGCAGCAAGTGCCCAAAAAAGCCTGGCGGAAGCTGAAGCTCCC
AGGGGACAGCTCCTTGATGACCTACCGGGGCCACGGAGTGCTGCACACCCTCATCCGCTGCCGGTTCTCC
CCCATTCATAGCACTGGCCAGCAGTTCATCTACAGTGGCTGCTCCACTGGCAAAGTGGTTGTGTACGACC
TTCTAAGTGGCCACATTGTGAAGAAGCTGACCAACCACAAGGCCTGTGTGCGTGACGTCAGTTGGCACCC
CTTTGAAGAGAAGATTGTCAGCAGTTCGTGGGACGGGAACCTGCGTCTGTGGCAGTACCGCCAGGCTGAG
TACTTCCAGGATGACATGCCAGAATCTGAGGAATGTGCCAGCGCCCCTGCCCCAGTGCCCCAATCCTCTA
CACCCTTTTCCTCACCCCAGTAG

Translation (520 aa):
MGSRNSSSAGSGSGDPSEGLPRRGAGLRRSEEEEEEDEDVDLAQALLDSEEENDRAWDGRLGDRYNPPVD
ATPDTRELEFNEIKTQVELATGQLGLRRAAQKHSFPRMLHQRERGLCHRGSFSLGEQSRVISHFLPNDLG
FTDSYSQKAFCGIYSKDGQIFMSACQDQTIRLYDCRYGRFRKFKSIKARDVGWSVLDVAFTPDGNHFLYS
SWSDYIHICNIYGEGDTHTALDLRPDERRFAVFSIAVSSDGREVLGGANDGCLYVFDREQNRRTLQIESH
EDDVNAVAFADISSQILFSGGDDAICKVWDRRTMREDDPKPVGALAGHQDGITFIDSKGDARYLISNSKD
QTIKLWDIRRFSSREGMEASRQAATQQNWDYRWQQVPKKAWRKLKLPGDSSLMTYRGHGVLHTLIRCRFS
PIHSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLTNHKACVRDVSWHPFEEKIVSSSWDGNLRLWQYRQAE
YFQDDMPESEECASAPAPVPQSSTPFSSPQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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