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Report for CCDS4194.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4194.1 Public Homo sapiens 5 MYOT 24 110 108 CCDS HistoryNCBI Gene:9499Re-query CCDS DB by CCDS ID:4194.1Re-query CCDS DB by GeneID:9499See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4194.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000239926.9 ENSP00000239926.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000239926.9Link to Ensembl Protein Viewer:ENSP00000239926.4Re-query CCDS DB by Nucleotide ID:ENST00000239926Re-query CCDS DB by Protein ID:ENSP00000239926
Original member Current member NCBI NM_006790.3 NP_006781.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006790.3Link to Protein Sequence:NP_006781.1Re-query CCDS DB by Nucleotide ID:NM_006790Re-query CCDS DB by Protein ID:NP_006781Link to BLAST:NP_006781.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006781.1 498 Q9UBF9-1 498 99.7992% 0 1

Chromosomal Locations for CCDS 4194.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 137870652 137871007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 137875829 137876003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 137877520 137877621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 137880816 137880865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 137881973 137882105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 137883384 137883591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 137886048 137886213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 137886864 137886997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 137887213 137887385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1497 nt):
ATGTTTAACTACGAACGTCCAAAACACTTCATCCAGTCCCAAAACCCATGTGGCTCCAGATTGCAGCCTC
CTGGACCAGAAACCTCCAGCTTCTCTAGCCAGACCAAACAGTCTTCCATTATCATCCAGCCCCGCCAGTG
TACAGAGCAAAGATTTTCTGCCTCCTCAACACTGAGCTCTCACATCACCATGTCCTCCTCTGCTTTCCCT
GCTTCTCCCCAGCAGCATGCTGGCTCCAACCCAGGCCAAAGGGTTACAACCACCTATAACCAGTCCCCAG
CCAGCTTCCTCAGCTCCATATTACCATCACAGCCTGATTACAATAGCAGTAAAATCCCTTCCGCTATGGA
TTCCAACTATCAACAGTCCTCAGCTGGCCAACCTATAAATGCAAAGCCATCCCAAACTGCAAATGCTAAG
CCCATACCAAGAACTCCTGATCATGAAATACAAGGATCAAAAGAAGCTTTGATTCAAGATTTGGAAAGAA
AGCTGAAATGCAAGGACACCCTTCTTCATAATGGAAATCAACGTCTAACATATGAAGAGAAGATGGCTCG
CAGATTGCTAGGACCACAGAATGCAGCTGCTGTGTTTCAAGCTCAGGATGACAGTGGTGCACAAGACTCG
CAGCAACACAACTCAGAACATGCGCGACTGCAAGTTCCTACATCACAAGTAAGAAGTAGATCAACCTCAA
GGGGAGATGTGAATGATCAGGATGCAATCCAGGAGAAATTTTACCCACCACGTTTCATTCAAGTGCCAGA
GAACATGTCGATTGATGAAGGAAGATTCTGCAGAATGGACTTCAAAGTGAGTGGACTGCCAGCTCCTGAT
GTGTCATGGTATCTAAATGGAAGAACAGTTCAATCAGATGATTTGCACAAAATGATAGTGTCTGAGAAGG
GTCTTCATTCACTCATCTTTGAAGTAGTCAGAGCTTCAGATGCAGGGGCTTATGCATGTGTTGCCAAGAA
TAGAGCAGGAGAAGCCACCTTCACTGTGCAGCTGGATGTCCTTGCAAAAGAACATAAAAGAGCACCAATG
TTTATCTACAAACCACAGAGCAAAAAAGTTTTAGAGGGAGATTCAGTGAAACTAGAATGCCAGATCTCGG
CTATACCTCCACCAAAGCTTTTCTGGAAAAGAAATAATGAAATGGTACAATTCAACACTGACCGAATAAG
CTTATATCAAGATAACACTGGAAGAGTTACTTTACTGATAAAAGATGTAAACAAGAAAGATGCTGGGTGG
TATACTGTGTCAGCAGTTAATGAAGCTGGAGTGACTACATGTAACACAAGATTAGACGTTACGGCACGTC
CAAACCAAACTCTTCCAGCTCCTAAGCAGTTACGGGTTCGACCAACATTCAGCAAATATTTAGCACTTAA
TGGGAAAGGTTTGAATGTAAAACAAGCTTTTAACCCAGAAGGAGAATTTCAGCGTTTGGCAGCTCAATCT
GGACTCTATGAAAGTGAAGAACTTTAA

Translation (498 aa):
MFNYERPKHFIQSQNPCGSRLQPPGPETSSFSSQTKQSSIIIQPRQCTEQRFSASSTLSSHITMSSSAFP
ASPQQHAGSNPGQRVTTTYNQSPASFLSSILPSQPDYNSSKIPSAMDSNYQQSSAGQPINAKPSQTANAK
PIPRTPDHEIQGSKEALIQDLERKLKCKDTLLHNGNQRLTYEEKMARRLLGPQNAAAVFQAQDDSGAQDS
QQHNSEHARLQVPTSQVRSRSTSRGDVNDQDAIQEKFYPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPD
VSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKNRAGEATFTVQLDVLAKEHKRAPM
FIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGW
YTVSAVNEAGVTTCNTRLDVTARPNQTLPAPKQLRVRPTFSKYLALNGKGLNVKQAFNPEGEFQRLAAQS
GLYESEEL


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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