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Report for CCDS41941.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41941.1 Public Homo sapiens 14 EAPP 24 110 108 CCDS HistoryNCBI Gene:55837Re-query CCDS DB by CCDS ID:41941.1Re-query CCDS DB by GeneID:55837See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41941.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000250454.8 ENSP00000250454.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000250454.8Link to Ensembl Protein Viewer:ENSP00000250454.3Re-query CCDS DB by Nucleotide ID:ENST00000250454Re-query CCDS DB by Protein ID:ENSP00000250454
Original member Current member NCBI NM_018453.4 NP_060923.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018453.4Link to Protein Sequence:NP_060923.2Re-query CCDS DB by Nucleotide ID:NM_018453Re-query CCDS DB by Protein ID:NP_060923Link to BLAST:NP_060923.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060923.2 285 Q56P03 285 100% 0 0

Chromosomal Locations for CCDS 41941.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 34516310 34516586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34524697 34524807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34529358 34529475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34533444 34533539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34536094 34536275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34539555 34539628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (858 nt):
ATGAACCGGCTTCCGGATGACTACGACCCCTACGCGGTTGAAGAGCCTAGCGACGAGGAGCCGGCTTTGA
GCAGCTCTGAGGATGAAGTGGATGTGCTTTTACATGGAACTCCTGACCAAAAACGAAAACTCATCAGAGA
ATGTCTTACCGGAGAAAGTGAATCATCTAGTGAAGATGAATTTGAAAAGGAGATGGAAGCTGAATTAAAT
TCTACCATGAAAACAATGGAGGACAAGTTATCCTCTCTGGGAACTGGATCTTCCTCAGGAAATGGAAAAG
TTGCAACAGCTCCGACAAGGTACTACGATGATATATATTTTGATTCTGATTCCGAGGATGAAGACAGAGC
AGTACAGGTGACCAAGAAAAAAAAGAAGAAACAACACAAGATTCCAACAAATGACGAATTACTGTATGAT
CCTGAAAAAGATAACAGAGATCAGGCCTGGGTTGATGCACAGAGAAGGGGTTACCATGGTTTGGGACCAC
AGAGATCACGTCAACAACAGCCTGTTCCAAATAGTGATGCTGTCTTGAATTGTCCTGCCTGCATGACCAC
ACTTTGCCTTGATTGCCAAAGGCATGAATCATACAAAACTCAATATAGAGCAATGTTTGTAATGAATTGT
TCTATTAACAAAGAGGAGGTTCTAAGATATAAAGCCTCAGAGAACAGGAAGAAAAGGCGGGTCCATAAGA
AGATGAGGTCTAACCGGGAAGATGCTGCCGAGAAGGCAGAGACAGATGTGGAAGAAATCTATCACCCAGT
CATGTGCACTGAATGTTCCACTGAAGTGGCAGTCTACGACAAGGATGAAGTCTTTCATTTTTTCAATGTT
TTAGCAAGCCATTCCTAA

Translation (285 aa):
MNRLPDDYDPYAVEEPSDEEPALSSSEDEVDVLLHGTPDQKRKLIRECLTGESESSSEDEFEKEMEAELN
STMKTMEDKLSSLGTGSSSGNGKVATAPTRYYDDIYFDSDSEDEDRAVQVTKKKKKKQHKIPTNDELLYD
PEKDNRDQAWVDAQRRGYHGLGPQRSRQQQPVPNSDAVLNCPACMTTLCLDCQRHESYKTQYRAMFVMNC
SINKEEVLRYKASENRKKRRVHKKMRSNREDAAEKAETDVEEIYHPVMCTECSTEVAVYDKDEVFHFFNV
LASHS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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