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Report for CCDS41955.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
41955.1 |
Public |
Homo sapiens |
14 |
WDHD1 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:11169](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:41955.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:11169](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 14 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 41955.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
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![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000420358.2 |
ENSP00000399349.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000420358.2](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000399349.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000420358](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000399349](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001008396.3 |
NP_001008397.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001008396.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001008397.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001008396](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001008397](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001008397.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001008397.1 |
1006 |
O75717-2 |
1006 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 41955.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3021 nt): ATGGATAGCAGCCAACAGAAAACATTTCGAGGACATGATGCCCCTGTTTTAAGTCTTTCCTTTGATCCTA AGGACATCTTTCTGGCATCAGCTAGTTGTGATGGATCTGTCAGAGTGTGGCAAATTTCAGATCAGACATG TGCTATTAGTTGGCCACTGCTACAAAAATGCAACGATGTGATAAATGCAAAATCAATCTGCAGACTTGCT TGGCAGCCAAAAAGTGGGAAGTTACTGGCAATTCCTGTGGAAAAATCTGTTAAGCTATATAGAAGAGAAT CTTGGAGTCATCAATTTGATCTTTCAGATAATTTCATCTCTCAGACCCTCAATATAGTAACCTGGTCTCC CTGTGGGCAATATTTAGCTGCAGGTAGTATTAATGGTCTAATCATAGTTTGGAATGTGGAAACCAAAGAC TGCATGGAAAGGGTGAAACATGAGAAAGGTTATGCAATTTGTGGTCTGGCATGGCATCCTACTTGTGGTC GAATATCGTATACTGATGCGGAAGGAAATCTAGGGCTTCTAGAGAATGTTTGTGACCCCAGTGGAAAGAC ATCAAGCAGTAAGGTATCTAGCAGAGTGGAAAAGGATTATAATGATCTTTTTGATGGAGATGATATGAGT AATGCTGGTGATTTTCTAAATGACAATGCAGTTGAGATCCCTTCTTTTTCAAAAGGGATTATAAATGATG ATGAGGATGATGAAGACCTCATGATGGCTTCAGGTCGTCCTAGACAGCGAAGTCACATCCTAGAAGATGA TGAAAACTCAGTTGATATTTCAATGCTAAAAACTGGTTCTAGTCTTCTCAAAGAGGAGGAGGAAGATGGT CAAGAAGGCAGCATTCACAATCTACCACTTGTAACATCCCAAAGGCCATTTTATGATGGACCCATGCCAA CTCCCCGGCAAAAGCCATTTCAGTCAGGTTCTACACCGTTGCATCTCACTCACAGATTCATGGTGTGGAA CTCTATTGGAATTATTCGCTGCTATAATGATGAGCAAGACAATGCCATAGATGTGGAGTTCCATGATACC TCCATACACCATGCAACACACTTATCAAACACTTTGAATTATACAATAGCAGATCTTTCCCACGAAGCTA TTTTGTTGGCATGTGAAAGCACTGATGAACTAGCAAGCAAGCTTCACTGCCTGCACTTTAGTTCTTGGGA TTCAAGCAAAGAGTGGATAATAGACTTGCCTCAGAATGAGGATATTGAAGCCATATGTCTCGGTCAAGGA TGGGCTGCTGCCGCTACTAGTGCCCTGCTTCTTCGATTGTTTACTATTGGAGGGGTTCAAAAAGAGGTAT TCAGCCTTGCTGGACCTGTGGTGTCAATGGCAGGACATGGAGAACAGCTTTTCATTGTTTATCACAGAGG TACAGGATTTGATGGGGATCAGTGCCTTGGAGTTCAACTGCTAGAGCTGGGGAAAAAGAAAAAACAAATT TTGCATGGTGACCCTCTTCCTCTTACAAGGAAATCCTACCTTGCATGGATTGGGTTTTCAGCTGAAGGTA CCCCTTGTTACGTGGATTCAGAAGGAATTGTTCGAATGCTTAACAGAGGACTTGGTAATACGTGGACTCC TATATGTAATACAAGAGAGCACTGCAAAGGAAAATCTGATCACTACTGGGTGGTTGGTATCCATGAAAAT CCCCAGCAACTAAGGTGCATTCCTTGTAAAGGTTCTCGGTTTCCCCCAACCCTTCCACGCCCTGCTGTTG CTATATTATCCTTTAAGCTTCCTTACTGTCAGATTGCAACAGAGAAAGGACAAATGGAGGAGCAATTTTG GCGTTCAGTTATATTTCACAACCACCTTGATTATTTAGCTAAAAATGGTTATGAATATGAAGAGAGCACT AAAAATCAAGCAACAAAAGAGCAACAGGAACTTTTAATGAAAATGCTTGCGCTTTCTTGTAAACTGGAGC GAGAATTCCGTTGTGTGGAACTTGCTGATCTAATGACTCAAAATGCTGTGAATTTAGCCATTAAATATGC TTCTCGCTCTCGGAAATTAATACTGGCTCAAAAACTAAGTGAACTGGCTGTAGAGAAGGCAGCCGAATTG ACAGCAACCCAGGTGGAAGAGGAAGAAGAAGAAGAAGATTTCAGAAAAAAGCTGAATGCTGGTTACAGCA ATACTGCTACAGAGTGGAGCCAACCAAGGTTCAGAAATCAAGTTGAAGAAGATGCTGAGGACAGTGGAGA AGCTGATGATGAAGAAAAACCAGAAATACATAAGCCTGGACAGAACTCGTTTTCCAAAAGTACAAATTCC TCTGATGTTTCAGCTAAGTCAGGTGCAGTTACCTTTAGCAGCCAAGGACGAGTAAATCCCTTTAAGGTAT CAGCCAGTTCCAAAGAACCAGCCATGTCAATGAATTCAGCACGTTCAACTAATATTTTAGACAATATGGG CAAATCATCCAAGAAATCCACTGCACTTAGTCGAACTACAAATAATGAAAAGTCTCCCATTATAAAGCCT CTGATTCCAAAGCCGAAGCCTAAGCAGGCATCTGCAGCATCCTATTTCCAGAAAAGAAATTCTCAAACTA ATAAAACTGAGGAAGTGAAAGAAGAAAATCTTAAAAATGTATTATCTGAAACCCCAGCTATATGTCCTCC TCAAAACACTGAAAACCAAAGGCCAAAGACCGGGTTCCAGATGTGGTTAGAAGAAAATAGAAGTAATATT TTGTCTGACAATCCTGACTTTTCAGATGAAGCAGACATAATAAAAGAAGGAATGATTCGATTTAGAGTAT TGTCAACTGAAGAAAGAAAGGTGTGGGCTAACAAAGCCAAAGGAGAAACGGCAAGTGAAGGAACTGAAGC AAAGAAGCGAAAACGTGTGGTTGATGAAAGTGATGAAACAGAAAACCAGGAAGAAAAAGCAAAAGAGAAC CTGAATTTGTCTAAAAAGCAGAAACCTTTAGATTTTTCTACAAATCAGAAACTATCAGCTTTTGCATTTA AGCAGGAGTAA
Translation (1006 aa): MDSSQQKTFRGHDAPVLSLSFDPKDIFLASASCDGSVRVWQISDQTCAISWPLLQKCNDVINAKSICRLA WQPKSGKLLAIPVEKSVKLYRRESWSHQFDLSDNFISQTLNIVTWSPCGQYLAAGSINGLIIVWNVETKD CMERVKHEKGYAICGLAWHPTCGRISYTDAEGNLGLLENVCDPSGKTSSSKVSSRVEKDYNDLFDGDDMS NAGDFLNDNAVEIPSFSKGIINDDEDDEDLMMASGRPRQRSHILEDDENSVDISMLKTGSSLLKEEEEDG QEGSIHNLPLVTSQRPFYDGPMPTPRQKPFQSGSTPLHLTHRFMVWNSIGIIRCYNDEQDNAIDVEFHDT SIHHATHLSNTLNYTIADLSHEAILLACESTDELASKLHCLHFSSWDSSKEWIIDLPQNEDIEAICLGQG WAAAATSALLLRLFTIGGVQKEVFSLAGPVVSMAGHGEQLFIVYHRGTGFDGDQCLGVQLLELGKKKKQI LHGDPLPLTRKSYLAWIGFSAEGTPCYVDSEGIVRMLNRGLGNTWTPICNTREHCKGKSDHYWVVGIHEN PQQLRCIPCKGSRFPPTLPRPAVAILSFKLPYCQIATEKGQMEEQFWRSVIFHNHLDYLAKNGYEYEEST KNQATKEQQELLMKMLALSCKLEREFRCVELADLMTQNAVNLAIKYASRSRKLILAQKLSELAVEKAAEL TATQVEEEEEEEDFRKKLNAGYSNTATEWSQPRFRNQVEEDAEDSGEADDEEKPEIHKPGQNSFSKSTNS SDVSAKSGAVTFSSQGRVNPFKVSASSKEPAMSMNSARSTNILDNMGKSSKKSTALSRTTNNEKSPIIKP LIPKPKPKQASAASYFQKRNSQTNKTEEVKEENLKNVLSETPAICPPQNTENQRPKTGFQMWLEENRSNI LSDNPDFSDEADIIKEGMIRFRVLSTEERKVWANKAKGETASEGTEAKKRKRVVDESDETENQEEKAKEN LNLSKKQKPLDFSTNQKLSAFAFKQE
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