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Report for CCDS41982.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41982.2 Public Homo sapiens 14 SERPINA9 24 110 108 CCDS HistoryNCBI Gene:327657Re-query CCDS DB by CCDS ID:41982.2Re-query CCDS DB by GeneID:327657See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 41982.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000380365.7 ENSP00000369723.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000380365.7Link to Ensembl Protein Viewer:ENSP00000369723.3Re-query CCDS DB by Nucleotide ID:ENST00000380365Re-query CCDS DB by Protein ID:ENSP00000369723
Original member Current member EBI ENST00000674397.2 ENSP00000501517.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000674397.2Link to Ensembl Protein Viewer:ENSP00000501517.1Re-query CCDS DB by Nucleotide ID:ENST00000674397Re-query CCDS DB by Protein ID:ENSP00000501517
Original member Current member NCBI NM_175739.4 NP_783866.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_175739.4Link to Protein Sequence:NP_783866.3Re-query CCDS DB by Nucleotide ID:NM_175739Re-query CCDS DB by Protein ID:NP_783866Link to BLAST:NP_783866.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_783866.3 417 Q86WD7-1 417 100% 0 0

Chromosomal Locations for CCDS 41982.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 94463093 94463296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 94464707 94464854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 94467109 94467382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 94469213 94469840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1254 nt):
ATGGCATCTTACCTTTATGGAGTACTCTTTGCTGTTGGCCTCTGTGCTCCAATCTACTGTGTGTCCCCGG
CCAATGCCCCCAGTGCATACCCCCGCCCTTCCTCCACAAAGAGCACCCCTGCCTCACAGGTGTATTCCCT
CAACACCGACTTTGCCTTCCGCCTATACCGCAGGCTGGTTTTGGAGACCCCGAGTCAGAACATCTTCTTC
TCCCCTGTGAGTGTCTCCACTTCCCTGGCCATGCTCTCCCTTGGGGCCCACTCAGTCACCAAGACCCAGA
TTCTCCAGGGCCTGGGCTTCAACCTCACACACACACCAGAGTCTGCCATCCACCAGGGCTTCCAGCACCT
GGTTCACTCACTGACTGTTCCCAGCAAAGACCTGACCTTGAAGATGGGAAGTGCCCTCTTCGTCAAGAAG
GAGCTGCAGCTGCAGGCAAATTTCTTGGGCAATGTCAAGAGGCTGTATGAAGCAGAAGTCTTTTCTACAG
ATTTCTCCAACCCCTCCATTGCCCAGGCGAGGATCAACAGCCATGTGAAAAAGAAGACCCAAGGGAAGGT
TGTAGACATAATCCAAGGCCTTGACCTTCTGACGGCCATGGTTCTGGTGAACCACATTTTCTTTAAAGCC
AAGTGGGAGAAGCCCTTTCACCCTGAATATACAAGAAAGAACTTCCCATTCCTGGTGGGCGAGCAGGTCA
CTGTGCATGTCCCCATGATGCACCAGAAAGAGCAGTTCGCTTTTGGGGTGGATACAGAGCTGAACTGCTT
TGTGCTGCAGATGGATTACAAGGGAGATGCCGTGGCCTTCTTTGTCCTCCCTAGCAAGGGCAAGATGAGG
CAACTGGAACAGGCCTTGTCAGCCAGAACACTGAGAAAGTGGAGCCACTCACTCCAGAAAAGGTGGATAG
AGGTGTTCATCCCCAGATTTTCCATTTCTGCCTCCTACAATCTGGAAACCATCCTCCCGAAGATGGGCAT
CCAAAATGTCTTTGACAAAAATGCTGATTTTTCTGGAATTGCAAAGAGAGACTCCCTGCAGGTTTCTAAA
GCAACCCACAAGGCTGTGCTGGATGTCAGTGAAGAGGGCACTGAGGCCACAGCAGCTACCACCACCAAGT
TCATAGTCCGATCGAAGGATGGCCCCTCTTACTTCACTGTCTCCTTCAATAGGACCTTCCTGATGATGAT
TACAAATAAAGCCACAGACGGTATTCTCTTTCTAGGGAAAGTGGAAAATCCCACTAAATCCTAG

Translation (417 aa):
MASYLYGVLFAVGLCAPIYCVSPANAPSAYPRPSSTKSTPASQVYSLNTDFAFRLYRRLVLETPSQNIFF
SPVSVSTSLAMLSLGAHSVTKTQILQGLGFNLTHTPESAIHQGFQHLVHSLTVPSKDLTLKMGSALFVKK
ELQLQANFLGNVKRLYEAEVFSTDFSNPSIAQARINSHVKKKTQGKVVDIIQGLDLLTAMVLVNHIFFKA
KWEKPFHPEYTRKNFPFLVGEQVTVHVPMMHQKEQFAFGVDTELNCFVLQMDYKGDAVAFFVLPSKGKMR
QLEQALSARTLRKWSHSLQKRWIEVFIPRFSISASYNLETILPKMGIQNVFDKNADFSGIAKRDSLQVSK
ATHKAVLDVSEEGTEATAATTTKFIVRSKDGPSYFTVSFNRTFLMMITNKATDGILFLGKVENPTKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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