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Report for CCDS42058.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42058.1 Public Homo sapiens 15 CCDC33 24 110 108 CCDS HistoryNCBI Gene:80125Re-query CCDS DB by CCDS ID:42058.1Re-query CCDS DB by GeneID:80125See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42058.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000398814.8 ENSP00000381795.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000398814.8Link to Ensembl Protein Viewer:ENSP00000381795.3Re-query CCDS DB by Nucleotide ID:ENST00000398814Re-query CCDS DB by Protein ID:ENSP00000381795
Original member Current member NCBI NM_025055.5 NP_079331.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_025055.5Link to Protein Sequence:NP_079331.3Re-query CCDS DB by Nucleotide ID:NM_025055Re-query CCDS DB by Protein ID:NP_079331Link to BLAST:NP_079331.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079331.3 755 Q8N5R6-6 755 100% 0 0

Chromosomal Locations for CCDS 42058.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 74236720 74236740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74243985 74244148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74262440 74262573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74266678 74266787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74268342 74268458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74271703 74271794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74272771 74272891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74279963 74280092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74280668 74280801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74281778 74281849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74295754 74295948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74330189 74330354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74330663 74330751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74330981 74331112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74331203 74331296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74332679 74332845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74333881 74333967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74334975 74335088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74335925 74336053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2268 nt):
ATGGGACTGAAAAACAAAAAGAACACTGAAGACCCAGAGGAGCCCCTGATCGCCTCCCAGAGCACGGAAC
CTGAGATCGGTCACCTGTCTCCCTCTAAGAAGGAGACCATCATGGTCACCCTCCATGGGGCTACCAACCT
GCCTGCCTGCAAGGATGGCTCCGAGCCGTGGCCCTATGTGGTGGTGAAAAGCACATCTGAGGAAAAGAAC
AATCAGAGCTCCAAGGCAGTCACATCTGTGACCTCAGAGCCCACCAGAGCCCCTATCTGGGGGGACACGG
TGAATGTGGAGATCCAAGCTGAGGATGCAGGGCAAGAAGATGTGATCCTCAAGGTGGTGGACAACAGAAA
GAAACAGGAGTTGTTGTCCTACAAAATCCCCATCAAGTACCTGCGTGTCTTCCACCCCTACCACTTTGAG
CTGGTGAAGCCCACTGAGTCTGGGAAAGCCGATGAAGCCACTGCCAAGACCCAGTTGTACGCAACAGTCG
TTCGGAAGAGCAGCTTCATACCCCGCTACATCGGCTGCAACCACATGGCTCTGGAGATCTTTCTCCGGGG
AGTCAACGAGCCCCTGGCCAACAACCCCAACCCCATAGTGGTGATTGCCCGGGTCGTTCCCAACTACAAG
GAATTTAAGGTCAGCCAGGCTAACAGGGACCTGGCCTCTGTGGGGCTGCCCATCACCCCACTGTCCTTCC
CTATCCCGTCCATGATGAACTTTGACGTGCCTCGCGTCAGCCAGAACGGATGCCCTCAGCTGTCCAAGCC
TGGGGGACCCCCAGAGCAGCCCCTGTGGAATCAGTCCTTCCTCTTCCAAGGCCGAGATGGAGCTACCAGC
TTCTCAGAAGACACAGCCCTGGTGCTGGAGTACTACTCCTCAACTTCAATGAAAGGCAGCCAGCCGTGGA
CCCTCAACCAGCCCCTGGGCATCTCTGTGTTGCCGCTAAAGAGCCGTTTGTACCAGAAGATGCTGACAGG
GAAAGGCTTGGACGGGCTTCACGTGGAGCGGCTCCCCATCATGGACACCAGCCTGAAAACTATCAATGAT
GAGGCCCCCACAGTGGCTCTCTCCTTCCAGCTGCTTTCCTCTGAGAGACCAGAAAACTTCTTGACACCAA
ACAACAGCAAGGCTCTTCCTACCTTGGACCCCAAGATCCTGGATAAGAAGCTGAGAACCATCCAAGAGTC
CTGGTCCAAGGACACAGTGAGCTCCACAATGGACTTGAGCACGTCCACTCCACGAGAAGCAGAGGAGGAA
CCTCTGGTGCCTGAGATGTCCCATGACACAGAGATGAACAACTACCGGCGGGCCATGCAGAAGATGGCAG
AGGACATCCTGTCTCTGCGGAGACAGGCCAGCATCCTGGAAGGAGAGAACCGCATACTGAGGAGCCGCCT
GGCCCAGCAGGAGGAGGAAGAGGGGCAGGGCAAAGCCAGTGAGGCCCAGAACACGGTGTCCATGAAGCAG
AAACTGCTGCTGAGTGAGCTGGATATGAAGAAACTGAGGGACAGGGTGCAGCATTTGCAGAATGAGCTGA
TTCGAAAGAATGATCGAGAGAAGGAGCTGCTCCTTCTGTATCAGGCCCAGCAGCCACAGGCCGCTCTGCT
GAAGCAGTACCAGGGCAAGCTGCAGAAGATGAAGGCGCTGGAGGAGACTGTGCGGCACCAAGAGAAGGTG
ATCGAGAAGATGGAGCGGGTGCTGGAGGACAGGCTGCAGGACAGGAGCAAGCCCCCTCCTCTGAACAGGC
AGCAGGGAAAGCCCTACACGGGCTTCCCTATGCTCTCAGCCTCTGGCCTTCCCTTGGGTTCTATGGGAGA
GAACCTGCCGGTTGAACTTTACTCGGTGCTGCTGGCAGAAAACGCGAAGCTGCGGACGGAGCTGGATAAG
AACCGCCACCAGCAGGCCCCCATCATTCTGCAGCAACAGGCCCTGCCGGATCTCCTCTCTGGTACTTCAG
ACAAGTTCAACCTCCTGGCCAAGCTGGAACACGCTCAGAGCCGGATCCTGTCCCTGGAAAGCCAGTTAGA
GGACTCAGCTCGACGCTGGGGACGAGAGAAGCAGGATCTGGCCACACGGCTGCAGGAGCAAGAAAAAGGT
TTCAGGCACCCCTCGAACTCCATCATCATAGAACAGCCTAGTGCCCTCACCCACTCCATGGACCTCAAGC
AGCCCTCAGAGCTGGAGCCCCTGCTGCCCAGCTCAGACTCTAAGCTCAACAAGCCCTTGAGCCCCCAGAA
GGAGACCGCTAACTCTCAGCAGACCTGA

Translation (755 aa):
MGLKNKKNTEDPEEPLIASQSTEPEIGHLSPSKKETIMVTLHGATNLPACKDGSEPWPYVVVKSTSEEKN
NQSSKAVTSVTSEPTRAPIWGDTVNVEIQAEDAGQEDVILKVVDNRKKQELLSYKIPIKYLRVFHPYHFE
LVKPTESGKADEATAKTQLYATVVRKSSFIPRYIGCNHMALEIFLRGVNEPLANNPNPIVVIARVVPNYK
EFKVSQANRDLASVGLPITPLSFPIPSMMNFDVPRVSQNGCPQLSKPGGPPEQPLWNQSFLFQGRDGATS
FSEDTALVLEYYSSTSMKGSQPWTLNQPLGISVLPLKSRLYQKMLTGKGLDGLHVERLPIMDTSLKTIND
EAPTVALSFQLLSSERPENFLTPNNSKALPTLDPKILDKKLRTIQESWSKDTVSSTMDLSTSTPREAEEE
PLVPEMSHDTEMNNYRRAMQKMAEDILSLRRQASILEGENRILRSRLAQQEEEEGQGKASEAQNTVSMKQ
KLLLSELDMKKLRDRVQHLQNELIRKNDREKELLLLYQAQQPQAALLKQYQGKLQKMKALEETVRHQEKV
IEKMERVLEDRLQDRSKPPPLNRQQGKPYTGFPMLSASGLPLGSMGENLPVELYSVLLAENAKLRTELDK
NRHQQAPIILQQQALPDLLSGTSDKFNLLAKLEHAQSRILSLESQLEDSARRWGREKQDLATRLQEQEKG
FRHPSNSIIIEQPSALTHSMDLKQPSELEPLLPSSDSKLNKPLSPQKETANSQQT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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