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Report for CCDS42063.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42063.1 Public Homo sapiens 15 HYKK 24 110 108 CCDS HistoryNCBI Gene:123688Re-query CCDS DB by CCDS ID:42063.1Re-query CCDS DB by GeneID:123688See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42063.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000388988.9 ENSP00000373640.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000388988.9Link to Ensembl Protein Viewer:ENSP00000373640.4Re-query CCDS DB by Nucleotide ID:ENST00000388988Re-query CCDS DB by Protein ID:ENSP00000373640
Original member Current member EBI ENST00000569878.5 ENSP00000455459.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000569878.5Link to Ensembl Protein Viewer:ENSP00000455459.1Re-query CCDS DB by Nucleotide ID:ENST00000569878Re-query CCDS DB by Protein ID:ENSP00000455459
Original member Current member NCBI NM_001013619.4 NP_001013641.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001013619.4Link to Protein Sequence:NP_001013641.2Re-query CCDS DB by Nucleotide ID:NM_001013619Re-query CCDS DB by Protein ID:NP_001013641Link to BLAST:NP_001013641.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001013641.2 373 A2RU49-1 373 100% 0 0

Chromosomal Locations for CCDS 42063.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 78513089 78513425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78514968 78515107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78527380 78527563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78533210 78533670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1122 nt):
ATGTCAAGTGGAAACTATCAGCAGTCAGAGGCTCTTAGCAAACCCACTTTCAGTGAGGAACAAGCCTCTG
CGTTAGTGGAGTCAGTGTTTGGGTTGAAAGTTTCCAAGGTCCGGCCACTTCCTAGCTATGATGACCAAAA
CTTTCATGTCTACGTTTCAAAAACCAAAGATGGCCCAACTGAATATGTCCTCAAAATAAGCAACACCAAG
GCTAGCAAAAATCCAGACCTGATTGAAGTGCAGAATCACATCATCATGTTTCTGAAAGCCGCTGGATTTC
CAACAGCCTCTGTGTGTCACACTAAAGGAGACAACACAGCTTCTCTCGTGTCTGTAGATAGTGGCTCTGA
AATCAAAAGCTACTTGGTGAGGCTGCTGACTTACCTCCCAGGAAGACCCATCGCTGAGCTTCCCGTCAGC
CCCCAGCTATTGTATGAAATTGGAAAACTAGCTGCCAAATTGGATAAGACACTGCAGAGATTCCATCACC
CAAAGTTAAGTAGTCTTCATCGGGAGAACTTCATCTGGAATCTGAAAAATGTTCCTCTTCTGGAGAAATA
CCTGTATGCCCTGGGCCAGAATCGAAACCGAGAGATTGTTGAGCATGTCATTCATCTGTTCAAGGAGGAA
GTAATGACCAAATTAAGTCATTTTCGAGAATGTATCAATCACGGAGATCTTAATGACCATAATATTTTAA
TAGAGTCCAGCAAGTCAGCCTCTGGAAATGCTGAATATCAAGTGTCTGGGATTTTAGACTTTGGTGACAT
GAGCTATGGCTACTATGTGTTTGAAGTGGCAATTACCATCATGTACATGATGATTGAGAGCAAGAGTCCT
ATACAAGTAGGAGGCCATGTCCTTGCAGGGTTTGAAAGCATCACCCCACTGACAGCTGTAGAGAAGGGTG
CTTTGTTTTTACTTGTATGCAGTCGTTTTTGTCAGTCACTTGTCATGGCTGCATACTCTTGCCAGCTATA
CCCAGAGAACAAAGACTATCTCATGGTTACTGCAAAAACCGGGTGGAAACACTTACAGCAAATGTTTGAC
ATGGGTCAGAAAGCTGTAGAAGAAATCTGGTTTGAAACTGCCAAATCCTATGAATCTGGGATCTCCATGT
GA

Translation (373 aa):
MSSGNYQQSEALSKPTFSEEQASALVESVFGLKVSKVRPLPSYDDQNFHVYVSKTKDGPTEYVLKISNTK
ASKNPDLIEVQNHIIMFLKAAGFPTASVCHTKGDNTASLVSVDSGSEIKSYLVRLLTYLPGRPIAELPVS
PQLLYEIGKLAAKLDKTLQRFHHPKLSSLHRENFIWNLKNVPLLEKYLYALGQNRNREIVEHVIHLFKEE
VMTKLSHFRECINHGDLNDHNILIESSKSASGNAEYQVSGILDFGDMSYGYYVFEVAITIMYMMIESKSP
IQVGGHVLAGFESITPLTAVEKGALFLLVCSRFCQSLVMAAYSCQLYPENKDYLMVTAKTGWKHLQQMFD
MGQKAVEEIWFETAKSYESGISM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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