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Report for CCDS42119.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42119.1 Public Homo sapiens 16 CPPED1 24 110 108 CCDS HistoryNCBI Gene:55313Re-query CCDS DB by CCDS ID:42119.1Re-query CCDS DB by GeneID:55313See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42119.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000433677.6 ENSP00000411127.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000433677.6Link to Ensembl Protein Viewer:ENSP00000411127.2Re-query CCDS DB by Nucleotide ID:ENST00000433677Re-query CCDS DB by Protein ID:ENSP00000411127
Original member Current member NCBI NM_001099455.2 NP_001092925.1 Accepted alive Link to Nucleotide Sequence:NM_001099455.2Link to Protein Sequence:NP_001092925.1Re-query CCDS DB by Nucleotide ID:NM_001099455Re-query CCDS DB by Protein ID:NP_001092925Link to BLAST:NP_001092925.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001092925.1 172 Q9BRF8-2 172 100% 0 0

Chromosomal Locations for CCDS 42119.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 12664886 12665115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 12781185 12781403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 12803707 12803776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (519 nt):
ATGTCGGCTGCAGAGGCGGGGGGTGTTTTCCACAGAGCCAGGGGCAGGACCCTGGCCGCGTTTCCCGCAG
AAAAGGAAAGCGAATGGAAAGGCCCATTCTACTTCATCCTGGGCGCAGACCCACAGTTTGGGCTGATCAA
GGCCTGGTCCACTGGGGACTGTGACAATGGCGGTGACGAATGGGAACAGGAGATCCGTCTAACTGAGCAA
GCCGTCCAGGCCATCAACAAGCTGAACCCCAAACCCAAATTCTTCGTTCTGTGCGGCGACCTCATCCACG
CCATGCCAGGTGTCAAAGTCGTGTTCTCAGGCCACTACCACAGGAATGCCGGGGGTACCTACCAGAACCT
CGACATGGTGGTGTCATCTGCCATTGGATGCCAGCTGGGCAGAGACCCCCACGGGCTCCGAGTCGTGGTG
GTCACCGCCGAGAAAATTGTTCACCGATACTACAGTCTAGATGAGCTGAGTGAGAAAGGAATAGAAGACG
ATCTCATGGATTTGATCAAGAAAAAATGA

Translation (172 aa):
MSAAEAGGVFHRARGRTLAAFPAEKESEWKGPFYFILGADPQFGLIKAWSTGDCDNGGDEWEQEIRLTEQ
AVQAINKLNPKPKFFVLCGDLIHAMPGVKVVFSGHYHRNAGGTYQNLDMVVSSAIGCQLGRDPHGLRVVV
VTAEKIVHRYYSLDELSEKGIEDDLMDLIKKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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