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Report for CCDS42374.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42374.1 Public Homo sapiens 17 HELZ 24 110 108 CCDS HistoryNCBI Gene:9931Re-query CCDS DB by CCDS ID:42374.1Re-query CCDS DB by GeneID:9931See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42374.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000358691.10 ENSP00000351524.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000358691.10Link to Ensembl Protein Viewer:ENSP00000351524.5Re-query CCDS DB by Nucleotide ID:ENST00000358691Re-query CCDS DB by Protein ID:ENSP00000351524
Original member Current member NCBI NM_014877.4 NP_055692.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014877.4Link to Protein Sequence:NP_055692.3Re-query CCDS DB by Nucleotide ID:NM_014877Re-query CCDS DB by Protein ID:NP_055692Link to BLAST:NP_055692.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055692.3 1942 P42694-1 1942 100% 0 0

Chromosomal Locations for CCDS 42374.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 67078252 67078586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 67086829 67087081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 67107169 67107685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 67108492 67108726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 67109116 67109686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 67114324 67114403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 67120405 67120612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 67122970 67123160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 67123963 67124014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 67128651 67128855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 67135970 67136198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 67137931 67138114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 67145743 67145890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 67148569 67148714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 67149867 67149985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 67151046 67151224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 67160261 67160362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 67160897 67161076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 67166478 67166608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 67167463 67167796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 67178659 67178926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 67188319 67188616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 67189589 67189696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 67190157 67190355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 67193967 67194042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 67195419 67195470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 67201129 67201185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 67203319 67203443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 67215899 67215935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 67218595 67218804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5829 nt):
ATGGAAGACAGAAGAGCTGAAAAGTCATGTGAACAAGCATGTGAATCACTTAAGAGGCAGGACTATGAAA
TGGCCCTCAAGCACTGCACAGAGGCCCTTCTTTCTCTTGGCCAGTACTCCATGGCAGACTTCACAGGGCC
TTGTCCATTGGAAATAGAACGCATCAAAATCGAGAGTCTTCTCTACAGAATTGCCTCATTTTTGCAACTG
AAAAATTATGTGCAAGCTGATGAAGATTGTAGACATGTGCTGGGAGAAGGACTGGCCAAGGGAGAAGATG
CCTTTCGGGCAGTGCTTTGCTGCATGCAGCTGAAAGGGAAGCTCCAACCTGTATCCACCATTCTTGCCAA
GTCACTCACAGGAGAGTCCCTGAATGGGATGGTAACAAAGGATTTGACAAGACTAAAAACACTTCTCTCA
GAAACAGAGACAGCAACTAGTAACGCCCTCTCTGGATATCACGTGGAAGACTTAGATGAGGGGTCTTGTA
ATGGTTGGCATTTCCGCCCACCACCTAGGGGAATCACAAGCAGCGAGGAATATACTTTGTGTAAAAGATT
TTTAGAACAAGGAATCTGTAGGTATGGTGCCCAGTGTACTTCAGCACATTCCCAGGAAGAACTAGCAGAA
TGGCAGAAAAGATATGCTTCACGGCTGATAAAATTGAAACAGCAAAATGAGAATAAACAGCTCTCAGGCA
GTTACATGGAAACCTTGATAGAAAAGTGGATGAATTCATTGTCTCCTGAGAAAGTGCTTAGTGAATGTAT
AGAAGGAGTAAAGGTAGAGCACAATCCTGACCTGTCAGTTACTGTCAGCACCAAAAAATCCCACCAGACA
TGGACCTTTGCTCTCACTTGTAAGCCTGCAAGAATGCTGTATCGTGTAGCATTGCTTTATGATGCTCATC
GTCCTCATTTTAGTATCATTGCAATATCTGCCGGAGATAGTACTACCCAGGTATCACAAGAAGTCCCAGA
AAACTGTCAAGAATGGATAGGAGGAAAGATGGCCCAAAATGGATTAGATCATTACGTGTATAAAGTCGGG
ATAGCATTTAACACAGAAATATTTGGAACTTTTCGCCAAACCATAGTTTTCGACTTTGGATTGGAACCAG
TACTCATGCAAAGAGTAATGATTGATGCAGCTTCTACAGAAGATCTCGAATACCTGATGCATGCAAAACA
GCAGCTAGTAACCACAGCTAAACGTTGGGATTCTTCCTCTAAGACTATTATAGATTTTGAACCTAATGAA
ACTACTGATTTGGAGAAGAGCCTTCTTATCAGATACCAAATTCCCCTCTCTGCTGACCAGCTATTTACTC
AGTCCGTTTTAGACAAATCATTGACCAAGAGCAACTATCAGTCACGGTTACATGACCTTCTTTATATTGA
GGAGATAGCCCAGTATAAAGAAATCAGCAAGTTCAACCTTAAAGTGCAATTGCAGATTCTGGCAAGCTTC
ATGCTCACTGGTGTTTCTGGAGGTGCAAAGTATGCTCAGAATGGACAACTTTTTGGTCGCTTTAAGCTTA
CTGAAACACTTTCTGAAGATACTTTGGCTGGACGACTGGTGATGACCAAAGTCAATGCTGTTTATTTATT
ACCAGTCCCTAAACAGAAGTTAGTACAGACCCAGGGAACCAAAGAGAAGGTTTATGAAGCTACTATTGAA
GAAAAAACAAAGGAATATATATTTTTAAGGCTATCTAGGGAATGCTGTGAAGAACTTAATCTTCGGCCTG
ACTGTGACACACAGGTTGAACTTCAGTTTCAATTAAATCGATTACCCCTCTGTGAAATGCACTATGCACT
AGACAGGATCAAGGACAATGGGGTTTTGTTTCCAGACATCAGTATGACTCCCACCATACCATGGAGTCCT
AACAGACAATGGGATGAACAGTTGGATCCTCGACTAAATGCAAAACAGAAAGAGGCTGTTCTGGCCATTA
CCACTCCACTTGCAATCCAGCTGCCGCCTGTGCTTATCATCGGACCCTATGGGACAGGCAAAACGTTCAC
TCTAGCTCAGGCTGTCAAACATATTCTGCAGCAACAGGAGACTAGGATTCTCATTTGCACCCATTCTAAT
AGTGCTGCTGATCTCTACATAAAGGATTATTTACATCCATATGTAGAAGCAGGCAATCCCCAGGCAAGAC
CTCTCAGGGTATATTTCAGAAATCGCTGGGTAAAGACTGTCCACCCAGTTGTGCATCAGTACTGTTTGAT
CTCAAGCGCACATTCCACCTTTCAGATGCCCCAGAAAGAAGATATTCTTAAACATCGAGTGGTGGTTGTT
ACCTTGAATACTTCCCAGTACCTCTGTCAGTTGGACCTTGAACCTGGGTTTTTTACACACATTCTATTAG
ATGAAGCTGCCCAGGCCATGGAGTGTGAAACCATTATGCCTCTAGCATTAGCAACTCAAAACACTCGGAT
TGTCTTGGCTGGTGATCACATGCAGCTCAGTCCTTTTGTTTACAGCGAGTTTGCCAGGGAGAGAAACCTT
CACGTTTCATTACTTGACCGACTCTATGAGCATTACCCTGCTGAGTTCCCATGTAGGATTCTCCTGTGTG
AGAACTACCGCTCCCATGAAGCTATCATCAATTATACCTCTGAGCTTTTCTATGAGGGCAAACTGATGGC
CAGTGGGAAGCAGCCAGCACACAAAGATTTCTACCCACTAACTTTCTTTACAGCACGAGGAGAAGATGTA
CAAGAAAAAAATAGCACAGCTTTTTATAATAATGCAGAGGTGTTTGAAGTGGTGGAACGTGTAGAAGAGT
TAAGAAGGAAGTGGCCAGTAGCGTGGGGGAAGTTAGATGATGGCAGTATTGGTGTGGTGACTCCATATGC
TGATCAAGTGTTTAGAATACGTGCTGAACTTCGAAAAAAGAGATTATCTGATGTTAATGTAGAAAGGGTG
CTAAATGTTCAAGGAAAGCAATTCAGAGTTTTGTTTCTTAGCACAGTACGTACAAGACATACTTGTAAAC
ATAAACAGACACCAATTAAAAAGAAAGAGCAACTTCTGGAAGATTCCACAGAGGACTTAGATTATGGTTT
TTTATCTAACTACAAGCTTCTCAATACTGCCATCACAAGAGCACAATCCCTGGTTGCTGTGGTGGGTGAT
CCCATTGCTCTGTGCTCTATTGGAAGATGCAGGAAATTTTGGGAACGGTTTATTGCCCTGTGTCATGAAA
ACAGTAGCCTACATGGAATCACTTTTGAACAGATCAAAGCCCAGTTAGAGGCTTTAGAACTAAAGAAGAC
ATATGTGTTGAATCCGCTGGCACCTGAATTTATCCCCCGGGCTCTAAGACTGCAGCATTCAGGAAGTACC
AACAAACAGCAGCAATCACCACCCAAGGGGAAAAGTCTTCATCATACCCAGAATGATCACTTCCAGAATG
ATGGAATTGTTCAGCCCAATCCTTCTGTACTTATTGGCAATCCTATTAGAGCATATACTCCTCCACCCCC
TCTTGGACCTCACCCAAATTTGGGAAAATCTCCAAGCCCTGTTCAAAGAATAGATCCTCACACTGGGACA
AGTATTCTTTATGTACCTGCTGTCTATGGAGGGAATGTAGTTATGTCGGTGCCTTTACCTGTACCATGGA
CAGGATACCAGGGTAGGTTTGCAGTTGATCCTCGAATTATTACACATCAGGCAGCAATGGCCTATAACAT
GAACCTATTACAGACACATGGACGAGGATCTCCTATTCCTTATGGCCTTGGACATCACCCACCTGTCACC
ATAGGCCAGCCACAAAATCAGCATCAGGAGAAGGATCAACATGAGCAAAATCGAAATGGTAAAAGTGATA
CAAATAATTCCGGACCTGAAATTAATAAGATTCGAACACCAGAGAAAAAGCCAACAGAACCAAAACAGGT
TGATTTGGAATCAAATCCACAGAACAGAAGTCCTGAATCACGTCCTAGTGTTGTTTATCCCAGTACCAAA
TTTCCTCGCAAAGATAATCTCAACCCAAGACACATAAATCTTCCCCTTCCTGCTCCCCACGCACAGTATG
CAATCCCTAATCGCCACTTTCATCCCCTTCCCCAGCTACCAAGACCACCCTTTCCAATTCCACAGCAGCA
CACCTTGTTAAATCAGCAGCAGAATAATTTGCCTGAACAACCAAATCAGATACCACCTCAGCCAAATCAG
GTAGTCCAGCAGCAAAGTCAGTTGAATCAGCAGCCTCAGCAGCCACCTCCTCAGCTTTCTCCTGCATATC
AGGCGGGACCCAACAATGCTTTTTTTAATAGTGCAGTTGCTCATCGGCCACAGTCTCCTCCTGCAGAAGC
TGTAATTCCGGAGCAGCAGCCCCCTCCCATGCTGCAAGAAGGCCACAGTCCTCTGAGAGCCATTGCACAA
CCCGGCCCCATTCTTCCTTCACATCTGAATAGCTTCATTGATGAGAACCCCTCGGGATTACCTATAGGGG
AGGCTTTAGATCGTATACATGGGAGTGTCGCTCTGGAAACATTAAGGCAGCAGCAGGCACGGTTCCAGCA
GTGGAGCGAGCATCATGCCTTTCTCAGTCAGGGCAGCGCTCCATACCCACACCATCACCATCCTCACCTC
CAGCATCTTCCTCAGCCGCCCCTGGGATTACATCAGCCGCCAGTGAGGGCAGACTGGAAGCTCACCAGCA
GTGCCGAAGATGAAGTGGAGACCACATACTCAAGGTTTCAAGACTTAATCAGAGAACTGTCTCATCGTGA
TCAAAGTGAAACACGGGAACTAGCTGAAATGCCACCACCTCAATCAAGACTTTTGCAATATAGACAAGTA
CAGAGTAGAAGCCCACCAGCAGTCCCATCTCCCCCATCCAGTACAGACCACAGTAGCCACTTTTCTAACT
TTAATGATAACAGCAGAGACATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCCCAGAT
ATTCAACTCACCTTTCTCGTTGCCATCTGAACACCTTGCCCCTCCTCCCTTGAAATACCTGGCACCTGAT
GGAGCATGGACTTTTGCTAACTTGCAACAGAATCACCTAATGGGGCCAGGTTTTCCCTATGGCCTACCTC
CATTGCCTCACAGGCCACCGCAGAACCCTTTTGTACAAATACAGAATCATCAACATGCTATTGGTCAAGA
GCCATTTCACCCATTGTCATCTCGAACAGTATCTTCTTCTTCGCTCCCTAGCTTAGAAGAGTATGAGCCC
AGAGGACCTGGTCGGCCCTTGTACCAAAGAAGAATCTCATCTAGCTCAGTTCAACCTTGTTCTGAAGAAG
TAAGCACTCCTCAAGACAGTCTGGCTCAGTGTAAAGAGCTTCAGGACCACAGTAACCAATCTTCTTTCAA
CTTTTCATCCCCGGAGTCCTGGGTAAACACCACCTCATCTACTCCTTATCAGAACATTCCGTGCAATGGA
TCCAGCAGGACAGCTCAGCCCAGAGAGTTGATAGCGCCACCCAAGACTGTCAAACCCCCTGAGGATCAAC
TGAAGTCGGAGAACCTCGAGGTGTCCAGTTCCTTCAACTACAGTGTGCTGCAGCATCTTGGCCAGTTTCC
ACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAATAGCAGTAGCCCCCAGAGCTCTGCGGGGGGC
AAGCCCGCCATGTCCTATGCCAGCGCTCTGCGGGCCCCTCCAAAGCCCAGGCCCCCTCCTGAGCAGGCCA
AGAAGAGTAGCGACCCTCTGTCTCTCTTCCAGGAACTGAGCCTAGGGAGCTCATCTGGCAGCAATGGCTT
TTACTCATATTTTAAATAA

Translation (1942 aa):
MEDRRAEKSCEQACESLKRQDYEMALKHCTEALLSLGQYSMADFTGPCPLEIERIKIESLLYRIASFLQL
KNYVQADEDCRHVLGEGLAKGEDAFRAVLCCMQLKGKLQPVSTILAKSLTGESLNGMVTKDLTRLKTLLS
ETETATSNALSGYHVEDLDEGSCNGWHFRPPPRGITSSEEYTLCKRFLEQGICRYGAQCTSAHSQEELAE
WQKRYASRLIKLKQQNENKQLSGSYMETLIEKWMNSLSPEKVLSECIEGVKVEHNPDLSVTVSTKKSHQT
WTFALTCKPARMLYRVALLYDAHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKMAQNGLDHYVYKVG
IAFNTEIFGTFRQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTAKRWDSSSKTIIDFEPNE
TTDLEKSLLIRYQIPLSADQLFTQSVLDKSLTKSNYQSRLHDLLYIEEIAQYKEISKFNLKVQLQILASF
MLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVPKQKLVQTQGTKEKVYEATIE
EKTKEYIFLRLSRECCEELNLRPDCDTQVELQFQLNRLPLCEMHYALDRIKDNGVLFPDISMTPTIPWSP
NRQWDEQLDPRLNAKQKEAVLAITTPLAIQLPPVLIIGPYGTGKTFTLAQAVKHILQQQETRILICTHSN
SAADLYIKDYLHPYVEAGNPQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVV
TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFVYSEFARERNL
HVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYPLTFFTARGEDV
QEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQVFRIRAELRKKRLSDVNVERV
LNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGD
PIALCSIGRCRKFWERFIALCHENSSLHGITFEQIKAQLEALELKKTYVLNPLAPEFIPRALRLQHSGST
NKQQQSPPKGKSLHHTQNDHFQNDGIVQPNPSVLIGNPIRAYTPPPPLGPHPNLGKSPSPVQRIDPHTGT
SILYVPAVYGGNVVMSVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQTHGRGSPIPYGLGHHPPVT
IGQPQNQHQEKDQHEQNRNGKSDTNNSGPEINKIRTPEKKPTEPKQVDLESNPQNRSPESRPSVVYPSTK
FPRKDNLNPRHINLPLPAPHAQYAIPNRHFHPLPQLPRPPFPIPQQHTLLNQQQNNLPEQPNQIPPQPNQ
VVQQQSQLNQQPQQPPPQLSPAYQAGPNNAFFNSAVAHRPQSPPAEAVIPEQQPPPMLQEGHSPLRAIAQ
PGPILPSHLNSFIDENPSGLPIGEALDRIHGSVALETLRQQQARFQQWSEHHAFLSQGSAPYPHHHHPHL
QHLPQPPLGLHQPPVRADWKLTSSAEDEVETTYSRFQDLIRELSHRDQSETRELAEMPPPQSRLLQYRQV
QSRSPPAVPSPPSSTDHSSHFSNFNDNSRDIEVASNPAFPQRLPPQIFNSPFSLPSEHLAPPPLKYLAPD
GAWTFANLQQNHLMGPGFPYGLPPLPHRPPQNPFVQIQNHQHAIGQEPFHPLSSRTVSSSSLPSLEEYEP
RGPGRPLYQRRISSSSVQPCSEEVSTPQDSLAQCKELQDHSNQSSFNFSSPESWVNTTSSTPYQNIPCNG
SSRTAQPRELIAPPKTVKPPEDQLKSENLEVSSSFNYSVLQHLGQFPPLMPNKQIAESANSSSPQSSAGG
KPAMSYASALRAPPKPRPPPEQAKKSSDPLSLFQELSLGSSSGSNGFYSYFK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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