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Report for CCDS42674.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42674.1 Public Homo sapiens 2 KCNG3 24 110 108 CCDS HistoryNCBI Gene:170850Re-query CCDS DB by CCDS ID:42674.1Re-query CCDS DB by GeneID:170850See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42674.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000394973.4 ENSP00000378424.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000394973.4Link to Ensembl Protein Viewer:ENSP00000378424.4Re-query CCDS DB by Nucleotide ID:ENST00000394973Re-query CCDS DB by Protein ID:ENSP00000378424
Original member Current member NCBI NM_172344.3 NP_758847.1 Accepted alive Link to Nucleotide Sequence:NM_172344.3Link to Protein Sequence:NP_758847.1Re-query CCDS DB by Nucleotide ID:NM_172344Re-query CCDS DB by Protein ID:NP_758847Link to BLAST:NP_758847.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_758847.1 425 Q8TAE7-2 425 100% 0 0

Chromosomal Locations for CCDS 42674.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 42443934 42444579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 42492870 42493501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1278 nt):
ATGACCTTCGGGCGCAGCGGGGCGGCCTCGGTGGTGCTGAACGTGGGCGGCGCCCGGTATTCGCTGTCCC
GGGAGCTGCTGAAGGACTTCCCGCTGCGCCGCGTGAGCCGGCTGCACGGCTGCCGCTCCGAGCGCGACGT
GCTCGAGGTGTGCGACGACTACGACCGCGAGCGCAACGAGTACTTCTTCGACCGGCACTCGGAGGCCTTC
GGCTTCATCCTGCTCTACGTGCGCGGCCACGGCAAGCTGCGCTTCGCGCCGCGGATGTGCGAGCTCTCCT
TCTACAACGAGATGATCTACTGGGGCCTGGAGGGCGCGCACCTCGAGTACTGCTGCCAGCGCCGCCTCGA
CGACCGCATGTCCGACACCTACACCTTCTACTCGGCCGACGAGCCGGGCGTGCTGGGCCGCGACGAGGCG
CGCCCCGGCGGGGCCGAGGCGGCTCCCTCCAGGCGCTGGCTGGAGCGCATGCGGCGGACCTTCGAGGAGC
CCACGTCGTCGCTGGCCGCGCAGATCCTGGCTAGCGTGTCGGTGGTGTTCGTGATCGTGTCCATGGTGGT
GCTGTGCGCCAGCACGTTGCCCGACTGGCGCAACGCAGCCGCCGACAACCGCAGCCTGGATGACCGGAGC
AGGATAATTGAAGCTATCTGCATAGGTTGGTTCACTGCCGAGTGCATCGTGAGGTTCATTGTCTCCAAAA
ACAAGTGTGAGTTTGTCAAGAGACCCCTGAACATCATTGATTTACTGGCAATCACGCCGTATTACATCTC
TGTGTTGATGACAGTGTTTACAGGCGAGAACTCTCAACTCCAGAGGGCTGGAGTCACCTTGAGGGTACTT
AGAATGATGAGGATTTTTTGGGTGATTAAGCTTGCCCGTCACTTCATTGGTCTTCAGACACTCGGTTTGA
CTCTCAAACGTTGCTACCGAGAGATGGTTATGTTACTTGTCTTCATTTGTGTTGCCATGGCAATCTTTAG
TGCACTTTCTCAGCTTCTTGAACATGGGCTGGACCTGGAAACATCCAACAAGGACTTTACCAGCATTCCT
GCTGCCTGCTGGTGGGTGATTATCTCTATGACTACAGTTGGCTATGGAGATATGTATCCTATCACAGTGC
CTGGAAGAATTCTTGGAGGAGTTTGTGTTGTCAGTGGAATTGTTCTATTGGCATTACCTATCACTTTTAT
CTACCATAGCTTTGTGCAGTGTTATCATGAGCTCAAGTTTAGATCTGCTAGGTATAGTAGGAGCCTCTCC
ACTGAATTCCTGAATTAA

Translation (425 aa):
MTFGRSGAASVVLNVGGARYSLSRELLKDFPLRRVSRLHGCRSERDVLEVCDDYDRERNEYFFDRHSEAF
GFILLYVRGHGKLRFAPRMCELSFYNEMIYWGLEGAHLEYCCQRRLDDRMSDTYTFYSADEPGVLGRDEA
RPGGAEAAPSRRWLERMRRTFEEPTSSLAAQILASVSVVFVIVSMVVLCASTLPDWRNAAADNRSLDDRS
RIIEAICIGWFTAECIVRFIVSKNKCEFVKRPLNIIDLLAITPYYISVLMTVFTGENSQLQRAGVTLRVL
RMMRIFWVIKLARHFIGLQTLGLTLKRCYREMVMLLVFICVAMAIFSALSQLLEHGLDLETSNKDFTSIP
AACWWVIISMTTVGYGDMYPITVPGRILGGVCVVSGIVLLALPITFIYHSFVQCYHELKFRSARYSRSLS
TEFLN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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