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Report for CCDS42700.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42700.1 Public Homo sapiens 2 MOGS 24 110 108 CCDS HistoryNCBI Gene:7841Re-query CCDS DB by CCDS ID:42700.1Re-query CCDS DB by GeneID:7841See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42700.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000448666.7 ENSP00000410992.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000448666.7Link to Ensembl Protein Viewer:ENSP00000410992.3Re-query CCDS DB by Nucleotide ID:ENST00000448666Re-query CCDS DB by Protein ID:ENSP00000410992
Original member Current member NCBI NM_006302.3 NP_006293.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006302.3Link to Protein Sequence:NP_006293.2Re-query CCDS DB by Nucleotide ID:NM_006302Re-query CCDS DB by Protein ID:NP_006293Link to BLAST:NP_006293.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006293.2 837 Q13724-1 837 100% 0 0

Chromosomal Locations for CCDS 42700.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 74461275 74463012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 74463190 74463386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 74464496 74464722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 74464896 74465247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2514 nt):
ATGGCTCGGGGCGAGCGGCGGCGCCGCGCAGTGCCGGCAGAGGGAGTGCGGACAGCCGAGAGGGCGGCTC
GG
GGAGGCCCCGGGCGACGGGACGGCCGGGGCGGCGGGCCGCGTAGCACGGCTGGAGGAGTGGCTCTGGC
C
GTCGTGGTCCTGTCTTTGGCCCTGGGTATGTCGGGGCGCTGGGTGCTGGCGTGGTACCGTGCGCGGCGG
GCG
GTCACGCTGCACTCCGCGCCTCCTGTGTTGCCTGCCGACTCCTCCAGCCCCGCCGTGGCCCCGGACC
TC
TTCTGGGGAACCTACCGCCCTCACGTCTACTTCGGCATGAAGACCCGCAGCCCGAAGCCCCTCCTCAC
C
GGACTGATGTGGGCGCAGCAGGGCACCACCCCGGGGACTCCTAAGCTCAGGCACACGTGTGAGCAGGGG
GAC
GGTGTGGGTCCCTATGGCTGGGAGTTCCACGACGGCCTCTCCTTCGGGCGCCAACACATCCAGGATG
GG
GCCTTAAGGCTCACCACTGAGTTCGTCAAGAGGCCTGGGGGTCAGCACGGAGGGGACTGGAGCTGGAG
A
GTGACTGTAGAGCCTCAGGACTCAGGTACTTCTGCCCTCCCTTTGGTCTCCCTGTTCTTCTATGTGGTG
ACA
GATGGCAAGGAAGTCCTACTACCAGAGGTTGGGGCCAAGGGGCAGTTGAAGTTTATCAGTGGGCACA
CC
AGTGAACTTGGTGACTTCCGCTTTACACTTTTGCCACCAACCAGTCCAGGGGATACAGCCCCCAAGTA
T
GGCAGCTACAATGTCTTCTGGACCTCCAACCCAGGACTGCCCCTGCTGACAGAGATGGTAAAGAGTCGC
CTA
AATAGCTGGTTTCAGCATCGGCCCCCAGGGGCCCCCCCTGAACGCTACCTCGGCTTGCCAGGATCCC
TG
AAGTGGGAGGACAGAGGTCCAAGTGGGCAAGGGCAGGGGCAGTTCTTGATACAGCAGGTGACCCTGAA
A
ATTCCCATTTCCATAGAGTTTGTGTTTGAATCAGGCAGTGCCCAGGCAGGAGGAAATCAAGCCCTGCCA
AGA
CTGGCAGGCAGTCTACTGACCCAGGCCCTGGAGAGCCATGCTGAAGGCTTTAGAGAGCGCTTTGAGA
AG
ACCTTCCAGCTGAAGGAGAAGGGCCTGAGCTCTGGCGAGCAGGTTTTGGGTCAGGCTGCCCTCAGCGG
C
CTCCTTGGTGGAATTGGCTACTTCTACGGACAAGGGCTGGTATTGCCAGACATCGGGGTGGAAGGGTCT
GAG
CAGAAGGTGGACCCAGCCCTCTTTCCACCCGTACCTCTTTTTACAGCAGTGCCCTCCCGGTCATTCT
TC
CCACGAGGCTTCCTTTGGGATGAAGGCTTTCACCAGCTGGTGGTTCAGCGGTGGGATCCCTCCCTCAC
C
CGGGAAGCCCTTGGCCACTGGCTGGGGCTGCTAAATGCTGATGGCTGGATTGGGAGGGAGCAGATACTG
GGG
GATGAGGCCCGAGCCCGGGTGCCTCCAGAATTCCTAGTACAACGAGCAGTCCACGCCAACCCCCCAA
CC
CTACTTTTGCCTGTAGCCCATATGCTAGAGGTTGGTGACCCTGACGACTTGGCTTTCCTCCGAAAGGC
C
TTGCCCCGCCTGCATGCCTGGTTTTCCTGGCTCCATCAGAGCCAGGCAGGCCCACTGCCACTATCTTAC
CGC
TGGCGGGGACGGGACCCTGCCTTACCAACCTTACTGAACCCCAAGACCCTACCCTCTGGGCTGGATG
AC
TACCCCCGGGCTTCACACCCTTCAGTAACCGAGCGGCACCTGGACCTGCGATGTTGGGTGGCACTGGG
T
GCCCGTGTGCTGACGCGGCTGGCAGAGCATCTGGGTGAGGCTGAGGTAGCTGCTGAGCTGGGCCCACTG
GCT
GCCTCACTGGAGGCAGCAGAGAGCCTGGATGAGCTGCACTGGGCCCCAGAGCTAGGAGTCTTTGCAG
AC
TTTGGGAACCACACAAAAGCAGTACAGCTGAAGCCCAGGCCCCCTCAGGGGCTCGTTCGGGTGGTGGG
T
CGGCCCCAACCTCAACTGCAGTATGTAGATGCTCTTGGCTATGTCAGTCTTTTTCCCTTGCTGCTGCGA
CTG
CTGGACCCCACCTCATCCCGCCTTGGGCCCCTGCTGGACATTCTAGCCGACAGCCGCCATCTCTGGA
GC
CCCTTTGGTTTACGCTCCCTTGCAGCCTCCAGCTCCTTTTATGGCCAGCGCAATTCAGAGCATGATCC
C
CCCTACTGGCGGGGTGCTGTGTGGCTCAATGTCAACTACCTGGCTTTGGGAGCACTCCACCACTATGGG
CAT
CTGGAGGGTCCTCACCAGGCTCGGGCTGCCAAACTCCACGGTGAGCTCCGTGCCAACGTGGTAGGCA
AT
GTATGGCGCCAGTACCAGGCTACAGGCTTTCTTTGGGAGCAGTACAGTGACCGCGATGGGCGAGGCAT
G
GGCTGCCGCCCTTTCCACGGCTGGACCAGCCTTGTCTTACTGGCCATGGCTGAAGACTACTGA


Translation (837 aa):
MARGERRRRAVPAEGVRTAERAARGGPGRRDGRGGGPRSTAGGVALAVVVLSLALGMSGRWVLAWYRARR
A
VTLHSAPPVLPADSSSPAVAPDLFWGTYRPHVYFGMKTRSPKPLLT
GLMWAQQGTTPGTPKLRHTCEQG
D
GVGPYGWEFHDGLSFGRQHIQDGALRLTTEFVKRPGGQHGGDWSWRVTVEPQ
DSGTSALPLVSLFFYVV
T
DGKEVLLPEVGAKGQLKFISGHTSELGDFRFTLLPPTSPGDTAPKYG
SYNVFWTSNPGLPLLTEMVKSR
L
NSWFQHRPPGAPPERYLGLPGSLKWEDRGPSGQGQGQFLIQQVTLKIPISIEFVFESGSAQAGGNQALP
R
LAGSLLTQALESHAEGFRERFEKTFQLKEKGLSSGEQVLGQAALSGLLGGIGYFYGQGLVLPDIGVEGS
E
QKVDPALFPPVPLFTAVPSRSFFPRGFLWDEGFHQLVVQRWDPSLTREALGHWLGLLNADGWIGREQIL
G
DEARARVPPEFLVQRAVHANPPTLLLPVAHMLEVGDPDDLAFLRKALPRLHAWFSWLHQSQAGPLPLSY
R
WRGRDPALPTLLNPKTLPSGLDDYPRASHPSVTERHLDLRCWVALGARVLTRLAEHLGEAEVAAELGPL
A
ASLEAAESLDELHWAPELGVFADFGNHTKAVQLKPRPPQGLVRVVGRPQPQLQYVDALGYVSLFPLLLR
L
LDPTSSRLGPLLDILADSRHLWSPFGLRSLAASSSFYGQRNSEHDPPYWRGAVWLNVNYLALGALHHYG
H
LEGPHQARAAKLHGELRANVVGNVWRQYQATGFLWEQYSDRDGRGMGCRPFHGWTSLVLLAMAEDY




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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