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Report for CCDS42936.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42936.1 Public Homo sapiens 21 UMODL1 24 110 108 CCDS HistoryNCBI Gene:89766Re-query CCDS DB by CCDS ID:42936.1Re-query CCDS DB by GeneID:89766See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42936.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000408910.7 ENSP00000386147.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000408910.7Link to Ensembl Protein Viewer:ENSP00000386147.2Re-query CCDS DB by Nucleotide ID:ENST00000408910Re-query CCDS DB by Protein ID:ENSP00000386147
Original member Current member NCBI NM_001004416.3 NP_001004416.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001004416.3Link to Protein Sequence:NP_001004416.3Re-query CCDS DB by Nucleotide ID:NM_001004416Re-query CCDS DB by Protein ID:NP_001004416Link to BLAST:NP_001004416.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004416.3 1318 Q5DID0-1 1318 100% 0 0

Chromosomal Locations for CCDS 42936.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 42071317 42071392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 42076005 42076247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 42084084 42084245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 42085291 42085412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 42088294 42088480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 42090298 42090438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 42098926 42099180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 42102166 42102278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 42103868 42104087 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 42109562 42109699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 42110880 42111121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 42111506 42111710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 42113573 42113830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 42115873 42115985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 42119111 42119324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 42121087 42121224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 42122831 42123150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 42126345 42126490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 42127006 42127242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 42127672 42127831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 42129713 42129797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 42137439 42137620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3957 nt):
ATGCTCAGGACCTCGGGGCTGGCACTGCTGGCTCTGGTCAGTGCTGTGGGCCCAAGCCAGGCCAGCGGCT
TCACAGAAAAAGGCCTCTCCCTGTTGGGCTACCAGCTATGCAGCCACCGTGTGACCCACACTGTACAGAA
GGTGGAGGCCGTGCAGACGTCCTACACGTCCTATGTGTCCTGCGGCGGCTGGATCCCCTGGAGGCGGTGC
CCTAAGATGGTTTACCGGACACAGTACCTGGTAGTGGAGGTCCCCGAGTCCAGGAACGTGACTGACTGCT
GTGAGGGCTATGAACAGCTCGGCCTCTACTGTGTCTTGCCCCTGAATCAGTCCGGGCAGTTCACGTCAAG
ACCTGGGGCCTGCCCCGCAGAGGGGCCTGAACCATCCACCTCCCCCTGCAGCTTGGACATCGACTGTCCT
GGACTTGAGAAGTGCTGCCCCTGGTCAGGGGGGCGCTACTGCATGGCCCCTGCACCCCAAGCTCCAGAGA
GGGACCCTGTGGGCTCCTGGTACAACGTCACCATACTGGTGAAAATGGACTTCAAGGAACTCCAGCAAGT
GGACCCCAGGCTCCTGAACCACATGCGCCTTCTGCATTCCTTGGTCACCAGCGCCCTGCAACCAATGGCC
TCCACCGTCCACCACCTGCACTCAGCCCCTGGGAACGCCTCCACCACAGTGTCGCGGCTGCTACTGGGCC
TGCCACGGCCACTGCCTGTGGCTGACGTCTCCACCCTGCTGGGTGACATTGCGAAGCGTGTCTATGAAGT
GATCAGCGTCCAGGTGCAAGATGTCAATGAGTGTTTCTATGAGGAGCTCAATGCCTGCTCTGGAAGGGAA
CTGTGCGCAAACCTGGAGGGCTCGTACTGGTGCGTCTGTCACCAGGAAGCTCCAGCCACGTCTCCACGGA
AGCTGAACCTGGAGTGGGAAGATTGTCCTCCAGTCAGTGACTACGTGGTCCTCAACGTCACCAGTGACAG
TTTTCAAGTATCCTGGCGTTTAAATTCTACACAGAACCACACTTTCCATGTCCGGGTTTACCGGGGTATG
GAGTTGCTCAGGAGCGCCAGGACACAGAGCCAGGCACTGGCAGTGGCTGGGCTGGAGGCTGGAGTGCTGT
ACAGGGTGAAGACCAGCTACCAGGGGTGCGGGGCCGACGTCTCCACCACGCTGACCATCAAAACCAATGC
CCAGGTATTTGAAGTCACAATAAAGATTGTAAACCACAACCTGACGGAGAAGTTACTCAACCGCAGCAGT
GTGGAGTACCAGGACTTTTCTAGACAACTGCTTCACGAGGTCGAGAGCTCCTTCCCACCAGTGGTGTCTG
ACTTGTACCGAAGTGGGAAGCTGAGAATGCAGATCGTGTCTCTCCAGGCGGGAAGTGTGGTCGTGAGGCT
CAAGCTCACCGTGCAGGACCCCGGGTTTCCCATGGGCATCTCCACGCTGGCCCCCATACTCCAGCCCCTG
TTGGCAAGCACAGTGTTCCAGATTGACCGGCAGGGGACACGCGTGCAAGACTGGGACGAGTGTGTGGACA
GCGCGGAACACGACTGCTCACCGGCTGCCTGGTGCATCAACCTGGAGGGCTCCTACACCTGCCAGTGCCG
TACCACCAGGGACGCCACCCCCTCCCGCGCAGGCCGGGCCTGTGAGGGTGACCTGGTGAGCCCCATGGGC
GGTGGACTGTCTGCGGCAACAGGGGTAACGGTCCCAGGTCTTGGCACGGGAACAGCAGCCCTCGGCCTAG
AGAACTTCACCTTGTCACCCAGTCCTGGGTACCCTCAGGGCACCCCGGCAGCAGGCCAGGCCTGGACCCC
AGAGCCCTCACCCAGAAGAGGGGGCAGCAATGTGGTCGGGTATGACAGGAACAACACAGGAAAAGGCGTG
GAGCAGGAGCTACAGGGAAACTCCATCATGGAGCCACCCTCCTGGCCTTCCCCTACTGAGGACCCCACCG
GCCACTTCCTGTGGCATGCCACCCGTTCCACCCGGGAAACACTTCTGAATCCCACGTGGCTGCGAAATGA
GGACAGTGGACCCTCCGGTTCTGTAGACCTGCCATTGACCTCCACCCTCACAGCTCTGAAGACCCCCGCC
TGTGTTCCTGTCTCCATTGGGAGGATCATGGTCTCCAATGTGACCAGCACCGGCTTCCACCTGGCATGGG
AGGCGGATCTTGCTATGGACTCCACCTTCCAGCTCACTCTGACTTCCATGTGGAGCCCTGCTGTGGTCCT
AGAGACCTGGAACACGAGTGTGACACTGTCGGGGCTGGAGCCTGGGGTCTTGCACCTGGTTGAGATCATG
GCCAAAGCATGTGGGAAAGAAGGTGCCAGAGCTCATCTGAAAGTGAGGACAGCAGCCCGGAAGCTCATTG
GAAAGGTCAGAATCAAAAATGTCAGGTACTCAGAATCCTTTCGCAACGCAAGCAGCCAGGAGTATCGAGA
TTTCCTAGAACTATTCTTCAGGATGGTGCGGGGCTCCCTGCCAGCCACCATGTGTCAGCACATGGACGCT
GGTGGGGTCAGGATGGAAGTCGTCAGCGTCACCAACGGCAGCATCGTGGTGGAGTTTCACTTGCTGATAA
TCGCAGATGTGGATGTCCAGGAGGTGTCAGCTGCATTTCTCACCGCCTTCCAGACCGTGCCTCTGCTGGA
GGTGATCAGAGGCGACACCTTCATACAGGATTACGATGAGTGTGAAAGGAAGGAGGACGACTGTGTGCCG
GGGACATCCTGTCGAAACACCCTCGGGTCTTTCACTTGTAGCTGCGAGGGAGGAGCCCCCGACTTCCCTG
TGGAATATTCTGAGAGACCCTGTGAAGGTGACTCTCCTGGCAATGAAACCTGGGCCACCAGCCCAGAGAG
GCCTCTCACCACAGCAGGGACCAAGGCTGCCTTTGTGCAAGGCACCAGCCCCACCCCCCAAGGCCTGCCC
CAGCGGCTGAACCTGACCGGAGCAGTCAGGGTGCTCTGTGAGATCGAGAAGGTGGTTGTCGCCATCCAGA
AGCGCTTCCTGCAGCAGGAATCCATCCCCGAGTCCTCGTTGTACCTCAGCCACCCCTCCTGCAACGTGAG
CCACAGCAATGGCACACACGTGCTCCTGGAGGCCGGCTGGAGCGAGTGTGGGACCCTCATGCAGAGCAAC
ATGACGAACACCGTGGTGAGGACCACGCTGAGGAACGACCTGTCCCAGGAGGGCATCATCCACCACCTGA
AGATCCTGAGCCCCATCTACTGCGCCTTCCAGAATGACCTGCTGACATCCTCCGGCTTCACCCTGGAGTG
GGGGGTTTACACCATCATCGAGGACCTCCACGGCGCTGGGAATTTTGTTACCGAAATGCAGTTGTTTATC
GGAGACTCTCCCATACCTCAGAATTATAGCGTGTCTGCCAGTGACGATGTCAGGATCGAAGTGGGGCTCT
ACAGGCAGAAAAGCAACCTCAAGGTGGTCCTGACGGAGTGCTGGGCAACCCCGTCTAGCAACGCCCGGGA
CCCCATCACCTTCAGCTTCATTAACAACAGCTGCCCTGTGCCCAACACATACACCAACGTGATTGAGAAC
GGCAACTCCAATAAGGCCCAGTTCAAGCTGAGGATCTTTTCCTTTATCAACGACTCCATCGTCTACCTGC
ACTGCAAACTCCGCGTCTGCATGGAATCCCCCGGAGCCACGTGCAAAATCAATTGCAATAACTTTCGGTT
GCTGCAAAATAGTGAAACCTCTGCCACACACCAGATGTCCTGGGGACCCCTCATCCGGTCTGAAGGTGAG
CCTCCTCATGCAGAAGCAGGCCTGGGTGCCGGTTATGTGGTCCTTATTGTGGTGGCCATCTTCGTGCTGG
TGGCGGGAACAGCCACCCTTCTGATCGTGCGCTACCAGAGAATGAATGGGAGATACAACTTTAAAATCCA
GTCCAACAACTTCAGCTACCAGGTGTTCTACGAATAG

Translation (1318 aa):
MLRTSGLALLALVSAVGPSQASGFTEKGLSLLGYQLCSHRVTHTVQKVEAVQTSYTSYVSCGGWIPWRRC
PKMVYRTQYLVVEVPESRNVTDCCEGYEQLGLYCVLPLNQSGQFTSRPGACPAEGPEPSTSPCSLDIDCP
GLEKCCPWSGGRYCMAPAPQAPERDPVGSWYNVTILVKMDFKELQQVDPRLLNHMRLLHSLVTSALQPMA
STVHHLHSAPGNASTTVSRLLLGLPRPLPVADVSTLLGDIAKRVYEVISVQVQDVNECFYEELNACSGRE
LCANLEGSYWCVCHQEAPATSPRKLNLEWEDCPPVSDYVVLNVTSDSFQVSWRLNSTQNHTFHVRVYRGM
ELLRSARTQSQALAVAGLEAGVLYRVKTSYQGCGADVSTTLTIKTNAQVFEVTIKIVNHNLTEKLLNRSS
VEYQDFSRQLLHEVESSFPPVVSDLYRSGKLRMQIVSLQAGSVVVRLKLTVQDPGFPMGISTLAPILQPL
LASTVFQIDRQGTRVQDWDECVDSAEHDCSPAAWCINLEGSYTCQCRTTRDATPSRAGRACEGDLVSPMG
GGLSAATGVTVPGLGTGTAALGLENFTLSPSPGYPQGTPAAGQAWTPEPSPRRGGSNVVGYDRNNTGKGV
EQELQGNSIMEPPSWPSPTEDPTGHFLWHATRSTRETLLNPTWLRNEDSGPSGSVDLPLTSTLTALKTPA
CVPVSIGRIMVSNVTSTGFHLAWEADLAMDSTFQLTLTSMWSPAVVLETWNTSVTLSGLEPGVLHLVEIM
AKACGKEGARAHLKVRTAARKLIGKVRIKNVRYSESFRNASSQEYRDFLELFFRMVRGSLPATMCQHMDA
GGVRMEVVSVTNGSIVVEFHLLIIADVDVQEVSAAFLTAFQTVPLLEVIRGDTFIQDYDECERKEDDCVP
GTSCRNTLGSFTCSCEGGAPDFPVEYSERPCEGDSPGNETWATSPERPLTTAGTKAAFVQGTSPTPQGLP
QRLNLTGAVRVLCEIEKVVVAIQKRFLQQESIPESSLYLSHPSCNVSHSNGTHVLLEAGWSECGTLMQSN
MTNTVVRTTLRNDLSQEGIIHHLKILSPIYCAFQNDLLTSSGFTLEWGVYTIIEDLHGAGNFVTEMQLFI
GDSPIPQNYSVSASDDVRIEVGLYRQKSNLKVVLTECWATPSSNARDPITFSFINNSCPVPNTYTNVIEN
GNSNKAQFKLRIFSFINDSIVYLHCKLRVCMESPGATCKINCNNFRLLQNSETSATHQMSWGPLIRSEGE
PPHAEAGLGAGYVVLIVVAIFVLVAGTATLLIVRYQRMNGRYNFKIQSNNFSYQVFYE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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