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Report for CCDS43056.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43056.1 Public Homo sapiens 3 METTL6 24 110 108 CCDS HistoryNCBI Gene:131965Re-query CCDS DB by CCDS ID:43056.1Re-query CCDS DB by GeneID:131965See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43056.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000383790.8 ENSP00000373300.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000383790.8Link to Ensembl Protein Viewer:ENSP00000373300.3Re-query CCDS DB by Nucleotide ID:ENST00000383790Re-query CCDS DB by Protein ID:ENSP00000373300
Original member Current member EBI ENST00000443029.5 ENSP00000407613.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000443029.5Link to Ensembl Protein Viewer:ENSP00000407613.1Re-query CCDS DB by Nucleotide ID:ENST00000443029Re-query CCDS DB by Protein ID:ENSP00000407613
Original member Current member NCBI NM_152396.4 NP_689609.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152396.4Link to Protein Sequence:NP_689609.2Re-query CCDS DB by Nucleotide ID:NM_152396Re-query CCDS DB by Protein ID:NP_689609Link to BLAST:NP_689609.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689609.2 284 Q8TCB7-1 284 100% 0 0

Chromosomal Locations for CCDS 43056.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 15411256 15411437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 15414021 15414162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 15415772 15415942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 15424955 15425089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 15426287 15426511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (855 nt):
ATGGCTTCTTTGCAAAGGAAAGGGCTGCAGGCAAGGATTCTCACCTCTGAAGAAGAGGAGAAACTGAAAA
GAGACCAAACTTTGGTGTCTGATTTTAAACAGCAGAAATTGGAACAAGAGGCTCAGAAAAATTGGGATCT
TTTTTACAAAAGAAATAGCACTAATTTCTTCAAAGACAGACACTGGACCACCAGAGAGTTTGAGGAGCTA
AGATCATGTAGAGAGTTTGAAGATCAAAAGTTAACAATGCTTGAAGCTGGCTGTGGGGTTGGAAACTGTT
TATTCCCACTTTTAGAAGAAGATCCGAATATCTTTGCCTATGCCTGTGATTTTTCTCCAAGAGCCATTGA
ATATGTTAAGCAAAATCCTTTATATGATACAGAAAGATGCAAGGTATTCCAGTGTGATCTGACTAAAGAT
GATCTTCTGGATCATGTACCGCCAGAGTCTGTGGATGTTGTTATGTTGATATTTGTGCTGTCAGCTGTTC
ATCCTGATAAGATGCACCTTGTCTTACAAAACATTTACAAGGTATTAAAACCAGGCAAAAGTGTCTTGTT
TCGTGACTACGGACTGTATGATCATGCCATGCTTAGGTTTAAAGCCAGCAGCAAACTTGGAGAAAACTTT
TATGTTAGACAAGATGGGACCAGATCATATTTTTTTACTGATGACTTCCTGGCTCAGCTCTTTATGGACA
CAGGTTATGAAGAAGTGGTAAACGAGTATGTGTTTCGAGAGACGGTGAATAAAAAAGAAGGCCTGTGTGT
GCCAAGAGTTTTCCTTCAGAGCAAATTTCTAAAGCCTCCTAAGAACCCATCTCCTGTGGTCCTGGGCCTG
GATCCTAAGTCCTGA

Translation (284 aa):
MASLQRKGLQARILTSEEEEKLKRDQTLVSDFKQQKLEQEAQKNWDLFYKRNSTNFFKDRHWTTREFEEL
RSCREFEDQKLTMLEAGCGVGNCLFPLLEEDPNIFAYACDFSPRAIEYVKQNPLYDTERCKVFQCDLTKD
DLLDHVPPESVDVVMLIFVLSAVHPDKMHLVLQNIYKVLKPGKSVLFRDYGLYDHAMLRFKASSKLGENF
YVRQDGTRSYFFTDDFLAQLFMDTGYEEVVNEYVFRETVNKKEGLCVPRVFLQSKFLKPPKNPSPVVLGL
DPKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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