NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS43270.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43270.1 Public Homo sapiens 4 NAA15 24 110 108 CCDS HistoryNCBI Gene:80155Re-query CCDS DB by CCDS ID:43270.1Re-query CCDS DB by GeneID:80155See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43270.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000296543.10 ENSP00000296543.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000296543.10Link to Ensembl Protein Viewer:ENSP00000296543.4Re-query CCDS DB by Nucleotide ID:ENST00000296543Re-query CCDS DB by Protein ID:ENSP00000296543
Original member Current member NCBI NM_057175.5 NP_476516.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_057175.5Link to Protein Sequence:NP_476516.1Re-query CCDS DB by Nucleotide ID:NM_057175Re-query CCDS DB by Protein ID:NP_476516Link to BLAST:NP_476516.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_476516.1 866 Q9BXJ9-1 866 100% 0 0

Chromosomal Locations for CCDS 43270.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 139301778 139301831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 139334174 139334258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 139336848 139336952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 139340912 139341069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 139342826 139342960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 139344186 139344339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 139349462 139349581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 139351191 139351286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 139351505 139351611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 139354026 139354098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 139357386 139357555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 139359743 139359895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 139360500 139360628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 139361724 139361937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 139370211 139370404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 139376365 139376473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 139378756 139378854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 139384832 139384978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 139386133 139386230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 139387884 139388084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2601 nt):
ATGCCGGCCGTGAGCCTCCCGCCCAAGGAGAATGCGCTCTTCAAGCGGATCTTGAGGTGTTATGAACATA
AACAGTATAGAAATGGATTGAAATTCTGTAAACAAATACTTTCTAATCCCAAATTTGCAGAGCATGGAGA
AACCTTGGCTATGAAAGGATTAACATTGAACTGTTTGGGGAAAAAGGAAGAAGCTTATGAATTGGTTCGT
AGAGGTTTGAGAAATGACTTGAAGAGTCATGTGTGTTGGCACGTTTATGGCCTTCTTCAGAGGTCAGACA
AGAAGTATGATGAAGCCATTAAGTGTTACAGAAATGCACTAAAATGGGATAAAGACAATCTTCAAATCTT
AAGGGACCTTTCCTTACTACAGATTCAAATGCGAGATCTTGAGGGTTACAGGGAAACGAGGTATCAGTTA
CTTCAGCTTCGACCTGCGCAGAGAGCATCATGGATTGGTTATGCTATTGCTTACCATTTATTAGAAGATT
ATGAAATGGCAGCAAAGATTTTAGAAGAATTTAGGAAAACACAACAGACATCCCCTGACAAGGTGGATTA
TGAATATAGTGAACTACTCTTATATCAGAATCAAGTTCTTCGGGAAGCAGGTCTCTATAGAGAAGCTTTG
GAACATCTTTGTACCTATGAAAAGCAGATTTGTGATAAACTTGCTGTAGAAGAAACCAAAGGGGAACTTC
TGTTGCAACTATGTCGTTTGGAAGATGCTGCAGATGTTTATAGAGGATTGCAAGAGAGAAATCCTGAAAA
CTGGGCCTATTACAAAGGCTTGGAAAAAGCACTCAAGCCAGCTAATATGTTAGAACGGCTAAAAATTTAT
GAGGAAGCCTGGACTAAATATCCCAGGGGACTGGTGCCAAGAAGGCTGCCGTTAAACTTTTTATCTGGTG
AGAAGTTTAAAGAATGTTTGGATAAGTTCCTAAGGATGAATTTCAGCAAGGGTTGCCCACCAGTCTTCAA
TACTTTAAGATCATTATACAAAGACAAAGAAAAGGTGGCAATCATAGAAGAGTTAGTAGTAGGTTATGAA
ACCTCTCTAAAAAGCTGCCGGTTATTTAACCCCAATGATGATGGAAAGGAGGAACCACCAACCACATTAC
TTTGGGTCCAGTACTACTTGGCACAACATTATGACAAAATTGGTCAGCCATCTATTGCTTTGGAGTACAT
AAATACTGCTATTGAAAGTACACCTACATTAATAGAACTCTTTCTCGTGAAAGCTAAAATCTATAAGCAT
GCTGGAAATATTAAAGAAGCTGCAAGGTGGATGGATGAGGCCCAGGCCTTGGACACAGCAGACAGATTTA
TCAACTCCAAATGTGCAAAATACATGCTAAAAGCCAACCTGATTAAAGAAGCTGAAGAAATGTGCTCAAA
GTTTACAAGGGAAGGAACATCAGCGGTAGAGAATTTGAATGAAATGCAGTGCATGTGGTTCCAAACAGAA
TGTGCCCAGGCTTATAAAGCAATGAATAAATTTGGTGAAGCACTTAAGAAATGTCATGAGATTGAGAGAC
ATTTTATAGAAATCACTGATGACCAGTTTGACTTTCATACATACTGTATGAGGAAGATTACCCTTAGATC
ATATGTGGACTTATTAAAACTAGAAGATGTACTTCGACAGCATCCATTTTACTTCAAGGCAGCAAGAATT
GCTATAGAGATCTATTTGAAGCTTCATGACAACCCCCTTACAGATGAGAATAAAGAACACGAAGCTGATA
CAGCAAACATGTCTGACAAAGAGCTAAAGAAGCTACGTAATAAACAAAGAAGAGCTCAAAAGAAAGCCCA
GATAGAAGAAGAGAAAAAAAATGCAGAAAAAGAAAAGCAGCAGAGAAATCAGAAAAAGAAGAAGGATGAT
GATGATGAGGAGATAGGAGGTCCAAAAGAAGAACTTATTCCAGAGAAACTGGCCAAGGTTGAAACTCCAT
TGGAAGAAGCTATTAAATTTTTAACACCGTTGAAGAACTTGGTGAAGAACAAGATAGAGACTCATCTTTT
TGCCTTTGAGATTTACTTTAGGAAAGAAAAGTTTCTTTTGATGCTACAATCAGTAAAGAGGGCATTTGCT
ATTGATTCTAGTCATCCCTGGCTTCATGAGTGTATGATTCGTCTCTTTAATACTGCAGTGTGTGAAAGTA
AAGATTTATCTGATACAGTTAGAACAGTATTAAAACAAGAAATGAATCGTCTTTTTGGAGCAACGAATCC
AAAGAATTTTAATGAAACTTTTCTGAAAAGGAATTCTGATTCATTGCCACACAGATTATCAGCTGCCAAA
ATGGTATATTACTTAGATCCTTCTAGTCAGAAGCGAGCTATAGAGTTGGCAACAACACTTGATGAATCTC
TCACTAACAGAAACCTCCAGACATGTATGGAGGTATTGGAAGCCTTGTATGATGGTAGCCTAGGAGACTG
TAAAGAAGCTGCTGAAATTTATAGAGCAAATTGTCATAAGCTTTTCCCTTATGCTTTGGCTTTCATGCCT
CCTGGATATGAAGAGGATATGAAGATCACAGTTAATGGAGATAGTTCTGCAGAAGCTGAAGAACTGGCCA
ATGAAATTTGA

Translation (866 aa):
MPAVSLPPKENALFKRILRCYEHKQYRNGLKFCKQILSNPKFAEHGETLAMKGLTLNCLGKKEEAYELVR
RGLRNDLKSHVCWHVYGLLQRSDKKYDEAIKCYRNALKWDKDNLQILRDLSLLQIQMRDLEGYRETRYQL
LQLRPAQRASWIGYAIAYHLLEDYEMAAKILEEFRKTQQTSPDKVDYEYSELLLYQNQVLREAGLYREAL
EHLCTYEKQICDKLAVEETKGELLLQLCRLEDAADVYRGLQERNPENWAYYKGLEKALKPANMLERLKIY
EEAWTKYPRGLVPRRLPLNFLSGEKFKECLDKFLRMNFSKGCPPVFNTLRSLYKDKEKVAIIEELVVGYE
TSLKSCRLFNPNDDGKEEPPTTLLWVQYYLAQHYDKIGQPSIALEYINTAIESTPTLIELFLVKAKIYKH
AGNIKEAARWMDEAQALDTADRFINSKCAKYMLKANLIKEAEEMCSKFTREGTSAVENLNEMQCMWFQTE
CAQAYKAMNKFGEALKKCHEIERHFIEITDDQFDFHTYCMRKITLRSYVDLLKLEDVLRQHPFYFKAARI
AIEIYLKLHDNPLTDENKEHEADTANMSDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDD
DDEEIGGPKEELIPEKLAKVETPLEEAIKFLTPLKNLVKNKIETHLFAFEIYFRKEKFLLMLQSVKRAFA
IDSSHPWLHECMIRLFNTAVCESKDLSDTVRTVLKQEMNRLFGATNPKNFNETFLKRNSDSLPHRLSAAK
MVYYLDPSSQKRAIELATTLDESLTNRNLQTCMEVLEALYDGSLGDCKEAAEIYRANCHKLFPYALAFMP
PGYEEDMKITVNGDSSAEAEELANEI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH