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Report for CCDS43273.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43273.1 Public Homo sapiens 4 ANAPC10 24 110 108 CCDS HistoryNCBI Gene:10393Re-query CCDS DB by CCDS ID:43273.1Re-query CCDS DB by GeneID:10393See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43273.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000309439.9 ENSP00000310071.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000309439.9Link to Ensembl Protein Viewer:ENSP00000310071.5Re-query CCDS DB by Nucleotide ID:ENST00000309439Re-query CCDS DB by Protein ID:ENSP00000310071
Original member Current member EBI ENST00000451299.6 ENSP00000403891.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000451299.6Link to Ensembl Protein Viewer:ENSP00000403891.2Re-query CCDS DB by Nucleotide ID:ENST00000451299Re-query CCDS DB by Protein ID:ENSP00000403891
Original member Current member EBI ENST00000507656.6 ENSP00000423995.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000507656.6Link to Ensembl Protein Viewer:ENSP00000423995.1Re-query CCDS DB by Nucleotide ID:ENST00000507656Re-query CCDS DB by Protein ID:ENSP00000423995
Original member Current member EBI ENST00000613466.4 ENSP00000478501.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000613466.4Link to Ensembl Protein Viewer:ENSP00000478501.1Re-query CCDS DB by Nucleotide ID:ENST00000613466Re-query CCDS DB by Protein ID:ENSP00000478501
Original member Current member NCBI NM_001256706.2 NP_001243635.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001256706.2Link to Protein Sequence:NP_001243635.1Re-query CCDS DB by Nucleotide ID:NM_001256706Re-query CCDS DB by Protein ID:NP_001243635Link to BLAST:NP_001243635.1
Original member Current member NCBI NM_001256707.2 NP_001243636.1 Accepted alive Link to Nucleotide Sequence:NM_001256707.2Link to Protein Sequence:NP_001243636.1Re-query CCDS DB by Nucleotide ID:NM_001256707Re-query CCDS DB by Protein ID:NP_001243636Link to BLAST:NP_001243636.1
Original member Current member NCBI NM_001256708.2 NP_001243637.1 Accepted alive Link to Nucleotide Sequence:NM_001256708.2Link to Protein Sequence:NP_001243637.1Re-query CCDS DB by Nucleotide ID:NM_001256708Re-query CCDS DB by Protein ID:NP_001243637Link to BLAST:NP_001243637.1
Original member Current member NCBI NM_014885.5 NP_055700.2 Accepted alive Link to Nucleotide Sequence:NM_014885.5Link to Protein Sequence:NP_055700.2Re-query CCDS DB by Nucleotide ID:NM_014885Re-query CCDS DB by Protein ID:NP_055700Link to BLAST:NP_055700.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001243635.1 185 Q9UM13 185 100% 0 0
NP_001243636.1 185 Q9UM13 185 100% 0 0
NP_001243637.1 185 Q9UM13 185 100% 0 0
NP_055700.2 185 Q9UM13 185 100% 0 0

Chromosomal Locations for CCDS 43273.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 144995373 144995603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 145064572 145064692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 145081660 145081750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 145095985 145096099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (558 nt):
ATGACTACACCAAACAAGACACCTCCTGGTGCTGACCCCAAGCAGTTGGAAAGGACTGGAACAGTACGGG
AAATTGGGTCACAAGCTGTTTGGTCACTCTCATCTTGCAAACCAGGATTTGGAGTGGATCAGTTACGAGA
TGACAATCTAGAAACTTATTGGCAATCAGATGGTTCCCAGCCTCATTTAGTGAACATCCAATTCAGAAGA
AAAACAACAGTGAAGACATTATGTATTTATGCAGACTACAAATCTGATGAAAGCTATACTCCAAGCAAGA
TCTCAGTCAGAGTAGGAAATAATTTTCACAACCTTCAAGAAATTCGGCAACTTGAGTTGGTGGAACCAAG
TGGCTGGATTCATGTTCCCTTAACTGACAATCATAAGAAGCCAACTCGTACATTCATGATACAGATTGCT
GTTCTAGCCAATCACCAGAATGGAAGAGACACCCATATGAGACAAATTAAAATATACACACCAGTAGAAG
AGAGCTCCATTGGTAAATTTCCTAGATGTACAACTATAGATTTCATGATGTATCGTTCAATAAGGTGA

Translation (185 aa):
MTTPNKTPPGADPKQLERTGTVREIGSQAVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNIQFRR
KTTVKTLCIYADYKSDESYTPSKISVRVGNNFHNLQEIRQLELVEPSGWIHVPLTDNHKKPTRTFMIQIA
VLANHQNGRDTHMRQIKIYTPVEESSIGKFPRCTTIDFMMYRSIR


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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