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Report for CCDS4331.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4331.1 Public Homo sapiens 5 MRPL22 24 110 108 CCDS HistoryNCBI Gene:29093Re-query CCDS DB by CCDS ID:4331.1Re-query CCDS DB by GeneID:29093See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4331.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000523037.6 ENSP00000431040.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000523037.6Link to Ensembl Protein Viewer:ENSP00000431040.1Re-query CCDS DB by Nucleotide ID:ENST00000523037Re-query CCDS DB by Protein ID:ENSP00000431040
Original member Current member NCBI NM_014180.4 NP_054899.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014180.4Link to Protein Sequence:NP_054899.2Re-query CCDS DB by Nucleotide ID:NM_014180Re-query CCDS DB by Protein ID:NP_054899Link to BLAST:NP_054899.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_054899.2 206 Q9NWU5-1 206 100% 0 0

Chromosomal Locations for CCDS 4331.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 154941111 154941138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154941217 154941265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154950821 154950938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154956371 154956436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154957135 154957212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154959980 154960049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154966686 154966897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (621 nt):
ATGGCGGCGGCAGTACTGGGACAGTTGGGTGCGTTATGGATACATAACCTGAGGAGCCGGGGGAAGCTGG
CCTTGGGTGTTTTACCTCAATCATATATCCACACAAGTGCTTCTCTTGACATTTCTCGAAAATGGGAGAA
GAAGAATAAAATTGTTTATCCTCCACAACTGCCTGGAGAACCTCGGAGACCAGCAGAAATCTACCACTGT
CGAAGACAAATAAAATATAGCAAAGACAAGATGTGGTATTTGGCAAAATTGATACGAGGAATGTCTATTG
ACCAGGCTTTGGCTCAGTTGGAATTCAATGACAAAAAAGGGGCCAAAATAATTAAAGAGGTTCTCTTAGA
AGCACAAGATATGGCAGTGAGAGACCATAACGTGGAATTCAGGTCCAATTTATATATAGCTGAGTCCACC
TCAGGACGAGGCCAGTGCCTGAAACGCATCCGCTACCATGGCAGAGGTCGCTTTGGGATCATGGAGAAGG
TTTATTGCCATTATTTTGTGAAGTTGGTGGAAGGGCCCCCACCTCCACCTGAGCCACCAAAGACGGCAGT
TGCCCATGCCAAAGAGTATATTCAGCAGCTTCGCAGCCGGACCATCGTTCACACTCTATGA

Translation (206 aa):
MAAAVLGQLGALWIHNLRSRGKLALGVLPQSYIHTSASLDISRKWEKKNKIVYPPQLPGEPRRPAEIYHC
RRQIKYSKDKMWYLAKLIRGMSIDQALAQLEFNDKKGAKIIKEVLLEAQDMAVRDHNVEFRSNLYIAEST
SGRGQCLKRIRYHGRGRFGIMEKVYCHYFVKLVEGPPPPPEPPKTAVAHAKEYIQQLRSRTIVHTL


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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