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Report for CCDS43584.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43584.1 Public Homo sapiens 7 POM121L12 24 110 108 CCDS HistoryNCBI Gene:285877Re-query CCDS DB by CCDS ID:43584.1Re-query CCDS DB by GeneID:285877See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43584.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000408890.6 ENSP00000386133.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000408890.6Link to Ensembl Protein Viewer:ENSP00000386133.3Re-query CCDS DB by Nucleotide ID:ENST00000408890Re-query CCDS DB by Protein ID:ENSP00000386133
Original member Current member NCBI NM_182595.4 NP_872401.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_182595.4Link to Protein Sequence:NP_872401.3Re-query CCDS DB by Nucleotide ID:NM_182595Re-query CCDS DB by Protein ID:NP_872401Link to BLAST:NP_872401.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_872401.3 296 Q8N7R1 296 100% 0 0

Chromosomal Locations for CCDS 43584.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 53035672 53036562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (891 nt):
ATGGGCGCTGCAGCTCCGGCCGAGTCCGCAGACCTCGGGAACTTCTGGAAGGCGGGAGAACCCCTGCTGC
AAGGCCCCGACGCCCTGGCGGCTCCCATGAGCAGGTCACCCAGCACGCCCCAGACCACGCCATCTCCCCA
GGGTCGCCAGAGTCCCTGGCCCCTGAGGTCCCTGACTCAGAGCCATATTCAGTACTTCCAGTGGGGGCGC
CCGGTGCCCAGCACCCACCTCATCGAGGTGCGGCCCACCCAGGACCCCGCCAAGCCGCAGCGGGTGGTCT
CCGAGGGCTGGAGGCGCCCTGCCCTTCCCGGGGAGACCGCTCTGGGGCGAGACCTCTCCTGTGCCTGGGA
GGGTTGCATGAAAGGGGGGCTGTGTCGTGCCTGGAACCCAGGACGGACCTGGAGCCCGGTGACCATCGGG
ATCGCGCCCCCTGAGCGTCAGGAGAGCCCCTGGAGATCCCCTGGACAGAGAGCCCGCCCCGCAGGCCGCC
CCGCCGCCCAGGAGCTCCTGGACCCCTGCACCCGGGAGACTCTGCTGGGGGCGCTCAGCCAGTGCCCCAA
GGGAAGCGCTAGGTTCGACGGGCCGTTGTGGTTCGAGGTCTCAGACAGCAAGGGTGGCAGGCGGAACCTG
CAGCCCCGGCCCTCTGCCTTCAAGCCCCTGAGCAAAAATGGAGCGGTTGCTTCCTTCGTGCCCAGGCCAG
GGCCTCTGAAGCCGAGCCTCGGCCCCTGGAGCCTCAGTTTTTGTGATGATGCTTGGCCTTCCGTGCTGGT
CCAGCCCGCCCCATCCGCCATCTGGGACTTCTGGGAGGCGACAACGCCTTCCTGCGGCAGCTGCAGTAGG
GTCTCCTTCGCCCTCGAGGTCACCCAGTCTGCTGGCCCCTTTGGCTCCTAA

Translation (296 aa):
MGAAAPAESADLGNFWKAGEPLLQGPDALAAPMSRSPSTPQTTPSPQGRQSPWPLRSLTQSHIQYFQWGR
PVPSTHLIEVRPTQDPAKPQRVVSEGWRRPALPGETALGRDLSCAWEGCMKGGLCRAWNPGRTWSPVTIG
IAPPERQESPWRSPGQRARPAGRPAAQELLDPCTRETLLGALSQCPKGSARFDGPLWFEVSDSKGGRRNL
QPRPSAFKPLSKNGAVASFVPRPGPLKPSLGPWSLSFCDDAWPSVLVQPAPSAIWDFWEATTPSCGSCSR
VSFALEVTQSAGPFGS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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  VEGA Genome Browser

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