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Report for CCDS4405.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4405.1 Public Homo sapiens 5 GPRIN1 24 110 108 CCDS HistoryNCBI Gene:114787Re-query CCDS DB by CCDS ID:4405.1Re-query CCDS DB by GeneID:114787See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4405.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000303991.5 ENSP00000305839.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000303991.5Link to Ensembl Protein Viewer:ENSP00000305839.4Re-query CCDS DB by Nucleotide ID:ENST00000303991Re-query CCDS DB by Protein ID:ENSP00000305839
Original member Current member NCBI NM_052899.3 NP_443131.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_052899.3Link to Protein Sequence:NP_443131.2Re-query CCDS DB by Nucleotide ID:NM_052899Re-query CCDS DB by Protein ID:NP_443131Link to BLAST:NP_443131.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_443131.2 1008 Q7Z2K8-1 1008 100% 0 0

Chromosomal Locations for CCDS 4405.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 176596808 176599834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3027 nt):
ATGGACACTGCTGAAGACCCGGCCTGGCTCCAGCTGCTTCAAAAGGATTCCAGCCCCCCAGGACCCCGAC
CC
ACAGCCTTCTTCTGCCCACAGGATGGGAGCCTGGGGGCTGGCAGCTCGGCTATGAGGGATTACTGCCC
C
TCCCAGCAAAAGGCAAGCCCTGCACCCCCCAGGCACACCCCTGACCAAAGCCCAGGCATGGAGTCTAGA
CAC
AGAAGCCCCAGTGGGGCTGGGGAAGGGGCCTCCTGCTCTGACGGCCCCAGAGGGAGCCTGGCCTGCC
CC
TCCCCAACCTGCTTCTCTCCCCAGGAGTCACCCTCCAAGGAGACATTGGAGGCACATGGAGCCTCCAT
C
TCAGGGACACCAGAAGCCACCACGTCTGGGAAGCCAGAGCCTGTGTCCTCCGTGAAAACTGAGCCCAAA
TCC
TCAGATGACAGAAATCCCATGTTCTTAGAGAAGATGGATTTCAAGTCCTCAAAGCAGGCCGATTCCA
CT
TCCATAGGAAAGGAGGATCCTGGGTCCTCACGGAAGGCAGATCCCATGTTTACAGGAAAGGCAGAGCC
T
GAAATCTTGGGAAAGGGGGATCCTGTGGCTCCTGGAAGGATGGATCCCATGACTGTAAGAAAGGAAGAT
CTT
GGATCCCTGGGAAAAGTAGATCCTTTGTGCTCCAGCAAGACGTATACAGTGTCACCGAGGAAGGAGG
AT
CCTGGGTCTTTGAGAAAGGTGGATCCTGTGTCCTCAGACAAAGTGGACCCTGTATTCCCAAGAAAGGA
G
GAGCCCAGGTATTCAGGAAAAGAGCATCCTGTGTCCTCAGAAAAGGTCGCTCCTACATCTGCAGAAAAG
GTA
GATCTTGTATTGTCGGGAAAGAGAGATCCTGGGCCCTCGGGAAAGGCAGATCCCATGCCCTTGGAAA
GC
ATGGATTCTGCGTCCACAGGAAAGACAGAGCCGGGGCTCCTGGGCAAGCTGATTCCAGGCTCATCAGG
C
AAGAATGGGCCTGTATCCTCTGGGACCGGGGCTCCTGGGTCCTTGGGAAGGCTGGATCCCACATGCTTG
GGG
ATGGCAGATCCCGCATCTGTGGGAAATGTAGAAACTGTGCCTGCCACAAAAGAGGACTCCCGGTTCC
TG
GGAAAGATGGACCCTGCCTCCTCAGGAGAGGGGCGTCCTGTGTCTGGCCACACGGATACTACGGCTTC
A
GCAAAGACAGATCTCACATCTTTGAAAAATGTGGATCCCATGTCTTCAGGCAAGGTGGATCCAGTTTCT
CTG
GGAAAGATGGACCCCATGTGCTCAGGAAAGCCAGAGCTCTTGTCTCCTGGACAGGCAGAGCGTGTGT
CT
GTGGGAAAGGCAGGAACTGTATCCCCAGGAAAAGAGGACCCGGTGTCCTCCAGAAGGGAGGACCCCAT
A
TCTGCTGGAAGTAGAAAGACATCATCTGAAAAAGTGAATCCTGAGTCTTCAGGAAAGACAAACCCTGTG
TCT
TCAGGTCCAGGCGATCCCAGGTCCTTGGGGACAGCAGGTCCCCCATCTGCAGTAAAGGCTGAGCCAG
CG
ACGGGGGGAAAAGGAGATCCCCTGTCCTCGGAGAAGGCAGGTCTGGTGGCCTCTGGAAAGGCGGCTCC
C
ACAGCCTCAGGGAAGGCCGAGCCCCTCGCGGTGGGCAAGGAGGACCCTGTGAGCAAGGGAAAGGCAGAC
GCT
GGCCCCTCTGGACAAGGGGACTCTGTGTCTATAGGTAAAGTGGTCTCAACTCCAGGAAAAACAGTCC
CG
GTGCCCTCGGGGAAGGTGGATCCCGTGTCCCTGGGAAAAGCAGAAGCTATCCCAGAGGGAAAAGTGGG
T
TCTCTGCCTCTAGAGAAGGGGAGTCCTGTTACCACCACAAAGGCGGATCCCAGGGCCTCGGGGAAAGCA
CAG
CCGCAGTCTGGTGGCAAAGCAGAAACAAAGCTCCCTGGGCAAGAGGGCGCTGCAGCACCAGGGGAAG
CA
GGGGCTGTGTGTTTGAAAAAGGAGACACCACAGGCCTCAGAGAAGGTGGATCCTGGATCCTGCAGAAA
A
GCAGAGCCCCTTGCCTCAGGGAAGGGAGAGCCTGTGTCCCTGGGGAAAGCCGACTCTGCACCTTCCAGA
AAA
ACGGAGTCCCCATCCTTGGGGAAGGTGGTCCCCCTGAGTCTGGAGAAGACCAAGCCGTCCTCCTCCT
CC
AGGCAGTTAGACCGCAAAGCCCTCGGCTCAGCCCGGTCTCCCGAGGGTGCCAGGGGCAGTGAAGGCCG
C
GTGGAGCCGAAGGCCGAGCCCGTGTCCAGCACCGAGGCCTCCAGTCTCGGCCAGAAAGACCTGGAAGCC
GCT
GGGGCCGAGAGAAGCCCCTGCCCAGAGGCCGCAGCGCCCCCGCCGGGGCCGCGGACTCGCGACAACT
TC
ACCAAGGCGCCGTCGTGGGAGGCGAGCGCCCCGCCGCCGCCGCGCGAGGACGCGGGCACTCAGGCGGG
C
GCGCAGGCCTGCGTCTCAGTGGCCGTGAGCCCCATGTCTCCGCAGGACGGCGCTGGGGGCTCGGCCTTC
AGC
TTCCAGGCGGCGCCGCGCGCGCCCAGCCCGCCCTCGCGCCGAGATGCGGGCCTGCAGGTGTCGCTGG
GC
GCCGCCGAGACGCGCTCCGTGGCCACTGGGCCCATGACACCTCAAGCCGCCGCGCCGCCCGCCTTCCC
C
GAAGTGCGGGTGCGGCCCGGCTCAGCGCTGGCGGCCGCTGTAGCGCCCCCGGAGCCGGCTGAGCCCGTG
CGA
GACGTGAGCTGGGACGAGAAGGGCATGACGTGGGAGGTATACGGCGCCGCCATGGAGGTGGAGGTGC
TG
GGCATGGCCATCCAGAAGCATCTGGAGCGACAGATCGAGGAGCACGGCCGCCAAGGGGCGCCCGCGCC
G
CCGCCCGCCGCCCGTGCCGGCCCCGGCCGTTCGGGCTCGGTGCGCACCGCGCCCCCAGATGGCGCCGCC
AAG
CGTCCGCCCGGCCTGTTCCGCGCGCTGCTGCAGAGTGTGCGCCGGCCGCGGTGCTGCTCGCGGGCGG
GA
CCCACGGCCGAGTGA


Translation (1008 aa):
MDTAEDPAWLQLLQKDSSPPGPRPTAFFCPQDGSLGAGSSAMRDYCPSQQKASPAPPRHTPDQSPGMESR
H
RSPSGAGEGASCSDGPRGSLACPSPTCFSPQESPSKETLEAHGASISGTPEATTSGKPEPVSSVKTEPK
S
SDDRNPMFLEKMDFKSSKQADSTSIGKEDPGSSRKADPMFTGKAEPEILGKGDPVAPGRMDPMTVRKED
L
GSLGKVDPLCSSKTYTVSPRKEDPGSLRKVDPVSSDKVDPVFPRKEEPRYSGKEHPVSSEKVAPTSAEK
V
DLVLSGKRDPGPSGKADPMPLESMDSASTGKTEPGLLGKLIPGSSGKNGPVSSGTGAPGSLGRLDPTCL
G
MADPASVGNVETVPATKEDSRFLGKMDPASSGEGRPVSGHTDTTASAKTDLTSLKNVDPMSSGKVDPVS
L
GKMDPMCSGKPELLSPGQAERVSVGKAGTVSPGKEDPVSSRREDPISAGSRKTSSEKVNPESSGKTNPV
S
SGPGDPRSLGTAGPPSAVKAEPATGGKGDPLSSEKAGLVASGKAAPTASGKAEPLAVGKEDPVSKGKAD
A
GPSGQGDSVSIGKVVSTPGKTVPVPSGKVDPVSLGKAEAIPEGKVGSLPLEKGSPVTTTKADPRASGKA
Q
PQSGGKAETKLPGQEGAAAPGEAGAVCLKKETPQASEKVDPGSCRKAEPLASGKGEPVSLGKADSAPSR
K
TESPSLGKVVPLSLEKTKPSSSSRQLDRKALGSARSPEGARGSEGRVEPKAEPVSSTEASSLGQKDLEA
A
GAERSPCPEAAAPPPGPRTRDNFTKAPSWEASAPPPPREDAGTQAGAQACVSVAVSPMSPQDGAGGSAF
S
FQAAPRAPSPPSRRDAGLQVSLGAAETRSVATGPMTPQAAAPPAFPEVRVRPGSALAAAVAPPEPAEPV
R
DVSWDEKGMTWEVYGAAMEVEVLGMAIQKHLERQIEEHGRQGAPAPPPAARAGPGRSGSVRTAPPDGAA
K
RPPGLFRALLQSVRRPRCCSRAGPTAE




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