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Report for CCDS44246.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44246.1 Public Homo sapiens 1 METTL25B 24 110 108 CCDS HistoryNCBI Gene:51093Re-query CCDS DB by CCDS ID:44246.1Re-query CCDS DB by GeneID:51093See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44246.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000368218.8 ENSP00000357201.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000368218.8Link to Ensembl Protein Viewer:ENSP00000357201.4Re-query CCDS DB by Nucleotide ID:ENST00000368218Re-query CCDS DB by Protein ID:ENSP00000357201
Original member Current member NCBI NM_001142560.2 NP_001136032.1 Accepted alive Link to Nucleotide Sequence:NM_001142560.2Link to Protein Sequence:NP_001136032.1Re-query CCDS DB by Nucleotide ID:NM_001142560Re-query CCDS DB by Protein ID:NP_001136032Link to BLAST:NP_001136032.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001136032.1 277 Q96FB5-2 277 100% 0 0

Chromosomal Locations for CCDS 44246.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 156729105 156729215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156731991 156732115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156732281 156732473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156732985 156733047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156733377 156733520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156735725 156735909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156736632 156736644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (834 nt):
ATGCCGGGCATCTCCGCCCGAGGCCTCTCTCATGAGGGGAGGAAGCAGCTAGCTGTTAACCTCACCCGTG
TCCTGGCACTCTACCGTTCCATCTTGGATGCCTACATCATCGAATTTTTCACAGACAACCTATGGGACAC
ACTCCCTTGCTCATGGCAGGAAGCATTGGATGGACTGAAACCACCACAGCTGGCCACAATGCTGCTGGGG
ATGCCTGGGGAAGGGGAGGTCGTCAGGTACAGGTCAGTGTGGCCACTCACCCTGCTGGCCCTGAAGTCCA
CGGCGTGTGCCCTGGCCTTTACCCGGATGCCTGGCTTTCAGACCCCCTCAGAATTCCTGGAGAACCCCAG
CCAGAGCTCCCGACTAACAGCTCCATTCCGGAAACATGTCAGGCCCAAGAAGCAGCATGAGATCCGGAGG
CTGGGAGAGTTGGTGAAGAAGCTGAGTGATTTCACAGGCTGCACCCAGGTTGTAGACGTGGGCTCAGGCC
AGGGCCATCTCTCCCGCTTCATGGCTCTTGGCCTGGGGTTGATGGTGAAGAGCATCGAAGGGGATCAGAG
ACTGGTGGAGAGAGCCCAGCGCCTGGACCAGGAGCTTCTGCAGGCTCTGGAGAAAGAGGAGAAGAGGAAC
CCGCAGATATGTGCAGCGGGGGCTACAGCGAGTGGGGCTAGATCCCCAGCTGCCACTGAATCTGGCTGCC
CTTCAGGCCCACGTGGCCCAGGAGAACCGTGTGGTGGCCTTCTTCAGCCTGGCTCTACTGCTTGCCCCAC
TGGTGGAGACGCTTATTCTACTGGACCGGCTGCTGTACCTTCAGGAACAGGGTTTCCATGCTGA

Translation (277 aa):
MPGISARGLSHEGRKQLAVNLTRVLALYRSILDAYIIEFFTDNLWDTLPCSWQEALDGLKPPQLATMLLG
MPGEGEVVRYRSVWPLTLLALKSTACALAFTRMPGFQTPSEFLENPSQSSRLTAPFRKHVRPKKQHEIRR
LGELVKKLSDFTGCTQVVDVGSGQGHLSRFMALGLGLMVKSIEGDQRLVERAQRLDQELLQALEKEEKRN
PQICAAGATASGARSPAATESGCPSGPRGPGEPCGGLLQPGSTACPTGGDAYSTGPAAVPSGTGFPC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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