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Report for CCDS44278.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44278.1 Public Homo sapiens 1 ZBTB37 24 110 108 CCDS HistoryNCBI Gene:84614Re-query CCDS DB by CCDS ID:44278.1Re-query CCDS DB by GeneID:84614See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44278.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367701.10 ENSP00000356674.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000367701.10Link to Ensembl Protein Viewer:ENSP00000356674.4Re-query CCDS DB by Nucleotide ID:ENST00000367701Re-query CCDS DB by Protein ID:ENSP00000356674
Original member Current member EBI ENST00000695459.1 ENSP00000511931.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000695459.1Link to Ensembl Protein Viewer:ENSP00000511931.1Re-query CCDS DB by Nucleotide ID:ENST00000695459Re-query CCDS DB by Protein ID:ENSP00000511931
Original member Current member NCBI NM_001122770.3 NP_001116242.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001122770.3Link to Protein Sequence:NP_001116242.1Re-query CCDS DB by Nucleotide ID:NM_001122770Re-query CCDS DB by Protein ID:NP_001116242Link to BLAST:NP_001116242.1
Original member Current member NCBI NM_001395199.1 NP_001382128.1 Accepted alive Link to Nucleotide Sequence:NM_001395199.1Link to Protein Sequence:NP_001382128.1Re-query CCDS DB by Nucleotide ID:NM_001395199Re-query CCDS DB by Protein ID:NP_001382128Link to BLAST:NP_001382128.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001116242.1 503 Q5TC79-1 503 100% 0 0
NP_001382128.1 503 Q5TC79-1 503 100% 0 0

Chromosomal Locations for CCDS 44278.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 173870226 173871148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 173873467 173873566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 173885636 173886124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1512 nt):
ATGGAGAAAGGTGGGAACATACAATTGGAGATTCCTGACTTCAGCAACTCTGTCCTGAGCCATCTAAACC
AGTTGCGCATGCAGGGCCGTCTCTGTGATATTGTGGTCAATGTGCAAGGACAAGCTTTTCGGGCTCACAA
AGTGGTGCTGGCTGCCAGCTCCCCCTATTTCCGGGATCACATGTCCTTGAATGAGATGAGTACAGTCTCC
ATTTCAGTCATCAAGAACCCTACTGTTTTTGAACAGCTCCTTTCTTTCTGTTACACAGGGCGGATATGCC
TGCAACTGGCAGATATCATCAGCTACCTAACAGCTGCCAGTTTTCTGCAAATGCAGCATATTATAGACAA
ATGTACACAGATCCTGGAGGGCATTCATTTCAAAATTAATGTGGCTGAGGTTGAAGCAGAATTAAGTCAA
ACAAGGACAAAGCATCAAGAGAGACCTCCAGAGTCTCACAGGGTTACACCAAATCTCAACCGCTCCCTTA
GCCCACGACATAATACCCCAAAGGGAAACCGGCGAGGTCAGGTTAGTGCTGTGCTGGATATCAGAGAGCT
AAGTCCTCCTGAGGAGTCCACCAGCCCTCAGATCATTGAACCAAGTTCTGATGTAGAGAGCCGGGAGCCC
ATTCTTCGGATCAACCGAGCAGGACAGTGGTATGTGGAGACAGGAGTGGCGGACCGTGGGGGTCGGAGTG
ATGATGAAGTTAGAGTTCTTGGAGCAGTACACATCAAAACTGAAAATCTGGAGGAGTGGCTTGGGCCTGA
GAATCAGCCTTCTGGAGAAGATGGGAGTAGTGCAGAGGAAGTAACAGCCATGGTGATTGATACCACAGGC
CATGGTTCTGTAGGACAGGAAAATTATACTTTAGGGTCTTCAGGAGCCAAGGTGGCTCGGCCAACAAGCA
GTGAAGTTGACAGATTTAGCCCCTCCGGCAGTGTTGTTCCCTTGACAGAGAGACACAGAGCCAGAAGTGA
GTCTCCTGGGAGAATGGATGAGCCTAAGCAACCCAGCTCCCAGGTAGAAGAGTCAGCAATGATGGGAGTA
AGTGGCTATGTGGAGTATCTCCGAGAGCAGGAAGTATCTGAGCGGTGGTTCCGGTACAACCCTCGTCTCA
CCTGCATCTATTGCGCCAAATCTTTCAACCAGAAGGGAAGCCTGGACCGCCACATGCGCCTACACATGGG
GATCACACCATTCGTCTGCCGCATGTGTGGCAAGAAGTATACCCGGAAAGATCAGCTGGAGTATCATATC
CGCAAGCACACAGGCAACAAGCCCTTTCACTGTCATGTCTGTGGCAAAAGTTTCCCCTTCCAGGCCATCT
TGAATCAGCACTTTCGCAAAAACCACCCTGGCTGTATACCCCTGGAGGGGCCTCACAGCATCTCCCCTGA
AACAACTGTCACATCTCGAGGACAAGCTGAGGAAGAGTCACCTTCACAGGAAGAGACAGTTGCTCCTGGG
GAAGCTGTCCAGGGCTCTGTGTCCACCACTGGGCCAGACTGA

Translation (503 aa):
MEKGGNIQLEIPDFSNSVLSHLNQLRMQGRLCDIVVNVQGQAFRAHKVVLAASSPYFRDHMSLNEMSTVS
ISVIKNPTVFEQLLSFCYTGRICLQLADIISYLTAASFLQMQHIIDKCTQILEGIHFKINVAEVEAELSQ
TRTKHQERPPESHRVTPNLNRSLSPRHNTPKGNRRGQVSAVLDIRELSPPEESTSPQIIEPSSDVESREP
ILRINRAGQWYVETGVADRGGRSDDEVRVLGAVHIKTENLEEWLGPENQPSGEDGSSAEEVTAMVIDTTG
HGSVGQENYTLGSSGAKVARPTSSEVDRFSPSGSVVPLTERHRARSESPGRMDEPKQPSSQVEESAMMGV
SGYVEYLREQEVSERWFRYNPRLTCIYCAKSFNQKGSLDRHMRLHMGITPFVCRMCGKKYTRKDQLEYHI
RKHTGNKPFHCHVCGKSFPFQAILNQHFRKNHPGCIPLEGPHSISPETTVTSRGQAEEESPSQEETVAPG
EAVQGSVSTTGPD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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