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Report for CCDS44297.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44297.1 Public Homo sapiens 1 LAX1 24 110 108 CCDS HistoryNCBI Gene:54900Re-query CCDS DB by CCDS ID:44297.1Re-query CCDS DB by GeneID:54900See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44297.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367217.5 ENSP00000356186.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000367217.5Link to Ensembl Protein Viewer:ENSP00000356186.5Re-query CCDS DB by Nucleotide ID:ENST00000367217Re-query CCDS DB by Protein ID:ENSP00000356186
Original member Current member NCBI NM_001136190.2 NP_001129662.1 Accepted alive Link to Nucleotide Sequence:NM_001136190.2Link to Protein Sequence:NP_001129662.1Re-query CCDS DB by Nucleotide ID:NM_001136190Re-query CCDS DB by Protein ID:NP_001129662Link to BLAST:NP_001129662.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001129662.1 382 Q8IWV1-3 382 100% 0 0

Chromosomal Locations for CCDS 44297.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 203765343 203765383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203770828 203770937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203771367 203771477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203772068 203772147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203773875 203774681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1149 nt):
ATGAGATCGCACTTCCTGCAGTGGGCATTAGCCACGTCCAGAAATAAAGACCAGATCACCAACATCTTTT
CCGGGTTTGCGGGACTCCTCGCCATCCTCCTGGTCGTTGCGGTTTTCTGCATCTTGTGGAATTGGAATAA
ACGGAAGAAGCGACAAGTTCCTTACCTCCGAGTTACCGTCATGCCCTTGCTGACTTTGCCACAAACCAGA
CAAAGAGCCAAAAATATTTATGACATCTTGCCTTGGCGACAGGAAGACCTGGGGAGACATGAGTCGAGGA
GTATGCGCATTTTCAGTACTGAGAGCCTCCTCTCCAGAAATTCTGAGAGCCCGGAGCATGTGCCCTCCCA
AGCAGGCAATGCCTTCCAGGAGCATACAGCCCACATCCATGCCACAGAGTACGCGGTGGGTATCTATGAC
AACGCCATGGTCCCCCAGATGTGTGGGAACCTCACTCCCTCGGCACACTGCATCAATGTCAGAGCTTCCA
GAGACTGCGCAAGCATTTCTTCAGAGGATTCGCATGATTATGTCAATGTCCCCACAGCAGAAGAGATTGC
TGAGACTCTAGCTTCTACCAAAAGCCCTTCCAGAAATCTCTTTGTTCTTCCCAGTACCCAGAAGCTGGAG
TTTACTGAGGAAAGAGATGAGGGCTGTGGAGATGCTGGTGACTGCACCAGTTTGTATTCTCCAGGAGCTG
AGGACAGTGATTCACTCAGCAATGGAGAAGGTTCTTCTCAGATCTCAAATGACTATGTCAACATGACAGG
GTTGGATCTCAGTGCCATCCAGGAAAGGCAGCTCTGGGTGGCTTTTCAGTGCTGCAGAGACTATGAAAAT
GTTCCAGCAGCAGATCCCAGTGGAAGCCAGCAGCAGGCTGAGAAAGATGTGCCATCCTCAAACATAGGTC
ATGTCGAGGACAAGACAGATGATCCCGGGACCCATGTCCAATGTGTCAAAAGGACATTCCTTGCTTCAGG
GGATTATGCAGACTTTCAGCCATTCACACAGAGTGAGGACAGTCAGATGAAACATAGAGAAGAGATGTCA
AATGAGGACTCCAGTGACTATGAAAATGTGCTAACTGCCAAGTTAGGAGGCAGGGACTCTGAGCAGGGGC
CTGGCACTCAGCTCCTTCCTGATGAATGA

Translation (382 aa):
MRSHFLQWALATSRNKDQITNIFSGFAGLLAILLVVAVFCILWNWNKRKKRQVPYLRVTVMPLLTLPQTR
QRAKNIYDILPWRQEDLGRHESRSMRIFSTESLLSRNSESPEHVPSQAGNAFQEHTAHIHATEYAVGIYD
NAMVPQMCGNLTPSAHCINVRASRDCASISSEDSHDYVNVPTAEEIAETLASTKSPSRNLFVLPSTQKLE
FTEERDEGCGDAGDCTSLYSPGAEDSDSLSNGEGSSQISNDYVNMTGLDLSAIQERQLWVAFQCCRDYEN
VPAADPSGSQQQAEKDVPSSNIGHVEDKTDDPGTHVQCVKRTFLASGDYADFQPFTQSEDSQMKHREEMS
NEDSSDYENVLTAKLGGRDSEQGPGTQLLPDE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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