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Report for CCDS44330.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44330.1 Public Homo sapiens 1 C1orf198 24 110 108 CCDS HistoryNCBI Gene:84886Re-query CCDS DB by CCDS ID:44330.1Re-query CCDS DB by GeneID:84886See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44330.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000470540.5 ENSP00000428172.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000470540.5Link to Ensembl Protein Viewer:ENSP00000428172.1Re-query CCDS DB by Nucleotide ID:ENST00000470540Re-query CCDS DB by Protein ID:ENSP00000428172
Original member Current member NCBI NM_001136494.2 NP_001129966.1 Accepted alive Link to Nucleotide Sequence:NM_001136494.2Link to Protein Sequence:NP_001129966.1Re-query CCDS DB by Nucleotide ID:NM_001136494Re-query CCDS DB by Protein ID:NP_001129966Link to BLAST:NP_001129966.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001129966.1 289 Q9H425-3 289 100% 0 0

Chromosomal Locations for CCDS 44330.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 230839852 230839908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 230843354 230843896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 230855668 230855718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 230868180 230868398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (870 nt):
ATGGCCAGGAAGATCATGCAGGACAAGGAGAAGATCCGCGAGAAGTACGGGCCCGAGTGGGCGCGGCTGC
CGCCCGCGCAGCAGGACGAGATCATCGACCGGTGCCTGGTGGGGCCGCGCGCCCCGGCGCCCCGAGACCC
CGGGGACTCGGAGGAGCTCACGCGCTTCCCCGGCTTGCGCGGGCCCACGGGCCAGAAGGTGGTGCGCTTC
GGGGACGAGGATCTAACTTGGCAAGATGAGCACTCTGCCCCTTTCTCCTGGGAAACAAAGAGTCAGATGG
AGTTCAGTATCTCCGCCCTATCCATCCAGGAGCCGAGCAACGGCACCGCCGCCAGCGAGCCCAGACCACT
GTCCAAAGCTTCCCAGGGCTCCCAGGCCCTCAAGTCCTCCCAAGGCAGCAGGTCCTCCAGCCTGGACGCC
CTGGGCCCCACCAGGAAGGAGGAGGAAGCGTCATTCTGGAAGATCAATGCTGAGCGGTCCCGAGGGGAGG
GGCCTGAGGCCGAGTTCCAGTCGCTGACCCCTAGCCAGATCAAGTCCATGGAGAAGGGGGAAAAGGTCTT
GCCTCCCTGCTACCGGCAGGAACCTGCCCCGAAGGACAGGGAGGCCAAGGTGGAAAGGCCCAGCACCCTC
CGTCAGGAGCAGCGTCCTCTTCCCAACGTGAGCACCGAACGTGAGAGACCCCAGCCTGTCCAGGCCTTCA
GCAGTGCACTGCACGAGGCTGCCCCCTCCCAGCTCGAGGGGAAGCTGCCATCTCCTGATGTCAGGCAGGA
CGATGGGGAAGACACCCTGTTCTCGGAACCCAAGTTTGCACAGGTCAGCTCAAGTAATGTCGTCTTGAAG
ACGGGATTTGATTTTCTGGACAATTGGTAA

Translation (289 aa):
MARKIMQDKEKIREKYGPEWARLPPAQQDEIIDRCLVGPRAPAPRDPGDSEELTRFPGLRGPTGQKVVRF
GDEDLTWQDEHSAPFSWETKSQMEFSISALSIQEPSNGTAASEPRPLSKASQGSQALKSSQGSRSSSLDA
LGPTRKEEEASFWKINAERSRGEGPEAEFQSLTPSQIKSMEKGEKVLPPCYRQEPAPKDREAKVERPSTL
RQEQRPLPNVSTERERPQPVQAFSSALHEAAPSQLEGKLPSPDVRQDDGEDTLFSEPKFAQVSSSNVVLK
TGFDFLDNW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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