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Report for CCDS4447.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4447.1 Public Homo sapiens 5 CANX 24 110 108 CCDS HistoryNCBI Gene:821Re-query CCDS DB by CCDS ID:4447.1Re-query CCDS DB by GeneID:821See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4447.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000247461.9 ENSP00000247461.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000247461.9Link to Ensembl Protein Viewer:ENSP00000247461.4Re-query CCDS DB by Nucleotide ID:ENST00000247461Re-query CCDS DB by Protein ID:ENSP00000247461
Original member Current member EBI ENST00000452673.6 ENSP00000391646.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000452673.6Link to Ensembl Protein Viewer:ENSP00000391646.2Re-query CCDS DB by Nucleotide ID:ENST00000452673Re-query CCDS DB by Protein ID:ENSP00000391646
Original member Current member EBI ENST00000509563.2 ENSP00000421434.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000509563.2Link to Ensembl Protein Viewer:ENSP00000421434.2Re-query CCDS DB by Nucleotide ID:ENST00000509563Re-query CCDS DB by Protein ID:ENSP00000421434
Original member Current member EBI ENST00000513246.6 ENSP00000421813.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000513246.6Link to Ensembl Protein Viewer:ENSP00000421813.2Re-query CCDS DB by Nucleotide ID:ENST00000513246Re-query CCDS DB by Protein ID:ENSP00000421813
Original member Current member EBI ENST00000504734.5 ENSP00000424063.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000504734.5Link to Ensembl Protein Viewer:ENSP00000424063.1Re-query CCDS DB by Nucleotide ID:ENST00000504734Re-query CCDS DB by Protein ID:ENSP00000424063
Original member Current member EBI ENST00000502296.6 ENSP00000424745.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000502296.6Link to Ensembl Protein Viewer:ENSP00000424745.2Re-query CCDS DB by Nucleotide ID:ENST00000502296Re-query CCDS DB by Protein ID:ENSP00000424745
Original member Current member EBI ENST00000681674.1 ENSP00000505013.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681674.1Link to Ensembl Protein Viewer:ENSP00000505013.1Re-query CCDS DB by Nucleotide ID:ENST00000681674Re-query CCDS DB by Protein ID:ENSP00000505013
Original member Current member EBI ENST00000680092.1 ENSP00000505202.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680092.1Link to Ensembl Protein Viewer:ENSP00000505202.1Re-query CCDS DB by Nucleotide ID:ENST00000680092Re-query CCDS DB by Protein ID:ENSP00000505202
Original member Current member EBI ENST00000681072.1 ENSP00000505526.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681072.1Link to Ensembl Protein Viewer:ENSP00000505526.1Re-query CCDS DB by Nucleotide ID:ENST00000681072Re-query CCDS DB by Protein ID:ENSP00000505526
Original member Current member EBI ENST00000680042.1 ENSP00000505960.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680042.1Link to Ensembl Protein Viewer:ENSP00000505960.1Re-query CCDS DB by Nucleotide ID:ENST00000680042Re-query CCDS DB by Protein ID:ENSP00000505960
Original member Current member EBI ENST00000681476.1 ENSP00000506003.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681476.1Link to Ensembl Protein Viewer:ENSP00000506003.1Re-query CCDS DB by Nucleotide ID:ENST00000681476Re-query CCDS DB by Protein ID:ENSP00000506003
Original member Current member EBI ENST00000681168.1 ENSP00000506021.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681168.1Link to Ensembl Protein Viewer:ENSP00000506021.1Re-query CCDS DB by Nucleotide ID:ENST00000681168Re-query CCDS DB by Protein ID:ENSP00000506021
Original member Current member EBI ENST00000681712.1 ENSP00000506061.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681712.1Link to Ensembl Protein Viewer:ENSP00000506061.1Re-query CCDS DB by Nucleotide ID:ENST00000681712Re-query CCDS DB by Protein ID:ENSP00000506061
Original member Current member EBI ENST00000680013.1 ENSP00000506078.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680013.1Link to Ensembl Protein Viewer:ENSP00000506078.1Re-query CCDS DB by Nucleotide ID:ENST00000680013Re-query CCDS DB by Protein ID:ENSP00000506078
Original member Current member EBI ENST00000681903.1 ENSP00000506509.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681903.1Link to Ensembl Protein Viewer:ENSP00000506509.1Re-query CCDS DB by Nucleotide ID:ENST00000681903Re-query CCDS DB by Protein ID:ENSP00000506509
Original member Current member EBI ENST00000681733.1 ENSP00000506568.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681733.1Link to Ensembl Protein Viewer:ENSP00000506568.1Re-query CCDS DB by Nucleotide ID:ENST00000681733Re-query CCDS DB by Protein ID:ENSP00000506568
Original member Current member EBI ENST00000680618.1 ENSP00000506583.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680618.1Link to Ensembl Protein Viewer:ENSP00000506583.1Re-query CCDS DB by Nucleotide ID:ENST00000680618Re-query CCDS DB by Protein ID:ENSP00000506583
Original member Current member NCBI NM_001024649.2 NP_001019820.1 Accepted alive Link to Nucleotide Sequence:NM_001024649.2Link to Protein Sequence:NP_001019820.1Re-query CCDS DB by Nucleotide ID:NM_001024649Re-query CCDS DB by Protein ID:NP_001019820Link to BLAST:NP_001019820.1
Original member Current member NCBI NM_001363996.1 NP_001350925.1 Accepted alive Link to Nucleotide Sequence:NM_001363996.1Link to Protein Sequence:NP_001350925.1Re-query CCDS DB by Nucleotide ID:NM_001363996Re-query CCDS DB by Protein ID:NP_001350925Link to BLAST:NP_001350925.1
Original member Current member NCBI NM_001363997.1 NP_001350926.1 Accepted alive Link to Nucleotide Sequence:NM_001363997.1Link to Protein Sequence:NP_001350926.1Re-query CCDS DB by Nucleotide ID:NM_001363997Re-query CCDS DB by Protein ID:NP_001350926Link to BLAST:NP_001350926.1
Original member Current member NCBI NM_001746.4 NP_001737.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001746.4Link to Protein Sequence:NP_001737.1Re-query CCDS DB by Nucleotide ID:NM_001746Re-query CCDS DB by Protein ID:NP_001737Link to BLAST:NP_001737.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001019820.1 592 P27824-1 592 100% 0 0
NP_001350925.1 592 P27824-1 592 100% 0 0
NP_001350926.1 592 P27824-1 592 100% 0 0
NP_001737.1 592 P27824-1 592 100% 0 0

Chromosomal Locations for CCDS 4447.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 179705682 179705852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179706258 179706331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179707132 179707190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179708239 179708380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179708978 179709059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179709873 179710065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179716105 179716294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179719668 179719781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179720404 179720560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179722804 179723019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179723660 179723779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179724657 179724783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179726680 179726759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179728591 179728644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1779 nt):
ATGGAAGGGAAGTGGTTGCTGTGTATGTTACTGGTGCTTGGAACTGCTATTGTTGAGGCTCATGATGGAC
ATGATGATGATGTGATTGATATTGAGGATGACCTTGACGATGTCATTGAAGAGGTAGAAGACTCAAAACC
AGATACCACTGCTCCTCCTTCATCTCCCAAGGTTACTTACAAAGCTCCAGTTCCAACAGGGGAAGTATAT
TTTGCTGATTCTTTTGACAGAGGAACTCTGTCAGGGTGGATTTTATCCAAAGCCAAGAAAGACGATACCG
ATGATGAAATTGCCAAATATGATGGAAAGTGGGAGGTAGAGGAAATGAAGGAGTCAAAGCTTCCAGGTGA
TAAAGGACTTGTGTTGATGTCTCGGGCCAAGCATCATGCCATCTCTGCTAAACTGAACAAGCCCTTCCTG
TTTGACACCAAGCCTCTCATTGTTCAGTATGAGGTTAATTTCCAAAATGGAATAGAATGTGGTGGTGCCT
ATGTGAAACTGCTTTCTAAAACACCAGAACTCAACCTGGATCAGTTCCATGACAAGACCCCTTATACGAT
TATGTTTGGTCCAGATAAATGTGGAGAGGACTATAAACTGCACTTCATCTTCCGACACAAAAACCCCAAA
ACGGGTATCTATGAAGAAAAACATGCTAAGAGGCCAGATGCAGATCTGAAGACCTATTTTACTGATAAGA
AAACACATCTTTACACACTAATCTTGAATCCAGATAATAGTTTTGAAATACTGGTTGACCAATCTGTGGT
GAATAGTGGAAATCTGCTCAATGACATGACTCCTCCTGTAAATCCTTCACGTGAAATTGAGGACCCAGAA
GACCGGAAGCCCGAGGATTGGGATGAAAGACCAAAAATCCCAGATCCAGAAGCTGTCAAGCCAGATGACT
GGGATGAAGATGCCCCTGCTAAGATTCCAGATGAAGAGGCCACAAAACCCGAAGGCTGGTTAGATGATGA
GCCTGAGTACGTACCTGATCCAGACGCAGAGAAACCTGAGGATTGGGATGAAGACATGGATGGAGAATGG
GAGGCTCCTCAGATTGCCAACCCTAGATGTGAGTCAGCTCCTGGATGTGGTGTCTGGCAGCGACCTGTGA
TTGACAACCCCAATTATAAAGGCAAATGGAAGCCTCCTATGATTGACAATCCCAGTTACCAGGGAATCTG
GAAACCCAGGAAAATACCAAATCCAGATTTCTTTGAAGATCTGGAACCTTTCAGAATGACTCCTTTTAGT
GCTATTGGTTTGGAGCTGTGGTCCATGACCTCTGACATTTTTTTTGACAACTTTATCATTTGTGCTGATC
GAAGAATAGTTGATGATTGGGCCAATGATGGATGGGGCCTGAAGAAAGCTGCTGATGGGGCTGCTGAGCC
AGGCGTTGTGGGGCAGATGATCGAGGCAGCTGAAGAGCGCCCGTGGCTGTGGGTAGTCTATATTCTAACT
GTAGCCCTTCCTGTGTTCCTGGTTATCCTCTTCTGCTGTTCTGGAAAGAAACAGACCAGTGGTATGGAGT
ATAAGAAAACTGATGCACCTCAACCGGATGTGAAGGAAGAGGAAGAAGAGAAGGAAGAGGAAAAGGACAA
GGGAGATGAGGAGGAGGAAGGAGAAGAGAAACTTGAAGAGAAACAGAAAAGTGATGCTGAAGAAGATGGT
GGCACTGTCAGTCAAGAGGAGGAAGACAGAAAACCTAAAGCAGAGGAGGATGAAATTTTGAACAGATCAC
CAAGAAACAGAAAGCCACGAAGAGAGTGA

Translation (592 aa):
MEGKWLLCMLLVLGTAIVEAHDGHDDDVIDIEDDLDDVIEEVEDSKPDTTAPPSSPKVTYKAPVPTGEVY
FADSFDRGTLSGWILSKAKKDDTDDEIAKYDGKWEVEEMKESKLPGDKGLVLMSRAKHHAISAKLNKPFL
FDTKPLIVQYEVNFQNGIECGGAYVKLLSKTPELNLDQFHDKTPYTIMFGPDKCGEDYKLHFIFRHKNPK
TGIYEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSVVNSGNLLNDMTPPVNPSREIEDPE
DRKPEDWDERPKIPDPEAVKPDDWDEDAPAKIPDEEATKPEGWLDDEPEYVPDPDAEKPEDWDEDMDGEW
EAPQIANPRCESAPGCGVWQRPVIDNPNYKGKWKPPMIDNPSYQGIWKPRKIPNPDFFEDLEPFRMTPFS
AIGLELWSMTSDIFFDNFIICADRRIVDDWANDGWGLKKAADGAAEPGVVGQMIEAAEERPWLWVVYILT
VALPVFLVILFCCSGKKQTSGMEYKKTDAPQPDVKEEEEEKEEEKDKGDEEEEGEEKLEEKQKSDAEEDG
GTVSQEEEDRKPKAEEDEILNRSPRNRKPRRE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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