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Report for CCDS44506.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44506.1 Public Homo sapiens 11 RASSF7 24 110 108 CCDS HistoryNCBI Gene:8045Re-query CCDS DB by CCDS ID:44506.1Re-query CCDS DB by GeneID:8045See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44506.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000397582.7 ENSP00000380712.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397582.7Link to Ensembl Protein Viewer:ENSP00000380712.3Re-query CCDS DB by Nucleotide ID:ENST00000397582Re-query CCDS DB by Protein ID:ENSP00000380712
Original member Current member EBI ENST00000431809.5 ENSP00000403068.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000431809.5Link to Ensembl Protein Viewer:ENSP00000403068.1Re-query CCDS DB by Nucleotide ID:ENST00000431809Re-query CCDS DB by Protein ID:ENSP00000403068
Original member Current member NCBI NM_001143993.2 NP_001137465.1 Accepted alive Link to Nucleotide Sequence:NM_001143993.2Link to Protein Sequence:NP_001137465.1Re-query CCDS DB by Nucleotide ID:NM_001143993Re-query CCDS DB by Protein ID:NP_001137465Link to BLAST:NP_001137465.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001137465.1 337 Q02833-2 337 100% 0 0

Chromosomal Locations for CCDS 44506.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 561769 561892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 562079 562776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 563189 563380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1014 nt):
ATGTTGTTGGGACTGGCGGCCATGGAGCTGAAGGTGTGGGTGGATGGCATCCAGCGTGTGGTCTGTGGGG
TCTCAGAGCAGACCACCTGCCAGGAAGTGGTCATCGCACTAGCCCAAGCAATAGGCCAGACTGGCCGCTT
TGTGCTTGTGCAGCGGCTTCGGGAGAAGGAGCGGCAGTTGCTGCCACAAGAGTGTCCAGTGGGCGCCCAG
GCCACCTGCGGACAGTTTGCCAGCGATGTCCAGTTTGTCCTGAGGCGCACAGGGCCCAGCCTAGCTGGGA
GGCCCTCCTCAGACAGCTGTCCACCCCCGGAACGCTGCCTAATTCGTGCCAGCCTCCCTGTAAAGCCACG
GGCTGCGCTGGGCTGTGAGCCCCGCAAAACACTGACCCCCGAGCCAGCCCCCAGCCTCTCACGCCCTGGG
CCTGCGGCCCCTGTGACACCCACACCAGGCTGCTGCACAGACCTGCGGGGCCTGGAGCTCAGGGTGCAGA
GGAATGCTGAGGAGCTGGGCCATGAGGCCTTCTGGGAGCAAGAGCTGCGCCGGGAGCAGGCCCGGGAGCG
AGAGGGACAGGCACGCCTGCAGGCACTAAGTGCGGCCACTGCTGAGCATGCCGCCCGGCTGCAGGCCCTG
GACGCTCAGGCCCGTGCCCTGGAGGCTGAGCTGCAGCTGGCAGCGGAGGCCCCTGGGCCCCCCTCACCTA
TGGCATCTGCCACTGAGCGCCTGCACCAGGACCTGGCTGTTCAGGAGCGGCAGAGTGCGGAGGTGCAGGG
CAGCCTGGCTCTGGTGAGCCGGGCCCTGGAGGCAGCAGAGCGAGCCTTGCAGGCTCAGGCTCAGGAGCTG
GAGGAGCTGAACCGAGAGCTCCGTCAGTGCAACCTGCAGCAGTTCATCCAGCAGACCGGGGCTGCGCTGC
CACCGCCCCCACGGCCTGACAGGGGCCCTCCTGGCACTCAGGTCGGAGTGGTTCTGGGGGGAGGCTGGGA
GGTGAGGACCTGGCCCAGCCCCACTCCAAGCTGA

Translation (337 aa):
MLLGLAAMELKVWVDGIQRVVCGVSEQTTCQEVVIALAQAIGQTGRFVLVQRLREKERQLLPQECPVGAQ
ATCGQFASDVQFVLRRTGPSLAGRPSSDSCPPPERCLIRASLPVKPRAALGCEPRKTLTPEPAPSLSRPG
PAAPVTPTPGCCTDLRGLELRVQRNAEELGHEAFWEQELRREQAREREGQARLQALSAATAEHAARLQAL
DAQARALEAELQLAAEAPGPPSPMASATERLHQDLAVQERQSAEVQGSLALVSRALEAAERALQAQAQEL
EELNRELRQCNLQQFIQQTGAALPPPPRPDRGPPGTQVGVVLGGGWEVRTWPSPTPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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