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Report for CCDS44582.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
44582.1 |
Public |
Homo sapiens |
11 |
ATG13 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:9776](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:44582.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:9776](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 11 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 44582.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000359513.8 |
ENSP00000352500.4 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000359513.8](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000352500.4](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000359513](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000352500](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000526508.5 |
ENSP00000431974.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000526508.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000431974.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000526508](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000431974](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001142673.3 |
NP_001136145.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001142673.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001136145.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001142673](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001136145](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001136145.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001205120.2 |
NP_001192049.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001205120.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001192049.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001205120](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001192049](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001192049.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001346319.2 |
NP_001333248.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001346319.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001333248.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001346319](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001333248](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001333248.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001346320.2 |
NP_001333249.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001346320.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001333249.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001346320](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001333249](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001333249.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001346321.2 |
NP_001333250.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001346321.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001333250.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001346321](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001333250](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001333250.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001346322.2 |
NP_001333251.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001346322.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001333251.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001346322](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001333251](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001333251.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001346323.2 |
NP_001333252.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001346323.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001333252.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001346323](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001333252](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001333252.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001346324.2 |
NP_001333253.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001346324.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001333253.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001346324](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001333253](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001333253.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001346325.2 |
NP_001333254.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001346325.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001333254.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001346325](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001333254](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001333254.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001346326.2 |
NP_001333255.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001346326.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001333255.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001346326](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001333255](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001333255.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001346327.2 |
NP_001333256.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001346327.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001333256.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001346327](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001333256](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001333256.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001346328.2 |
NP_001333257.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001346328.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001333257.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001346328](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001333257](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001333257.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001346329.2 |
NP_001333258.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001346329.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001333258.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001346329](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001333258](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001333258.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001346330.2 |
NP_001333259.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001346330.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001333259.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001346330](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001333259](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001333259.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001346331.2 |
NP_001333260.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001346331.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001333260.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001346331](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001333260](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001333260.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001346332.2 |
NP_001333261.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001346332.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001333261.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001346332](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001333261](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001333261.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 44582.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1554 nt): ATGGAAACTGATCTCAATTCCCAGGACAGAAAGGACCTGGACAAGTTTATTAAATTTTTTGCCCTCAAGA CTGTCCAAGTGATTGTCCAGGCTCGGCTTGGTGAAAAGATTTGCACTCGTTCATCATCTTCTCCAACGGG TTCAGATTGGTTCAACTTAGCAATCAAAGACATCCCAGAGGTTACACATGAAGCAAAGAAGGCACTGGCA GGACAGCTGCCTGCAGTCGGGAGGTCCATGTGTGTGGAGATTTCACTTAAGACTTCTGAGGGAGATTCCA TGGAGCTGGAAATATGGTGTCTTGAAATGAATGAAAAGTGTGATAAAGAAATCAAAGTTTCCTACACGGT GTACAACAGACTGTCATTGCTGCTGAAGTCCCTTCTTGCTATAACTAGGGTGACACCAGCCTATAGGCTC TCCAGGAAACAAGGGCATGAATATGTCATATTATACAGGATATATTTTGGAGAAGTTCAGCTGAGTGGCT TAGGAGAAGGCTTCCAGACAGTTCGTGTTGGGACAGTGGGCACCCCTGTGGGCACCATCACTCTTTCTTG TGCTTACAGAATTAACTTGGCATTCATGTCTACCAGGCAATTTGAGAGGACCCCACCTATCATGGGGATT ATTATTGATCACTTTGTGGACCGTCCCTATCCCAGCTCCTCTCCCATGCACCCCTGCAATTACAGAACTG CTGGTGAGGACACTGGAGTAATATACCCGTCTGTAGAAGACTCTCAAGAAGTGTGTACCACCTCTTTTTC CACCTCCCCACCATCCCAGCTCTCAAGCTCTCGCCTTTCCTATCAGCCTGCTGCCCTGGGCGTTGGATCA GCTGACCTGGCTTATCCAGTAGTGTTTGCTGCTGGCTTAAATGCTACACACCCTCACCAGCTGATGGTTC CTGGGAAGGAAGGTGGGGTACCCCTTGCTCCCAACCAGCCTGTCCATGGTACCCAGGCTGACCAGGAGAG ACTGGCAACCTGCACCCCTTCTGACAGAACCCACTGTGCTGCCACACCCTCCAGTAGTGAGGATACTGAA ACCGTATCAAACAGCAGTGAGGGACGGGCCTCCCCTCACGATGTCTTGGAGACCATCTTTGTCCGAAAAG TGGGGGCTTTTGTCAACAAACCCATTAACCAGGTGACCCTGACGAGTTTGGATATACCCTTTGCCATGTT TGCTCCCAAGAATTTGGAGCTGGAGGATACCGATCCAATGGTGAATCCTCCAGATTCCCCAGAGACTGAA TCTCCTCTCCAGGGCAGCCTGCACTCAGATGGCTCCAGCGGGGGCAGCAGTGGCAATACCCATGATGACT TTGTTATGATAGACTTTAAACCAGCTTTTTCTAAAGATGACATTCTTCCGATGGACCTGGGGACCTTCTA TCGGGAGTTTCAGAACCCACCTCAGCTGAGCAGCCTCTCCATAGATATTGGAGCACAGTCCATGGCTGAA GACTTGGACTCATTACCAGAGAAGCTGGCTGTGCATGAGAAGAATGTCCGCGAGTTTGATGCCTTTGTGG AAACCCTGCAGTAA
Translation (517 aa): METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPEVTHEAKKALA GQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNRLSLLLKSLLAITRVTPAYRL SRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPVGTITLSCAYRINLAFMSTRQFERTPPIMGI IIDHFVDRPYPSSSPMHPCNYRTAGEDTGVIYPSVEDSQEVCTTSFSTSPPSQLSSSRLSYQPAALGVGS ADLAYPVVFAAGLNATHPHQLMVPGKEGGVPLAPNQPVHGTQADQERLATCTPSDRTHCAATPSSSEDTE TVSNSSEGRASPHDVLETIFVRKVGAFVNKPINQVTLTSLDIPFAMFAPKNLELEDTDPMVNPPDSPETE SPLQGSLHSDGSSGGSSGNTHDDFVMIDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAE DLDSLPEKLAVHEKNVREFDAFVETLQ
|