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Report for CCDS44649.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44649.1 Public Homo sapiens 11 EHBP1L1 24 110 108 CCDS HistoryNCBI Gene:254102Re-query CCDS DB by CCDS ID:44649.1Re-query CCDS DB by GeneID:254102See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44649.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000309295.9 ENSP00000312671.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000309295.9Link to Ensembl Protein Viewer:ENSP00000312671.4Re-query CCDS DB by Nucleotide ID:ENST00000309295Re-query CCDS DB by Protein ID:ENSP00000312671
Original member Current member NCBI NM_001099409.3 NP_001092879.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001099409.3Link to Protein Sequence:NP_001092879.1Re-query CCDS DB by Nucleotide ID:NM_001099409Re-query CCDS DB by Protein ID:NP_001092879Link to BLAST:NP_001092879.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001092879.1 1523 Q8N3D4 1523 100% 0 0

Chromosomal Locations for CCDS 44649.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 65576303 65576406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65579078 65579135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65579341 65579436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65579936 65579989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65580081 65580259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65580337 65580479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65581058 65581126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65581211 65581373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65581539 65583765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65584241 65584398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65584486 65584534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65584959 65585591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65589751 65589820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65589936 65589991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65590087 65590210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65590493 65590592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65591800 65591873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65591976 65592090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65592203 65592302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4572 nt):
ATGACCTCGGTGTGGAAGCGCCTGCAGCGCGTGGGCAAGCGGGCGGCCAAGTTCCAGTTCGTGGCCTGTT
ACCACGAGCTAGTGTTGGAGTGCACCAAGAAATGGCAGCCAGATAAGCTGGTGGTGGTATGGACCCGTCG
GAACCGACGCATCTGCTCCAAGGCCCACAGCTGGCAGCCGGGCATCCAGAACCCATACCGGGGCACCGTG
GTGTGGATGGTACCTGAGAATGTGGACATCTCTGTGACCCTCTACAGGGACCCCCACGTGGACCAGTATG
AGGCCAAAGAGTGGACATTTATTATTGAAAATGAGTCTAAGGGGCAGCGGAAGGTGCTGGCCACGGCCGA
GGTGGACCTGGCCCGCCATGCAGGGCCCGTGCCTGTCCAAGTCCCAGTGAGGCTGCGGCTGAAGCCAAAG
TCAGTGAAGGTGGTGCAGGCTGAGCTGAGCCTCACTCTTTCCGGGGTGCTGCTGCGGGAGGGCCGTGCCA
CGGACGATGACATGCAGAGTCTCGCAAGCCTCATGAGTGTGAAGCCTAGTGATGTGGGCAACTTGGATGA
CTTTGCTGAGAGTGATGAAGATGAGGCTCATGGCCCAGGAGCCCCGGAGGCCCGGGCTCGAGTCCCCCAG
CCAGATCCCTCTCGAGAGCTGAAGACGCTTTGTGAGGAGGAGGAGGAAGGCCAAGGACGACCCCAGCAGG
CAGTTGCCAGCCCTTCTAATGCTGAGGATACCAGCCCAGCCCCTGTGAGTGCTCCTGCACCCCCAGCCAG
AACCTCCCGAGGCCAGGGGTCAGAACGAGCTAATGAAGCGGGGGGCCAGGTAGGCCCTGAGGCCCCAAGG
CCCCCGGAAACCTCACCAGAGATGAGGTCTTCAAGGCAGCCAGCCCAGGACACGGCCCCCACCCCAGCCC
CTCGGCTCCGGAAAGGCTCTGATGCCCTCCGGCCCCCAGTCCCCCAGGGGGAAGATGAGGTCCCCAAAGC
CTCAGGGGCTCCTCCAGCAGGATTGGGCTCTGCTAGGGAGACCCAGGCCCAGGCATGCCCTCAGGAAGGG
ACAGAAGCCCATGGAGCTAGGCTGGGCCCGAGCATTGAGGATAAAGGTTCTGGAGACCCTTTTGGAAGGC
AGAGACTCAAGGCTGAAGAGATGGACACTGAGGACAGGCCAGAGGCCAGTGGGGTGGACACTGAGCCAAG
GTCAGGAGGCAGAGAGGCAAACACTAAGAGGTCAGGAGTCAGAGCTGGGGAGGCTGAAGAGAGTTCAGCA
GTTTGTCAAGTGGATGCTGAGCAGAGGTCAAAGGTGAGACATGTGGACACTAAGGGACCAGAGGCGACAG
GGGTGATGCCTGAGGCAAGATGCAGGGGGACCCCTGAGGCTCCTCCAAGGGGCTCTCAGGGGAGGCTGGG
AGTCAGGACCAGGGATGAGGCTCCCTCAGGCCTGAGCCTGCCCCCAGCGGAGCCTGCAGGGCACTCTGGG
CAACTTGGTGACCTCGAGGGGGCCAGGGCTGCTGCAGGCCAGGAGAGAGAGGGTGCAGAAGTGAGGGGTG
GAGCACCTGGTATTGAGGGGACAGGCCTGGAGCAGGGCCCTTCTGTTGGAGCAATAAGCACCAGGCCCCA
GGTGAGCAGCTGGCAGGGGGCCCTGTTATCAACTGCCCAGGGGGCAATATCCAGGGGTCTGGGAGGCTGG
GAGGCAGAAGCTGGGGGTTCAGGGGACCTGGAAACAGAGACTGAGGTGGTAGGGTTGGAGGTGCTGGGAA
CCCAGGAGAAAGAAGTTGAGGGGTCAGGGTTCCCAGAGACTAGGACACTAGAAATTGAGATATTGGGGGC
CTTGGAGAAAGAAGCAGCAAGATCAAGGGTCCTGGAGTCAGAGGTTGCTGGGACAGCACAGTGTGAGGGA
CTGGAGACCCAGGAAACAGAGGTGGGGGTCATAGAGACCCCAGGGACAGAGACTGAGGTATTGGGGACCC
AGAAAACAGAAGCTGGGGGTTCAGGAGTTTTGCAGACAAGAACTACGATAGCAGAGACTGAGGTACTGGT
GACCCAGGAGATATCTGGGGATTTAGGGCCACTGAAGATAGAAGATACAATACAGTCTGAGATGCTGGGG
ACCCAGGAGACAGAGGTGGAAGCTTCTAGGGTACCAGAGTCAGAGGCTGAGGGGACAGAAGCTAAAATAT
TAGGGACCCAGGAGATAACAGCTAGGGATTCAGGGGTCAGAGAGATAGAAGCAGAGATAGCAGAGTCTGA
CATATTGGTAGCCCAGGAGATAGAGGTGGGACTTTTGGGGGTTCTGGGAATAGAGACTGGGGCAGCAGAA
GGTGCGATATTGGGGACCCAAGAGATAGCATCTAGGGATTCAGGGGTCCCAGGGTTAGAAGCTGATACAA
CAGGGATCCAGGTGAAAGAGGTTGGGGGTTCAGAGGTTCCAGAGATAGCGACTGGGACAGCAGAAACTGA
GATATTGGGGACCCAAGAGATAGCATCTAGGAGTTCAGGGGTCCCAGGGCTAGAATCTGAGGTAGCTGGG
GCCCAGGAGACAGAGGTCGGGGGTTCAGGGATCTCAGGGCCCGAGGCTGGAATGGCAGAGGCCCGAGTAC
TGATGACCCGTAAGACAGAAATTATAGTTCCAGAGGCTGAGAAGGAAGAGGCTCAGACTTCGGGGGTCCA
GGAAGCAGAGACTAGAGTTGGGAGTGCTCTCAAATATGAGGCTTTAAGGGCCCCAGTCACTCAGCCAAGA
GTTTTAGGATCCCAGGAAGCAAAAGCAGAGATTTCAGGAGTACAAGGGTCAGAGACTCAAGTTCTGAGAG
TCCAGGAGGCAGAGGCTGGGGTTTGGGGGATGTCAGAGGGCAAATCTGGGGCTTGGGGGGCCCAGGAAGC
AGAGATGAAGGTTTTAGAGTCTCCAGAGAACAAATCTGGTACTTTTAAGGCCCAGGAAGCGGAGGCTGGG
GTCTTGGGAAATGAGAAGGGGAAAGAAGCTGAGGGAAGCCTCACAGAGGCCAGCCTGCCTGAAGCACAGG
TGGCCAGTGGGGCAGGGGCTGGGGCGCCCAGGGCCTCTTCCCCAGAGAAGGCTGAAGAGGACAGGAGGCT
GCCGGGCAGCCAGGCACCACCTGCCCTGGTCAGCTCCAGCCAGTCCCTGCTGGAGTGGTGCCAGGAAGTC
ACCACTGGCTACCGTGGCGTCCGCATCACCAACTTCACCACATCCTGGCGCAACGGCTTGGCCTTCTGTG
CCATCCTGCACCGATTCTACCCAGACAAGATTGACTATGCCTCGCTAGACCCACTCAACATCAAGCAGAA
CAACAAGCAGGCCTTCGATGGCTTCGCGGCTCTGGGCGTGTCGCGGCTGCTGGAGCCCGCGGACATGGTG
CTACTGTCGGTGCCCGACAAGCTCATCGTCATGACGTACCTGTGCCAGATCCGCGCCTTCTGCACCGGGC
AGGAGCTGCAGCTGGTACAACTGGAGGGCGGCGGCGGCGCCGGCACGTACCGCGTGGGCAGCGCCCAGCC
CAGCCCGCCCGACGACCTGGACGCCGGAGGCCTGGCGCAGCGGCTGCGCGGTCACGGGGCCGAGGGGCCC
CAGGAGCCCAAGGAGGCCGCAGACCGCGCAGACGGGGCGGCCCCGGGGGTGGCCTCCAGGAACGCGGTCG
CGGGCCGCGCCTCCAAGGACGGCGGGGCCGAGGCCCCCCGAGAGTCGCGACCCGCGGAGGTCCCGGCCGA
GGGGCTGGTGAACGGGGCGGGGGCACCGGGCGGCGGCGGCGTGAGGCTGCGACGGCCCTCGGTCAACGGG
GAGCCCGGGTCGGTGCCCCCGCCCCGCGCGCACGGCTCCTTCTCCCACGTGCGCGACGCGGACCTGCTCA
AGAAGAGGCGCTCGCGGCTGCGGAACAGCAGCTCGTTCTCGATGGACGATCCGGACGCGGGAGCCATGGG
AGCTGCGGCTGCAGAAGGCCAGGCCCCTGACCCCAGCCCTGCCCCAGGCCCACCCACAGCTGCAGACTCT
CAACAGCCCCCTGGTGGGAGTTCCCCCTCGGAGGAACCACCCCCAAGCCCAGGGGAGGAGGCTGGGCTGC
AACGGTTCCAGGACACAAGTCAGTACGTGTGTGCAGAGCTGCAGGCCCTGGAACAGGAGCAGAGGCAGAT
AGATGGGCGGGCGGCTGAGGTGGAGATGCAGCTGAGGAGCCTCATGGAGTCAGGTGCCAACAAGCTGCAG
GAGGAGGTGCTGATCCAGGAGTGGTTCACCCTGGTCAACAAGAAGAACGCTCTCATCCGGAGGCAGGACC
AGCTGCAGCTGCTCATGGAGGAGCAGGACTTGGAGCGAAGGTTCGAGCTGCTGAGCCGCGAGCTGCGGGC
CATGCTGGCCATCGAAGACTGGCAGAAAACGTCCGCTCAGCAGCACCGAGAGCAGCTCCTACTGGAGGAG
CTGGTGTCGCTGGTGAACCAGCGCGATGAGCTAGTCCGGGACCTGGACCACAAGGAGCGGATCGCCCTGG
AGGAGGACGAGCGCCTGGAGCGCGGCCTGGAACAGCGGCGCCGCAAGCTGAGCCGGCAGTTGAGCCGGCG
GGAGCGCTGCGTGCTGAGCTGA

Translation (1523 aa):
MTSVWKRLQRVGKRAAKFQFVACYHELVLECTKKWQPDKLVVVWTRRNRRICSKAHSWQPGIQNPYRGTV
VWMVPENVDISVTLYRDPHVDQYEAKEWTFIIENESKGQRKVLATAEVDLARHAGPVPVQVPVRLRLKPK
SVKVVQAELSLTLSGVLLREGRATDDDMQSLASLMSVKPSDVGNLDDFAESDEDEAHGPGAPEARARVPQ
PDPSRELKTLCEEEEEGQGRPQQAVASPSNAEDTSPAPVSAPAPPARTSRGQGSERANEAGGQVGPEAPR
PPETSPEMRSSRQPAQDTAPTPAPRLRKGSDALRPPVPQGEDEVPKASGAPPAGLGSARETQAQACPQEG
TEAHGARLGPSIEDKGSGDPFGRQRLKAEEMDTEDRPEASGVDTEPRSGGREANTKRSGVRAGEAEESSA
VCQVDAEQRSKVRHVDTKGPEATGVMPEARCRGTPEAPPRGSQGRLGVRTRDEAPSGLSLPPAEPAGHSG
QLGDLEGARAAAGQEREGAEVRGGAPGIEGTGLEQGPSVGAISTRPQVSSWQGALLSTAQGAISRGLGGW
EAEAGGSGDLETETEVVGLEVLGTQEKEVEGSGFPETRTLEIEILGALEKEAARSRVLESEVAGTAQCEG
LETQETEVGVIETPGTETEVLGTQKTEAGGSGVLQTRTTIAETEVLVTQEISGDLGPLKIEDTIQSEMLG
TQETEVEASRVPESEAEGTEAKILGTQEITARDSGVREIEAEIAESDILVAQEIEVGLLGVLGIETGAAE
GAILGTQEIASRDSGVPGLEADTTGIQVKEVGGSEVPEIATGTAETEILGTQEIASRSSGVPGLESEVAG
AQETEVGGSGISGPEAGMAEARVLMTRKTEIIVPEAEKEEAQTSGVQEAETRVGSALKYEALRAPVTQPR
VLGSQEAKAEISGVQGSETQVLRVQEAEAGVWGMSEGKSGAWGAQEAEMKVLESPENKSGTFKAQEAEAG
VLGNEKGKEAEGSLTEASLPEAQVASGAGAGAPRASSPEKAEEDRRLPGSQAPPALVSSSQSLLEWCQEV
TTGYRGVRITNFTTSWRNGLAFCAILHRFYPDKIDYASLDPLNIKQNNKQAFDGFAALGVSRLLEPADMV
LLSVPDKLIVMTYLCQIRAFCTGQELQLVQLEGGGGAGTYRVGSAQPSPPDDLDAGGLAQRLRGHGAEGP
QEPKEAADRADGAAPGVASRNAVAGRASKDGGAEAPRESRPAEVPAEGLVNGAGAPGGGGVRLRRPSVNG
EPGSVPPPRAHGSFSHVRDADLLKKRRSRLRNSSSFSMDDPDAGAMGAAAAEGQAPDPSPAPGPPTAADS
QQPPGGSSPSEEPPPSPGEEAGLQRFQDTSQYVCAELQALEQEQRQIDGRAAEVEMQLRSLMESGANKLQ
EEVLIQEWFTLVNKKNALIRRQDQLQLLMEEQDLERRFELLSRELRAMLAIEDWQKTSAQQHREQLLLEE
LVSLVNQRDELVRDLDHKERIALEEDERLERGLEQRRRKLSRQLSRRERCVLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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