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Report for CCDS4468.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4468.1 Public Homo sapiens 6 DUSP22 24 110 108 CCDS HistoryNCBI Gene:56940Re-query CCDS DB by CCDS ID:4468.1Re-query CCDS DB by GeneID:56940See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4468.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000344450.9 ENSP00000345281.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000344450.9Link to Ensembl Protein Viewer:ENSP00000345281.5Re-query CCDS DB by Nucleotide ID:ENST00000344450Re-query CCDS DB by Protein ID:ENSP00000345281
Original member Current member NCBI NM_020185.6 NP_064570.1 Accepted alive Link to Nucleotide Sequence:NM_020185.6Link to Protein Sequence:NP_064570.1Re-query CCDS DB by Nucleotide ID:NM_020185Re-query CCDS DB by Protein ID:NP_064570Link to BLAST:NP_064570.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_064570.1 184 Q9NRW4-1 184 100% 0 0

Chromosomal Locations for CCDS 4468.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 292540 292560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 304628 304661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 311880 311962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 335114 335163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 345854 345928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 348103 348274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 348769 348841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 350822 350868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (555 nt):
ATGGGGAATGGGATGAACAAGATCCTGCCCGGCCTGTACATCGGCAACTTCAAAGATGCCAGAGACGCGG
AACAATTGAGCAAGAACAAGGTGACACATATTCTGTCTGTCCACGATAGTGCCAGGCCTATGTTGGAGGG
AGTTAAATACCTGTGCATCCCAGCAGCGGATTCACCATCTCAAAACCTGACAAGACATTTCAAAGAAAGT
ATTAAATTCATTCACGAGTGCCGGCTCCGCGGTGAGAGCTGCCTTGTACACTGCCTGGCCGGGGTCTCCA
GGAGCGTGACACTGGTGATCGCATACATCATGACCGTCACTGACTTTGGCTGGGAGGATGCCCTGCACAC
CGTGCGTGCTGGGAGATCCTGTGCCAACCCCAACGTGGGCTTCCAGAGACAGCTCCAGGAGTTTGAGAAG
CATGAGGTCCATCAGTATCGGCAGTGGCTGAAGGAAGAATATGGAGAGAGCCCTTTGCAGGATGCAGAAG
AAGCCAAAAACATTCTGGCCGCTCCGGGAATTCTGAAGTTCTGGGCCTTTCTCAGAAGACTGTAA

Translation (184 aa):
MGNGMNKILPGLYIGNFKDARDAEQLSKNKVTHILSVHDSARPMLEGVKYLCIPAADSPSQNLTRHFKES
IKFIHECRLRGESCLVHCLAGVSRSVTLVIAYIMTVTDFGWEDALHTVRAGRSCANPNVGFQRQLQEFEK
HEVHQYRQWLKEEYGESPLQDAEEAKNILAAPGILKFWAFLRRL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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