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Report for CCDS44751.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
44751.1 |
Public |
Homo sapiens |
11 |
DDX6 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:1656](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:44751.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:1656](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 11 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 44751.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000526070.2 |
ENSP00000433704.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000526070.2](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000433704.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000526070](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000433704](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000534980.7 |
ENSP00000442266.1 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000534980.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000442266.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000534980](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000442266](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000620157.4 |
ENSP00000478754.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000620157.4](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000478754.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000620157](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000478754](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001257191.3 |
NP_001244120.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001257191.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001244120.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001257191](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001244120](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001244120.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_004397.6 |
NP_004388.2 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_004397.6](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_004388.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_004397](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_004388](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_004388.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 44751.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1452 nt): ATGAGCACGGCCAGAACAGAGAACCCTGTTATAATGGGTCTGTCCAGTCAAAATGGTCAGCTGAGAGGCC CTGTGAAACCCACTGGTGGCCCTGGAGGAGGGGGCACACAGACACAGCAACAGATGAACCAGCTGAAAAA CACCAACACAATCAATAATGGCACTCAGCAGCAAGCACAGAGTATGACCACCACTATTAAACCTGGTGAT GACTGGAAAAAGACTTTAAAACTCCCTCCAAAGGATCTAAGAATCAAAACTTCGGATGTGACCTCCACAA AAGGAAATGAGTTTGAAGATTACTGTTTGAAACGGGAGTTACTGATGGGAATTTTTGAAATGGGCTGGGA AAAGCCATCTCCTATTCAGGAGGAGAGCATTCCCATTGCTTTATCTGGTAGGGATATCTTAGCTAGAGCA AAAAATGGAACAGGCAAGAGCGGTGCCTACCTCATTCCCTTACTTGAACGGCTAGACCTGAAGAAGGACA ATATACAAGCAATGGTGATTGTTCCCACTAGAGAACTTGCTCTACAGGTCAGTCAAATTTGCATCCAGGT CAGCAAACACATGGGAGGGGCCAAAGTGATGGCAACCACAGGAGGAACCAATTTACGAGATGACATAATG AGGCTTGATGATACAGTGCACGTGGTGATTGCTACCCCTGGGAGAATCCTGGATCTTATTAAGAAAGGAG TAGCAAAGGTTGATCATGTCCAGATGATAGTATTGGATGAGGCAGATAAGTTGCTGTCACAGGATTTTGT GCAGATAATGGAGGATATTATTCTCACGCTACCTAAAAACAGGCAGATTTTACTATATTCCGCTACTTTC CCTCTTAGTGTACAGAAGTTCATGAATTCCCATTTGCAGAAACCCTATGAGATTAACCTGATGGAGGAAC TAACTCTGAAGGGAGTAACCCAGTACTACGCATATGTAACTGAGCGCCAAAAAGTACACTGCCTCAACAC ACTTTTCTCCAGGCTTCAGATAAACCAGTCGATCATTTTCTGTAACTCCTCTCAGCGAGTTGAATTGCTA GCCAAGAAGATTTCTCAACTGGGTTATTCTTGCTTCTATATTCATGCTAAAATGAGGCAGGAACATCGAA ATCGTGTATTTCATGATTTCCGAAATGGCTTATGCCGCAATCTTGTTTGCACTGATCTGTTTACCCGAGG TATTGATATACAAGCTGTGAATGTGGTAATAAACTTTGATTTCCCAAAGCTGGCAGAGACCTATCTCCAT CGTATTGGAAGATCAGGTCGCTTTGGTCATCTTGGCTTAGCCATCAACTTGATCACATATGATGATCGCT TCAACCTGAAAAGTATTGAGGAGCAGCTGGGAACAGAAATTAAACCTATTCCGAGCAACATTGATAAGAG CCTGTATGTGGCAGAATACCACAGCGAGCCTGTAGAAGATGAGAAACCTTAA
Translation (483 aa): MSTARTENPVIMGLSSQNGQLRGPVKPTGGPGGGGTQTQQQMNQLKNTNTINNGTQQQAQSMTTTIKPGD DWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARA KNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIM RLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATF PLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELL AKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLH RIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVEDEKP
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