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Report for CCDS44755.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44755.1 Public Homo sapiens 11 ROBO3 24 110 108 CCDS HistoryNCBI Gene:64221Re-query CCDS DB by CCDS ID:44755.1Re-query CCDS DB by GeneID:64221See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44755.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000397801.6 ENSP00000380903.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000397801.6Link to Ensembl Protein Viewer:ENSP00000380903.1Re-query CCDS DB by Nucleotide ID:ENST00000397801Re-query CCDS DB by Protein ID:ENSP00000380903
Original member Current member NCBI NM_022370.4 NP_071765.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022370.4Link to Protein Sequence:NP_071765.2Re-query CCDS DB by Nucleotide ID:NM_022370Re-query CCDS DB by Protein ID:NP_071765Link to BLAST:NP_071765.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_071765.2 1386 Q96MS0-1 1386 100% 0 0

Chromosomal Locations for CCDS 44755.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 124865578 124865737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124868802 124869128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124869450 124869607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124869948 124870068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124870165 124870303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124870601 124870728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124871014 124871138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124872381 124872552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124872884 124873089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124873310 124873391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124873697 124873862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124874070 124874236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124874788 124874909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124875111 124875336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124875564 124875685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124875954 124876125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124876275 124876460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124877161 124877184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124877267 124877309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124877519 124877658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124877937 124878131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124878298 124878436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124878584 124878796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124879190 124879341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124879465 124879575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124879787 124879948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124880418 124880608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124881239 124881250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4161 nt):
ATGCTGCGCTACCTGCTGAAAACGCTGCTGCAGATGAACTTGTTCGCGGACTCTCTGGCCGGGGACATCT
CCAACTCCAGCGAGCTGCTCTTGGGCTTCAACTCCTCGCTGGCGGCGCTCAACCACACCCTGCTGCCTCC
CGGCGATCCCTCTCTCAACGGGTCAAGGGTAGGACCGGAGGACGCTATGCCCCGCATCGTGGAGCAGCCG
CCAGATCTGCTGGTCTCCCGAGGCGAGCCCGCCACGTTGCCCTGCCGCGCTGAAGGCCGACCCCGACCCA
ACATTGAGTGGTACAAGAACGGGGCGCGTGTGGCCACTGTGCGGGAGGATCCGCGTGCGCACCGCCTGCT
GCTGCCCAGCGGCGCCCTCTTCTTCCCGCGCATCGTGCACGGGCGCCGCGCGCGGCCGGACGAAGGTGTC
TACACTTGCGTGGCTCGCAACTACCTGGGGGCAGCAGCGAGCAGAAACGCCTCGCTGGAAGTGGCAGTCC
TCCGTGATGATTTCCGGCAGTCTCCTGGAAACGTGGTGGTGGCAGTGGGGGAGCCAGCAGTACTGGAATG
CGTGCCCCCCCGCGGCCACCCGGAGCCTTCCGTGTCCTGGAGGAAGGACGGTGCAAGACTCAAGGAAGAG
GAAGGAAGGATCACGATCCGTGGAGGGAAGCTGATGATGTCACATACACTCAAGAGCGATGCAGGCATGT
ATGTGTGCGTAGCCTCCAACATGGCGGGAGAACGGGAGAGTGCGGCAGCTGAAGTCATGGTACTGGAGCG
TCCCTCATTCCTGCGCAGACCAGTGAATCAGGTGGTCCTGGCTGATGCCCCTGTGACTTTCCTATGTGAG
GTGAAGGGGGATCCCCCACCTCGTCTACGCTGGCGCAAGGAGGATGGGGAACTGCCCACAGGCAGGTATG
AGATCCGGAGTGACCACAGCCTTTGGATTGGGCATGTGAGTGCCGAAGATGAGGGAACGTACACCTGTGT
GGCGGAGAACAGTGTGGGCCGCGCTGAAGCATCTGGCTCCCTCAGTGTTCACGTCCCACCCCAGTTGGTG
ACCCAGCCCCAGGACCAGATGGCAGCTCCTGGAGAGAGCGTGGCTTTCCAGTGCGAGACCAAAGGAAACC
CCCCACCTGCCATCTTCTGGCAGAAGGAGGGGAGTCAGGTCCTGCTTTTCCCCAGTCAGTCACTTCAGCC
GACGGGGCGCTTCTCAGTGTCTCCAAGAGGCCAACTTAACATCACCGCGGTGCAGCGTGGGGATGCTGGG
TACTACGTGTGCCAGGCTGTCAGTGTGGCTGGCAGCATCCTGGCCAAGGCCCTGCTGGAGATAAAAGGAG
CCTCTTTGGATGGGCTGCCTCCTGTCATCCTCCAGGGACCAGCCAATCAGACGCTGGTGCTTGGCTCCTC
CGTGTGGCTGCCCTGCAGAGTGACTGGGAACCCTCAACCCAGTGTCCGATGGAAGAAGGATGGGCAGTGG
CTGCAGGGGGATGACCTCCAGTTCAAGACAATGGCCAACGGTACCCTGTACATCGCCAATGTGCAGGAGA
TGGACATGGGCTTCTACAGCTGCGTGGCCAAGAGTTCCACAGGGGAAGCCACATGGAGCGGCTGGCTTAA
GATGCGGGAAGACTGGGGAGTATCACCAGACCCCCCTACAGAACCCAGTTCCCCTCCGGGGGCTCCCTCT
CAGCCAGTGGTCACTGAGATCACCAAGAACAGCATTACCCTGACCTGGAAGCCCAACCCACAAACTGGGG
CTGCAGTCACGTCTTATGTGATAGAGGCCTTCAGCCCAGCAGCTGGCAACACATGGCGTACTGTGGCAGA
TGGCGTGCAGCTGGAGACACACACAGTCAGCGGTCTGCAGCCCAATACCATCTACCTGTTTCTGGTTCGA
GCAGTGGGAGCCTGGGGCCTCAGTGAGCCCAGCCCCGTCTCTGAGCCTGTCCGTACACAGGATAGCAGCC
CCTCTAGGCCAGTGGAGGACCCATGGAGAGGCCAGCAGGGACTGGCGGAAGTGGCTGTGCGCCTGCAGGA
GCCCATAGTCCTGGGACCCCGGACCCTGCAGGTGTCCTGGACTGTGGATGGCCCAGTCCAGCTGGTGCAA
GGTTTCCGGGTGTCTTGGAGGGTAGCAGGCCCTGAGGGAGGAAGCTGGACAATGTTGGACCTACAGTCCC
CAAGCCAGCAAAGTACTGTGCTAAGAGGACTCCCTCCAGGGACCCAAATCCAGATCAAGGTGCAAGCCCA
AGGCCAGGAGGGGCTGGGGGCTGAAAGCCTCTCTGTGACCAGGAGCATTCCTGAGGAGGCCCCCAGTGGC
CCCCCACAGGGAGTGGCGGTGGCCTTGGGGGGTGATGGCAACAGCAGTATCACTGTGTCCTGGGAACCTC
CACTCCCCTCCCAGCAAAATGGGGTCATCACGGAATACCAGATCTGGTGCCTGGGCAATGAGAGCCGCTT
TCACCTCAATCGATCTGCAGCAGGCTGGGCACGCTCCGCAATGCTCCGAGGACTGGTGCCCGGTCTCCTC
TATCGAACCCTGGTCGCGGCGGCCACCAGCGCAGGCGTGGGCGTGCCCAGTGCCCCAGTGCTGGTGCAGC
TGCCGTCCCCGCCGGACCTGGAGCCCGGGCTGGAGGTGGGCGCGGGGCTGGCGGTGCGGCTGGCGAGGGT
GCTGCGGGAGCCCGCCTTCCTCGCGGGCAGCGGCGCAGCCTGCGGGGCGCTGCTTCTCGGGCTCTGCGCC
GCCCTCTACTGGCGCCGGAAACAGCGCAAAGAGCTCAGCCACTACACGGCCTCTTTTGCCTACACACCGG
CAGTGTCCTTCCCGCACTCAGAGGGCCTCTCTGGAGCCAGTTCCAGGCCACCCATGGGCCTTGGCCCCGC
CCCCTACTCATGGCTGGCAGATTCGTGGCCCCACCCATCTCGAAGCCCCTCGGCCCAGGAACCCAGGGGA
AGCTGCTGCCCTAGCAATCCTGACCCGGACGACAGATATTACAACGAAGCGGGAATCTCCCTGTATCTAG
CTCAGACGGCCAGGGGCACGGCCGCCCCTGGCGAGGGTCCTGTCTATAGCACCATTGACCCAGCGGGGGA
GGAGCTGCAGACCTTCCATGGGGGCTTCCCCCAACATCCCTCAGGAGATCTGGGTCCCTGGAGCCAGTAC
GCTCCTCCAGAGTGGAGCCAGGGGGACAGTGGAGCCAAGGGAGGCAAAGTGAAGCTTCTGGGGAAACCTG
TGCAGATGCCCTCTCTGAACTGGCCAGAAGCCCTGCCCCCACCTCCTCCTTCTTGTGAACTGAGCTGCCT
AGAAGGGCCGGAGGAGGAGCTGGAGGGCAGCTCAGAGCCAGAGGAGTGGTGCCCGCCAATGCCTGAGAGA
AGTCACCTGACGGAGCCCAGCTCCAGTGGAGGGTGCCTGGTCACCCCATCCCGAAGGGAAACCCCCTCTC
CCACACCTTCCTATGGACAGCAGTCCACAGCCACTCTTACACCCTCACCTCCTGACCCTCCCCAGCCCCC
AACTGACATGCCCCATCTCCATCAGATGCCCAGGAGGGTGCCCCTTGGGCCGAGTTCCCCTCTCAGTGTA
TCCCAGCCCATGCTGGGCATCCGTGAAGCGAGGCCTGCTGGCTTGGGTGCTGGCCCTGCAGCCTCACCCC
ACCTCAGCCCCAGTCCTGCCCCTAGCACAGCCAGCAGTGCCCCAGGCAGAACCTGGCAGGGGAATGGGGA
GATGACTCCCCCACTTCAAGGACCCCGTGCTCGATTCCGGAAGAAACCCAAGGCTCTTCCCTACAGGAGG
GAGAACAGTCCTGGGGACTTGCCCCCACCACCCTTGCCACCGCCAGAGGAAGAGGCGAGCTGGGCCCTAG
AGCTGAGGGCAGCAGGCAGCATGTCCTCCCTGGAGCGGGAGCGCAGTGGGGAGAGGAAAGCGGTCCAGGC
CGTGCCCCTGGCAGCCCAGCGGGTGCTCCACCCAGATGAAGAGGCCTGGCTCCCATACAGCAGACCAAGC
TTCCTGTCCCGGGGCCAGGGCACCAGCACATGTTCCACGGCCGGCAGCAACTCTTCCAGGGGCTCCAGCA
GCTCTAGGGGCTCCCGGGGCCCTGGCCGGAGCCGGAGTCGGAGTCAGAGCCGGAGCCAGAGCCAAAGGCC
AGGACAGAAACGCCGAGAGGAACCAAGATGA

Translation (1386 aa):
MLRYLLKTLLQMNLFADSLAGDISNSSELLLGFNSSLAALNHTLLPPGDPSLNGSRVGPEDAMPRIVEQP
PDLLVSRGEPATLPCRAEGRPRPNIEWYKNGARVATVREDPRAHRLLLPSGALFFPRIVHGRRARPDEGV
YTCVARNYLGAAASRNASLEVAVLRDDFRQSPGNVVVAVGEPAVLECVPPRGHPEPSVSWRKDGARLKEE
EGRITIRGGKLMMSHTLKSDAGMYVCVASNMAGERESAAAEVMVLERPSFLRRPVNQVVLADAPVTFLCE
VKGDPPPRLRWRKEDGELPTGRYEIRSDHSLWIGHVSAEDEGTYTCVAENSVGRAEASGSLSVHVPPQLV
TQPQDQMAAPGESVAFQCETKGNPPPAIFWQKEGSQVLLFPSQSLQPTGRFSVSPRGQLNITAVQRGDAG
YYVCQAVSVAGSILAKALLEIKGASLDGLPPVILQGPANQTLVLGSSVWLPCRVTGNPQPSVRWKKDGQW
LQGDDLQFKTMANGTLYIANVQEMDMGFYSCVAKSSTGEATWSGWLKMREDWGVSPDPPTEPSSPPGAPS
QPVVTEITKNSITLTWKPNPQTGAAVTSYVIEAFSPAAGNTWRTVADGVQLETHTVSGLQPNTIYLFLVR
AVGAWGLSEPSPVSEPVRTQDSSPSRPVEDPWRGQQGLAEVAVRLQEPIVLGPRTLQVSWTVDGPVQLVQ
GFRVSWRVAGPEGGSWTMLDLQSPSQQSTVLRGLPPGTQIQIKVQAQGQEGLGAESLSVTRSIPEEAPSG
PPQGVAVALGGDGNSSITVSWEPPLPSQQNGVITEYQIWCLGNESRFHLNRSAAGWARSAMLRGLVPGLL
YRTLVAAATSAGVGVPSAPVLVQLPSPPDLEPGLEVGAGLAVRLARVLREPAFLAGSGAACGALLLGLCA
ALYWRRKQRKELSHYTASFAYTPAVSFPHSEGLSGASSRPPMGLGPAPYSWLADSWPHPSRSPSAQEPRG
SCCPSNPDPDDRYYNEAGISLYLAQTARGTAAPGEGPVYSTIDPAGEELQTFHGGFPQHPSGDLGPWSQY
APPEWSQGDSGAKGGKVKLLGKPVQMPSLNWPEALPPPPPSCELSCLEGPEEELEGSSEPEEWCPPMPER
SHLTEPSSSGGCLVTPSRRETPSPTPSYGQQSTATLTPSPPDPPQPPTDMPHLHQMPRRVPLGPSSPLSV
SQPMLGIREARPAGLGAGPAASPHLSPSPAPSTASSAPGRTWQGNGEMTPPLQGPRARFRKKPKALPYRR
ENSPGDLPPPPLPPPEEEASWALELRAAGSMSSLERERSGERKAVQAVPLAAQRVLHPDEEAWLPYSRPS
FLSRGQGTSTCSTAGSNSSRGSSSSRGSRGPGRSRSRSQSRSQSQRPGQKRREEPR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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