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Report for CCDS44817.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44817.1 Public Homo sapiens 12 ZNF384 24 110 108 CCDS HistoryNCBI Gene:171017Re-query CCDS DB by CCDS ID:44817.1Re-query CCDS DB by GeneID:171017See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 44817.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361959.7 ENSP00000354592.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000361959.7Link to Ensembl Protein Viewer:ENSP00000354592.3Re-query CCDS DB by Nucleotide ID:ENST00000361959Re-query CCDS DB by Protein ID:ENSP00000354592
Original member Current member EBI ENST00000396801.7 ENSP00000380019.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396801.7Link to Ensembl Protein Viewer:ENSP00000380019.3Re-query CCDS DB by Nucleotide ID:ENST00000396801Re-query CCDS DB by Protein ID:ENSP00000380019
Original member Current member NCBI NM_001135734.3 NP_001129206.1 Accepted alive Link to Nucleotide Sequence:NM_001135734.3Link to Protein Sequence:NP_001129206.1Re-query CCDS DB by Nucleotide ID:NM_001135734Re-query CCDS DB by Protein ID:NP_001129206Link to BLAST:NP_001129206.1
Original member Current member NCBI NM_001385750.1 NP_001372679.1 Accepted alive Link to Nucleotide Sequence:NM_001385750.1Link to Protein Sequence:NP_001372679.1Re-query CCDS DB by Nucleotide ID:NM_001385750Re-query CCDS DB by Protein ID:NP_001372679Link to BLAST:NP_001372679.1
Original member Current member NCBI NM_001385751.1 NP_001372680.1 Accepted alive Link to Nucleotide Sequence:NM_001385751.1Link to Protein Sequence:NP_001372680.1Re-query CCDS DB by Nucleotide ID:NM_001385751Re-query CCDS DB by Protein ID:NP_001372680Link to BLAST:NP_001372680.1
Original member Current member NCBI NM_001385752.1 NP_001372681.1 Accepted alive Link to Nucleotide Sequence:NM_001385752.1Link to Protein Sequence:NP_001372681.1Re-query CCDS DB by Nucleotide ID:NM_001385752Re-query CCDS DB by Protein ID:NP_001372681Link to BLAST:NP_001372681.1
Original member Current member NCBI NM_001385753.1 NP_001372682.1 Accepted alive Link to Nucleotide Sequence:NM_001385753.1Link to Protein Sequence:NP_001372682.1Re-query CCDS DB by Nucleotide ID:NM_001385753Re-query CCDS DB by Protein ID:NP_001372682Link to BLAST:NP_001372682.1
Original member Current member NCBI NM_001385754.1 NP_001372683.1 Accepted alive Link to Nucleotide Sequence:NM_001385754.1Link to Protein Sequence:NP_001372683.1Re-query CCDS DB by Nucleotide ID:NM_001385754Re-query CCDS DB by Protein ID:NP_001372683Link to BLAST:NP_001372683.1
Original member Current member NCBI NM_001385755.1 NP_001372684.1 Accepted alive Link to Nucleotide Sequence:NM_001385755.1Link to Protein Sequence:NP_001372684.1Re-query CCDS DB by Nucleotide ID:NM_001385755Re-query CCDS DB by Protein ID:NP_001372684Link to BLAST:NP_001372684.1
Original member Current member NCBI NM_001385756.1 NP_001372685.1 Accepted alive Link to Nucleotide Sequence:NM_001385756.1Link to Protein Sequence:NP_001372685.1Re-query CCDS DB by Nucleotide ID:NM_001385756Re-query CCDS DB by Protein ID:NP_001372685Link to BLAST:NP_001372685.1
Original member Current member NCBI NM_001385757.1 NP_001372686.1 Accepted alive Link to Nucleotide Sequence:NM_001385757.1Link to Protein Sequence:NP_001372686.1Re-query CCDS DB by Nucleotide ID:NM_001385757Re-query CCDS DB by Protein ID:NP_001372686Link to BLAST:NP_001372686.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001129206.1 577 Q8TF68-1 577 100% 0 0
NP_001372679.1 577 Q8TF68-1 577 100% 0 0
NP_001372680.1 577 Q8TF68-1 577 100% 0 0
NP_001372681.1 577 Q8TF68-1 577 100% 0 0
NP_001372682.1 577 Q8TF68-1 577 100% 0 0
NP_001372683.1 577 Q8TF68-1 577 100% 0 0
NP_001372684.1 577 Q8TF68-1 577 100% 0 0
NP_001372685.1 577 Q8TF68-1 577 100% 0 0
NP_001372686.1 577 Q8TF68-1 577 100% 0 0

Chromosomal Locations for CCDS 44817.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 6667714 6668115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 6669031 6669189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 6670760 6670838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 6672350 6672532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 6673216 6673440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 6678127 6678460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 6678663 6678710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 6678946 6679183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 6679455 6679520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1734 nt):
ATGGAAGAATCTCACTTCAATTCTAACCCGTACTTCTGGCCTTCTATCCCCACAGTCTCAGGTCAGATCG
AGAACACAATGTTCATCAACAAGATGAAGGATCAGCTGTTGCCAGAGAAGGGCTGTGGTCTGGCCCCACC
TCACTACCCCACCTTGCTGACAGTGCCTGCCTCAGTGTCCCTGCCCTCAGGCATCAGTATGGACACAGAG
TCCAAGTCAGACCAGCTGACCCCACACAGCCAAGCGTCCGTTACCCAGAATATCACGGTGGTCCCTGTGC
CGTCTACAGGACTGATGACTGCTGGAGTCTCCTGTTCTCAGAGGTGGAGAAGAGAAGGGAGTCAATCAAG
GGGTCCGGGTTTGGTAATCACGTCCCCCTCAGGCTCTCTTGTGACCACAGCATCATCAGCTCAGACCTTC
CCCATTTCGGCTCCCATGATTGTCTCAGCTCTTCCCCCTGGCTCACAAGCCCTGCAGGTTGTCCCTGACC
TCTCCAAGAAGGTAGCATCGACCCTAACCGAGGAAGGAGGCGGAGGTGGTGGTGGAGGTGGCAGTGTGGC
TCCTAAGCCACCCCGGGGCCGGAAGAAGAAGCGGATGCTGGAATCAGGGCTGCCCGAGATGAATGACCCT
TATGTCCTCTCCCCTGAGGATGATGATGACCATCAGAAAGACGGCAAGACCTACAGGTGCCGGATGTGCT
CACTGACATTCTACTCCAAGTCGGAGATGCAGATCCACTCCAAGTCACACACCGAGACCAAGCCCCACAA
GTGCCCACATTGCTCCAAGACCTTCGCCAACAGCTCCTACCTGGCCCAGCACATCCGTATACACTCAGGG
GCTAAGCCCTACAGTTGTAACTTCTGTGAGAAATCCTTCCGCCAGCTCTCCCACCTTCAGCAGCACACCC
GGATCCACTCCAAGATGCACACGGAGACCATCAAGCCCCACAAGTGCCCGCACTGCTCCAAGACCTTCGC
CAACACCTCCTACCTGGCCCAGCACCTCCGTATCCACTCGGGGGCCAAGCCCTACAACTGTTCCTACTGC
CAGAAGGCCTTCCGCCAGCTCTCCCACCTCCAGCAGCACACACGAATCCACACTGGTGATAGACCATACA
AATGTGCACACCCAGGCTGTGAGAAAGCCTTCACACAACTCTCCAATCTGCAGTCCCACAGACGGCAACA
CAACAAAGATAAACCCTTCAAGTGCCACAACTGTCATCGGGCGTACACGGATGCAGCCTCACTAGAGGTG
CACCTGTCTACGCACACAGTGAAGCATGCCAAGGTGTACACCTGCACTATCTGCAGTCGGGCATACACAT
CAGAAACATACCTTATGAAACATATGCGCAAACACAACCCGCCTGATCTTCAGCAACAGGTGCAGGCAGC
AGCAGCAGCGGCAGCAGTGGCCCAGGCCCAGGCTCAAGCTCAAGCCCAGGCTCAGGCTCAGGCTCAAGCC
CAGGCCCAGGCCCAGGCCTCCCAGGCATCACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAACAGCCACCACCACACTTCCAGTCTCCTGGGGCAGCCCCCCAGGGTGGGGGTGGTGGGGACAGCAA
TCCCAACCCTCCACCCCAGTGTTCCTTTGACCTGACCCCGTATAAGACGGCGGAGCATCATAAGGACATC
TGCCTCACTGTCACCACCAGCACCATCCAGGTGGAGCACCTGGCCAGCTCTTAG

Translation (577 aa):
MEESHFNSNPYFWPSIPTVSGQIENTMFINKMKDQLLPEKGCGLAPPHYPTLLTVPASVSLPSGISMDTE
SKSDQLTPHSQASVTQNITVVPVPSTGLMTAGVSCSQRWRREGSQSRGPGLVITSPSGSLVTTASSAQTF
PISAPMIVSALPPGSQALQVVPDLSKKVASTLTEEGGGGGGGGGSVAPKPPRGRKKKRMLESGLPEMNDP
YVLSPEDDDDHQKDGKTYRCRMCSLTFYSKSEMQIHSKSHTETKPHKCPHCSKTFANSSYLAQHIRIHSG
AKPYSCNFCEKSFRQLSHLQQHTRIHSKMHTETIKPHKCPHCSKTFANTSYLAQHLRIHSGAKPYNCSYC
QKAFRQLSHLQQHTRIHTGDRPYKCAHPGCEKAFTQLSNLQSHRRQHNKDKPFKCHNCHRAYTDAASLEV
HLSTHTVKHAKVYTCTICSRAYTSETYLMKHMRKHNPPDLQQQVQAAAAAAAVAQAQAQAQAQAQAQAQA
QAQAQASQASQQQQQQQQQQQQQQQQPPPHFQSPGAAPQGGGGGDSNPNPPPQCSFDLTPYKTAEHHKDI
CLTVTTSTIQVEHLASS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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