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Report for CCDS44989.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44989.1 Public Homo sapiens 12 FBXO21 24 110 108 CCDS HistoryNCBI Gene:23014Re-query CCDS DB by CCDS ID:44989.1Re-query CCDS DB by GeneID:23014See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44989.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000622495.5 ENSP00000483508.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000622495.5Link to Ensembl Protein Viewer:ENSP00000483508.1Re-query CCDS DB by Nucleotide ID:ENST00000622495Re-query CCDS DB by Protein ID:ENSP00000483508
Original member Current member NCBI NM_015002.3 NP_055817.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015002.3Link to Protein Sequence:NP_055817.1Re-query CCDS DB by Nucleotide ID:NM_015002Re-query CCDS DB by Protein ID:NP_055817Link to BLAST:NP_055817.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055817.1 621 O94952-1 621 100% 0 0

Chromosomal Locations for CCDS 44989.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 117146087 117146277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 117155791 117155948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 117157873 117158063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 117165485 117165617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 117166898 117167077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 117172471 117172607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 117174205 117174341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 117174651 117174797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 117177520 117177641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 117186477 117186571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 117189227 117189362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 117190218 117190456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1866 nt):
ATGGCGGCGGCAGCAGTCGACAGCGCGATGGAGGTGGTGCCGGCGCTGGCGGAGGAGGCCGCGCCGGAGG
TAGCGGGCCTCAGCTGCCTCGTCAACCTGCCGGGTGAGGTGCTGGAGTACATCCTGTGCTGCGGCTCGCT
GACGGCCGCCGACATCGGCCGTGTCTCCAGCACCTGCCGGCGGCTGCGCGAGCTGTGCCAGAGCAGCGGG
AAGGTGTGGAAGGAGCAGTTCCGGGTGAGGTGGCCTTCCCTTATGAAACACTACAGCCCCACCGACTACG
TCAATTGGTTGGAAGAGTATAAAGTTCGGCAAAAAGCTGGGTTAGAAGCGCGGAAGATTGTAGCCTCGTT
CTCAAAGAGGTTCTTTTCAGAGCACGTTCCTTGTAATGGCTTCAGTGACATTGAGAACCTTGAAGGACCA
GAGATTTTTTTTGAGGATGAACTGGTGTGTATCCTAAATATGGAAGGAAGAAAAGCTTTGACCTGGAAAT
ACTACGCAAAAAAAATTCTTTACTACCTGCGGCAACAGAAGATCTTAAATAATCTTAAGGCCTTTCTTCA
GCAGCCAGATGACTATGAGTCGTATCTTGAAGGTGCTGTATATATTGACCAGTACTGCAATCCTCTCTCC
GACATCAGCCTCAAAGACATCCAGGCCCAAATTGACAGCATCGTGGAGCTTGTTTGCAAAACCCTTCGGG
GCATAAACAGTCGCCACCCCAGCTTGGCCTTCAAGGCAGGTGAATCATCCATGATAATGGAAATAGAACT
CCAGAGCCAGGTGCTGGATGCCATGAACTATGTCCTTTACGACCAACTGAAGTTCAAGGGGAATCGAATG
GATTACTATAATGCCCTCAACTTATATATGCATCAGGTTTTGATTCGCAGAACAGGAATCCCAATCAGCA
TGTCTCTGCTCTATTTGACAATTGCTCGGCAGTTGGGAGTCCCACTGGAGCCTGTCAACTTCCCAAGTCA
CTTCTTATTAAGGTGGTGCCAAGGCGCAGAAGGGGCGACCCTGGACATCTTTGACTACATCTACATAGAT
GCTTTTGGGAAAGGCAAGCAGCTGACAGTGAAAGAATGCGAGTACTTGATCGGCCAGCACGTGACTGCAG
CACTGTATGGGGTGGTCAATGTCAAGAAGGTGTTACAGAGAATGGTGGGAAACCTGTTAAGCCTGGGGAA
GCGGGAAGGCATCGACCAGTCATACCAGCTCCTGAGAGACTCGCTGGATCTCTATCTGGCAATGTACCCG
GACCAGGTGCAGCTTCTCCTCCTCCAAGCCAGGCTTTACTTCCACCTGGGAATCTGGCCAGAGAAGGTGC
TTGACATCCTCCAGCACATCCAAACCCTAGACCCGGGGCAGCACGGGGCGGTGGGCTACCTGGTGCAGCA
CACTCTAGAGCACATTGAGCGCAAAAAGGAGGAGGTGGGCGTAGAGGTGAAGCTGCGCTCCGATGAGAAG
CACAGAGATGTCTGCTACTCCATCGGGCTCATTATGAAGCATAAGAGGTATGGCTATAACTGTGTGATCT
ACGGCTGGGACCCCACCTGCATGATGGGACACGAGTGGATCCGGAACATGAACGTCCACAGCCTGCCGCA
CGGCCACCACCAGCCTTTCTATAACGTGCTGGTGGAGGACGGCTCCTGTCGATACGCAGCCCAAGAAAAC
TTGGAATATAACGTGGAGCCTCAAGAAATCTCACACCCTGACGTGGGACGCTATTTCTCAGAGTTTACTG
GCACTCACTACATCCCAAACGCAGAGCTGGAGATCCGGTATCCAGAAGATCTGGAGTTTGTCTATGAAAC
GGTGCAGAATATTTACAGTGCAAAGAAAGAGAACATAGATGAGTAA

Translation (621 aa):
MAAAAVDSAMEVVPALAEEAAPEVAGLSCLVNLPGEVLEYILCCGSLTAADIGRVSSTCRRLRELCQSSG
KVWKEQFRVRWPSLMKHYSPTDYVNWLEEYKVRQKAGLEARKIVASFSKRFFSEHVPCNGFSDIENLEGP
EIFFEDELVCILNMEGRKALTWKYYAKKILYYLRQQKILNNLKAFLQQPDDYESYLEGAVYIDQYCNPLS
DISLKDIQAQIDSIVELVCKTLRGINSRHPSLAFKAGESSMIMEIELQSQVLDAMNYVLYDQLKFKGNRM
DYYNALNLYMHQVLIRRTGIPISMSLLYLTIARQLGVPLEPVNFPSHFLLRWCQGAEGATLDIFDYIYID
AFGKGKQLTVKECEYLIGQHVTAALYGVVNVKKVLQRMVGNLLSLGKREGIDQSYQLLRDSLDLYLAMYP
DQVQLLLLQARLYFHLGIWPEKVLDILQHIQTLDPGQHGAVGYLVQHTLEHIERKKEEVGVEVKLRSDEK
HRDVCYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGSCRYAAQEN
LEYNVEPQEISHPDVGRYFSEFTGTHYIPNAELEIRYPEDLEFVYETVQNIYSAKKENIDE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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