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Report for CCDS45116.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45116.1 Public Homo sapiens 14 JKAMP 24 110 108 CCDS HistoryNCBI Gene:51528Re-query CCDS DB by CCDS ID:45116.1Re-query CCDS DB by GeneID:51528See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45116.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000616435.5 ENSP00000479775.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000616435.5Link to Ensembl Protein Viewer:ENSP00000479775.2Re-query CCDS DB by Nucleotide ID:ENST00000616435Re-query CCDS DB by Protein ID:ENSP00000479775
Original member Current member NCBI NM_016475.5 NP_057559.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016475.5Link to Protein Sequence:NP_057559.2Re-query CCDS DB by Nucleotide ID:NM_016475Re-query CCDS DB by Protein ID:NP_057559Link to BLAST:NP_057559.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057559.2 311 Q9P055-4 311 100% 0 0

Chromosomal Locations for CCDS 45116.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 59484590 59484593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 59486713 59486804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 59487674 59487828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 59495018 59495224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 59498727 59498908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 59501191 59501267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 59503854 59504072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (936 nt):
ATGGCTGTCGATATTCAACCAGCATGCCTTGGACTTTATTGTGGGAAGACCCTATTATTTAAAAATGGCT
CAACTGAAATATATGGAGAATGTGGGGTATGCCCAAGAGGACAGAGAACGAATGCACAGAAATATTGTCA
GCCTTGCACAGAATCTCCTGAACTTTATGATTGGCTCTATCTTGGATTTATGGCAATGCTTCCTCTGGTT
TTACATTGGTTCTTCATTGAATGGTACTCGGGGAAAAAGAGTTCCAGCGCACTTTTCCAACACATCACTG
CATTATTTGAATGCAGCATGGCAGCTATTATCACCTTACTTGTGAGTGATCCAGTTGGTGTTCTTTATAT
TCGTTCATGTCGAGTATTGATGCTTTCTGACTGGTACACGATGCTTTACAACCCAAGTCCAGATTACGTT
ACCACAGTACACTGTACTCATGAAGCCGTCTACCCACTATATACCATTGTATTTATCTATTACGCATTCT
GCTTGGTATTAATGATGCTGCTCCGACCTCTTCTGGTGAAGAAGATTGCATGTGGGTTAGGGAAATCTGA
TCGATTTAAAAGTATTTATGCTGCACTTTACTTCTTCCCAATTTTAACCGTGCTTCAGGCAGTTGGTGGA
GGCCTTTTATATTACGCCTTCCCATACATTATATTAGTGTTATCTTTGGTTACTCTGGCTGTGTACATGT
CTGCTTCTGAAATAGAGAACTGCTATGATCTTCTGGTCAGAAAGAAAAGACTTATTGTTCTCTTCAGCCA
CTGGTTACTTCATGCCTATGGAATAATCTCCATTTCCAGAGTGGATAAACTTGAGCAAGATTTGCCCCTT
TTGGCTTTGGTACCTACACCAGCCCTTTTTTACTTGTTCACTGCAAAATTTACCGAACCTTCAAGGATAC
TCTCAGAAGGAGCCAATGGACACTGA

Translation (311 aa):
MAVDIQPACLGLYCGKTLLFKNGSTEIYGECGVCPRGQRTNAQKYCQPCTESPELYDWLYLGFMAMLPLV
LHWFFIEWYSGKKSSSALFQHITALFECSMAAIITLLVSDPVGVLYIRSCRVLMLSDWYTMLYNPSPDYV
TTVHCTHEAVYPLYTIVFIYYAFCLVLMMLLRPLLVKKIACGLGKSDRFKSIYAALYFFPILTVLQAVGG
GLLYYAFPYIILVLSLVTLAVYMSASEIENCYDLLVRKKRLIVLFSHWLLHAYGIISISRVDKLEQDLPL
LALVPTPALFYLFTAKFTEPSRILSEGANGH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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