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Report for CCDS45174.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
45174.1 |
Public |
Homo sapiens |
14 |
ZBTB42 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:100128927](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:45174.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:100128927](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 14 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 45174.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000342537.8 |
ENSP00000409107.2 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000342537.8](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000409107.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000342537](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000409107](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000555360.1 |
ENSP00000450673.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000555360.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000450673.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000555360](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000450673](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001137601.3 |
NP_001131073.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001137601.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001131073.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001137601](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001131073](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001131073.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001370342.1 |
NP_001357271.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001370342.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001357271.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001370342](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001357271](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001357271.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 45174.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1269 nt): ATGGAGTTCCCTGAGCACGGCGGACGGCTGCTGGGCCGCCTGAGACAGCAGCGCGAGCTGGGCTTCCTAT GCGACTGCACCGTGCTGGTGGGCGACGCGCGCTTCCCGGCCCACCGTGCCGTGCTGGCCGCGTGCAGCGT CTACTTCCATCTCTTCTACAGGGACCGGCCCGCGGGCAGTCGCGACACGGTGCGGCTCAACGGCGACATC GTCACGGCGCCCGCCTTCGGCCGCCTACTGGACTTCATGTACGAGGGCCGCCTGGACCTGCGCAGCCTGC CTGTGGAGGACGTCCTGGCAGCCGCCAGCTACCTGCACATGTATGACATCGTCAAGGTCTGCAAGGGCAG GCTCCAGGAGAAGGATCGAAGTCTGGACCCGGGGAACCCTGCCCCTGGGGCAGAACCTGCTCAGCCACCG TGCCCCTGGCCTGTCTGGACCGCGGACCTCTGCCCAGCTGCCCGAAAGGCCAAGCTCCCCCCGTTTGGGG TCAAGGCTGCCCTCCCTCCTCGAGCATCTGGGCCTCCTCCCTGCCAGGTCCCAGAAGAGTCAGACCAGGC CCTGGACCTGTCGTTGAAGTCTGGCCCAAGGCAGGAGCGGGTCCACCCACCGTGCGTCCTCCAGACACCC CTCTGCAGCCAGAGGCAGCCAGGGGCCCAGCCACTGGTGAAGGACGAACGGGACTCACTGTCCGAACAGG AGGAGAGCAGCAGCTCTAGGAGCCCCCACAGTCCCCCGAAGCCACCTCCTGTTCCTGCAGCCAAGGGCCT GGTGGTGGGCTTGCAGCCGCTGCCCCTCAGCGGAGAGGGCAGCCGGGAGCTGGAGCTTGGTGCAGGGCGA CTGGCGAGTGAGGACGAGCTGGGGCCTGGTGGGCCCCTCTGCATCTGCCCGTTGTGCAGCAAGCTGTTTC CCAGCTCCCACGTGCTGCAGCTGCACCTCAGTGCCCACTTCCGTGAGCGAGACAGCACCCGGGCCCGGCT CTCACCCGACGGCGTGGCACCCACCTGCCCGCTCTGTGGGAAGACCTTCTCGTGCACATACACACTGAAG AGGCACGAGCGGACACACTCGGGTGAGAAGCCCTATACGTGTGTGCAGTGTGGCAAAAGTTTTCAGTACT CCCACAACCTGAGCCGGCACACCGTAGTGCACACTCGAGAGAAGCCGCATGCCTGCCGGTGGTGTGAGCG CCGTTTCACGCAGTCCGGGGACCTCTACCGCCACGTCCGCAAGTTTCACTGTGGCCTCGTCAAGTCCCTT CTGGTGTGA
Translation (422 aa): MEFPEHGGRLLGRLRQQRELGFLCDCTVLVGDARFPAHRAVLAACSVYFHLFYRDRPAGSRDTVRLNGDI VTAPAFGRLLDFMYEGRLDLRSLPVEDVLAAASYLHMYDIVKVCKGRLQEKDRSLDPGNPAPGAEPAQPP CPWPVWTADLCPAARKAKLPPFGVKAALPPRASGPPPCQVPEESDQALDLSLKSGPRQERVHPPCVLQTP LCSQRQPGAQPLVKDERDSLSEQEESSSSRSPHSPPKPPPVPAAKGLVVGLQPLPLSGEGSRELELGAGR LASEDELGPGGPLCICPLCSKLFPSSHVLQLHLSAHFRERDSTRARLSPDGVAPTCPLCGKTFSCTYTLK RHERTHSGEKPYTCVQCGKSFQYSHNLSRHTVVHTREKPHACRWCERRFTQSGDLYRHVRKFHCGLVKSL LV
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