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Report for CCDS45184.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45184.1 Public Homo sapiens 15 GOLGA6L6 24 110 108 CCDS HistoryNCBI Gene:727832Re-query CCDS DB by CCDS ID:45184.1Re-query CCDS DB by GeneID:727832See the combined annotation on chromosome 15 in Sequence Viewer

Public Note for CCDS 45184.1
The coding region has been updated to correct several errors that were present versus the GRCh38 reference genome assembly.

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 45184.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000619213.1 ENSP00000480376.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000619213.1Link to Ensembl Protein Viewer:ENSP00000480376.1Re-query CCDS DB by Nucleotide ID:ENST00000619213Re-query CCDS DB by Protein ID:ENSP00000480376
Original member Current member NCBI NM_001145004.2 NP_001138476.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001145004.2Link to Protein Sequence:NP_001138476.2Re-query CCDS DB by Nucleotide ID:NM_001145004Re-query CCDS DB by Protein ID:NP_001138476Link to BLAST:NP_001138476.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138476.2 724 A8MZA4 724 100% 0 0

Chromosomal Locations for CCDS 45184.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 20534259 20535689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 20536342 20536483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 20536814 20536872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 20538252 20538358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 20538454 20538547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 20538636 20538686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 20539773 20539901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 20541548 20541709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2175 nt):
ATGCTGATGTGGCCCCAACCCCACCTCCCTACCCATCCCCACCTCCCTACCCATCCCCACCTCCCTACCC
ATCCCCACCTCCCTACCCATCCCCACCTCCCTACCCATCCTATGATGTCCAAAGAAACCAGACAGAGCAA
ATTGGCCGAGGCCAAGGAACAGTTGACAGACCATCATCCCCAGACCAACCCTAGTGTTGGTACAGCAGCA
AGCGACACCAAAAAGAAGAAAATAAATAATGGCACTAACCCTGAGACAACCACTTCTGGTGGTTGCCACT
CGCCTGAGGATGAACAGAAGGCAAGCCATCAACATCAGGAAGCCCTAAGGAGGGAGCTAGAGGCCCAGGT
TCATACCATACGAATCCTTACATGTCAGAAAACTGAGCTTCAGATGGCACTCTACTACAGCCAGCATGCT
GTCAAGCAGTTGGAAGGAGAGGCCAGGGATCTGATCAGCCGCCTGCATGATTCATGGAAGTTTGCAGGAG
AGTTAGAGCAGGCTCTCTCTGCTGTCGCTACACAGAAGAAGAAGGCAGATAGGTACATTGAGGAGTTAAC
AAAGGAGAGGGACGCCCTGAGTCTGGAACTGTACAGGAACACGATAACTGATGAGGAGCTGAAGGAGAAA
AATGCCGAACTACAAGAAAAACTTCAACTTGTAGAATCTGAAAAGTCTGAGATCCAGCTCAACGTAAAGG
AGCTAAAAAGGAAACTGGAGAGGGCCAAGCTCCTGCTGCCACAGCAGCAGCTGCAGGCGGAGGCTGACCA
CCTGGGTAAGGAGCTGCAGAGTGTGTCAGCAAAGCTCCAAGCCCAGGTGGAAGAGAACGAGTTGTGGAAC
CGCCTGAACCAGCAACAGGAGGAGAAGATGTGGAGGCAGGAGGAGAAGATACAGGAGTGGGAGGAGAAGA
TACAGGAGCAGGAGGAGAAGATACGGGAGCAGGAGGAGAAGATACGGGAGCAGGAGGAGAAGATGCGGAG
GCAGGAGGAGATGATGTGGGAGAAGGAGGAGAAGATGCGGAGGCAGGAGGAGATGATGTGGGAGAAGGAG
GAGAAGATGCGGAGGCAGGAGGAGATGATGTGGGAGAAGGAGGAGAAGATACGGGAGCTGGAAGAGAAGA
TGCACGAGCAGGAGAAGATACGGGAGCAGGAAGAGAAGAGGCAGGAGGAGGAGAAGATACGCGAGCAGGA
GAAGAGGCAGGAGCAGGAGGCGAAGATGTGGAGGCAGGAGGAGAAGATACGGGAGCAGGAAGAGAAGATA
CGGGAGCAGGAGAAAAAGATGTGGAGGCAGGAGGAGAAGATTCATGAGCAGGAGAAGATACGGGAGGAGG
AGAAGAGGCAGGAGCAGGAGGAGATGTGGAGGCAGGAGGAGAAGATAAGGGAGCAGGAGGAGATATGGAG
GCAAAAGGAGAAGATGCACGAGCAGGAGGAGAAGATACGGAAGCAGGAGGAGAAGGTGTGGAGGCAGGAG
GAGAAGATACGGGAGCAGGAGGAGAAGATACGGGAGCAGGAGGAGAAGATGTGGAGGCAGGAGGAGAAGA
TACGGGAGCAGGAGGAGATGTGGAGGGAGGAAGAGAAGATGCATGAGCAGGAGAAGATATGGGAGGAGGA
GAAGAGGCAGGAGCAGGAGGATAAGATGTGGAGGCAGGAGGAGAAGATACGGGAGCAGGAGGAGAAGGTG
TGGAGGCAGGAGGAGAAGATACGGGAGCAGGAGGAAAAGAGGCAGGAGCAGGAGGAGAAGATGTGGAAGC
AGGAGGAGAAGATAAGGGAGCAGGAGGAGAAGATACGGGAGCAGGAGGAGAAGATACGGGAGCAGGAGGA
GAAGATACGAGAGCAGGAGGAGATGACGCAGGAACAGGAAGAGAAGATGGGGGAGCAGGAGGAGAAGATG
TGTGAGCAGGAAGAGAAGATGCAAGAACAGGAGGAGACGATGTGGAGGCAGGAGGAGAAGATAAGGGAGC
AGGAGAAGAAGATACGGGAGCAGGAGGAGAAGATACGAGAGCAGGAGGAGATGATGCAGGAACAGGAAGA
GAAGATGTGGGAGCAGGAGGAGAAGATGTGTGAGCAGGAAGAGAAGATGCAAGAACAGGAGGAGAAGATG
CGGAGGCAGGAGGAGAAGATGTGGGAGCAGGAAGTGAGGCTGCGGCAGCAGGAGGAGAAGATGCAGGAAC
ACTAG

Translation (724 aa):
MLMWPQPHLPTHPHLPTHPHLPTHPHLPTHPHLPTHPMMSKETRQSKLAEAKEQLTDHHPQTNPSVGTAA
SDTKKKKINNGTNPETTTSGGCHSPEDEQKASHQHQEALRRELEAQVHTIRILTCQKTELQMALYYSQHA
VKQLEGEARDLISRLHDSWKFAGELEQALSAVATQKKKADRYIEELTKERDALSLELYRNTITDEELKEK
NAELQEKLQLVESEKSEIQLNVKELKRKLERAKLLLPQQQLQAEADHLGKELQSVSAKLQAQVEENELWN
RLNQQQEEKMWRQEEKIQEWEEKIQEQEEKIREQEEKIREQEEKMRRQEEMMWEKEEKMRRQEEMMWEKE
EKMRRQEEMMWEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEKI
REQEKKMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKIREQEEIWRQKEKMHEQEEKIRKQEEKVWRQE
EKIREQEEKIREQEEKMWRQEEKIREQEEMWREEEKMHEQEKIWEEEKRQEQEDKMWRQEEKIREQEEKV
WRQEEKIREQEEKRQEQEEKMWKQEEKIREQEEKIREQEEKIREQEEKIREQEEMTQEQEEKMGEQEEKM
CEQEEKMQEQEETMWRQEEKIREQEKKIREQEEKIREQEEMMQEQEEKMWEQEEKMCEQEEKMQEQEEKM
RRQEEKMWEQEVRLRQQEEKMQEH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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