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Report for CCDS45204.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45204.1 Public Homo sapiens 15 MTMR10 24 110 108 CCDS HistoryNCBI Gene:54893Re-query CCDS DB by CCDS ID:45204.1Re-query CCDS DB by GeneID:54893See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45204.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000435680.6 ENSP00000402537.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000435680.6Link to Ensembl Protein Viewer:ENSP00000402537.1Re-query CCDS DB by Nucleotide ID:ENST00000435680Re-query CCDS DB by Protein ID:ENSP00000402537
Original member Current member NCBI NM_017762.3 NP_060232.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017762.3Link to Protein Sequence:NP_060232.2Re-query CCDS DB by Nucleotide ID:NM_017762Re-query CCDS DB by Protein ID:NP_060232Link to BLAST:NP_060232.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060232.2 777 Q9NXD2-1 777 100% 0 0

Chromosomal Locations for CCDS 45204.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 30941470 30942072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 30942890 30943072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 30947130 30947300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 30948302 30948471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 30951968 30952038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 30953562 30953631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 30954763 30954893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 30958863 30958951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 30959034 30959121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 30960881 30961073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 30967920 30968010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 30974314 30974456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 30974931 30975003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 30976819 30976955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 30990777 30990837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 30991447 30991506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2334 nt):
ATGTTCTCCCTCAAGCCGCCCAAACCCACCTTCAGGTCCTACCTCCTGCCACCGCCCCAGACTGACGATA
AGATCAATTCGGAACCGAAGATTAAAAAACTGGAGCCAGTCCTTTTGCCAGGAGAAATTGTCGTAAATGA
AGTCAATTTTGTGAGAAAATGCATTGCAACAGACACAAGCCAGTACGATTTGTGGGGAAAGCTGATATGC
AGTAACTTCAAAATCTCCTTTATTACAGATGACCCAATGCCATTACAGAAATTCCATTACAGAAACCTTC
TTCTTGGTGAACACGATGTCCCTTTAACATGTATTGAGCAAATTGTCACAGTAAACGACCACAAGAGGAA
GCAGAAAGTCCTAGGCCCCAACCAGAAACTGAAATTTAATCCAACAGAGTTAATTATTTATTGTAAAGAT
TTCAGAATTGTCAGATTTCGCTTTGATGAATCAGGTCCCGAAAGTGCTAAAAAGGTATGCCTTGCAATAG
CTCATTATTCCCAGCCAACAGACCTCCAGCTACTCTTTGCATTTGAATATGTTGGGAAAAAATACCACAA
TTCAGCAAACAAAATTAATGGAATTCCCTCAGGAGATGGAGGAGGAGGAGGAGGAGGAGGTAATGGAGCT
GGTGGTGGCAGCAGCCAGAAAACTCCACTCTTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGGA
CAGGTGCTTCCGGGTGGAGAGTTTGTTCTATTAACGAGGGTTACATGATATCCACTTGCCTTCCAGAATA
CATTGTAGTGCCAAGTTCTTTAGCAGACCAAGATCTAAAGATCTTTTCCCATTCTTTTGTTGGGAGAAGG
ATGCCACTCTGGTGCTGGAGCCACTCTAACGGCAGTGCTCTTGTGCGAATGGCCCTCATCAAAGACGTGC
TGCAGCAGAGGAAGATTGACCAGAGGATTTGTAATGCAATAACTAAAAGTCACCCACAGAGAAGTGATGT
TTACAAATCAGATTTGGATAAGACCTTGCCTAATATTCAAGAAGTACAGGCAGCATTTGTAAAACTGAAG
CAGCTATGCGTTAATGAGCCTTTTGAAGAAACTGAAGAGAAATGGTTATCTTCACTGGAAAATACTCGAT
GGTTAGAATATGTAAGGGCATTCCTTAAGCATTCAGCAGAACTTGTATACATGCTAGAAAGCAAACATCT
CTCTGTAGTCCTACAAGAGGAGGAAGGAAGAGACTTGAGCTGTTGTGTAGCTTCTCTTGTTCAAGTGATG
CTGGATCCCTATTTTAGGACAATTACTGGATTTCAGAGTCTGATACAGAAGGAGTGGGTCATGGCAGGAT
ATCAGTTTCTAGACAGATGCAACCATCTAAAGAGATCAGAGAAAGAGTCTCCTTTATTTTTGCTATTCTT
GGATGCCACCTGGCAGCTGTTAGAACAATATCCTGCAGCTTTTGAGTTCTCCGAAACCTACCTGGCAGTG
TTGTATGACAGCACCCGGATCTCACTGTTTGGCACCTTCCTGTTCAACTCCCCTCACCAGCGAGTGAAGC
AAAGCACGGAATTTGCTATAAGCAAAAACATCCAATTGGGTGATGAGAAGGGCTTAAAATTCCCCTCTGT
TTGGGACTGGTCTCTCCAGTTTACAGCAAAGGATCGCACCCTTTTCCATAACCCCTTCTACATTGGAAAG
AGCACACCTTGTATACAGAATGGCTCCGTGAAGTCTTTTAAACGGACAAAGAAAAGCTACAGCTCCACAC
TAAGAGGAATGCCGTCTGCCTTAAAGAATGGAATCATCAGTGACCAAGAATTACTTCCAAGGAGAAATTC
ATTGATATTAAAACCAAAGCCAGATCCAGCTCAGCAAACCGACAGCCAGAACAGTGATACGGAGCAGTAT
TTTAGAGAATGGTTTTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCCACGTGTCTCTGGAACACACA
TAAAACTGTGGAAACTGTGCTACTTCCGCTGGGTTCCCGAGGCCCAGATCAGCCTGGGTGGCTCCATCAC
AGCCTTTCACAAGCTCTCCCTCCTGGCTGATGAAGTCGACGTACTGAGCAGGATGCTGCGGCAACAGCGC
AGTGGCCCCCTGGAGGCCTGCTATGGGGAGCTGGGCCAGAGCAGGATGTACTTCAACGCCAGCGGCCCTC
ACCACACCGACACCTCGGGGACACCGGAGTTTCTCTCCTCCTCATTTCCATTTTCTCCTGTAGGGAATCT
GTGCAGACGAAGCATTTTAGGAACACCATTAAGCAAATTTTTAAGTGGGGCCAAAATATGGTTGTCTACT
GAGACATTAGCAAATGAAGACTAA

Translation (777 aa):
MFSLKPPKPTFRSYLLPPPQTDDKINSEPKIKKLEPVLLPGEIVVNEVNFVRKCIATDTSQYDLWGKLIC
SNFKISFITDDPMPLQKFHYRNLLLGEHDVPLTCIEQIVTVNDHKRKQKVLGPNQKLKFNPTELIIYCKD
FRIVRFRFDESGPESAKKVCLAIAHYSQPTDLQLLFAFEYVGKKYHNSANKINGIPSGDGGGGGGGGNGA
GGGSSQKTPLFETYSDWDREIKRTGASGWRVCSINEGYMISTCLPEYIVVPSSLADQDLKIFSHSFVGRR
MPLWCWSHSNGSALVRMALIKDVLQQRKIDQRICNAITKSHPQRSDVYKSDLDKTLPNIQEVQAAFVKLK
QLCVNEPFEETEEKWLSSLENTRWLEYVRAFLKHSAELVYMLESKHLSVVLQEEEGRDLSCCVASLVQVM
LDPYFRTITGFQSLIQKEWVMAGYQFLDRCNHLKRSEKESPLFLLFLDATWQLLEQYPAAFEFSETYLAV
LYDSTRISLFGTFLFNSPHQRVKQSTEFAISKNIQLGDEKGLKFPSVWDWSLQFTAKDRTLFHNPFYIGK
STPCIQNGSVKSFKRTKKSYSSTLRGMPSALKNGIISDQELLPRRNSLILKPKPDPAQQTDSQNSDTEQY
FREWFSKPANLHGVILPRVSGTHIKLWKLCYFRWVPEAQISLGGSITAFHKLSLLADEVDVLSRMLRQQR
SGPLEACYGELGQSRMYFNASGPHHTDTSGTPEFLSSSFPFSPVGNLCRRSILGTPLSKFLSGAKIWLST
ETLANED


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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