NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS45332.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45332.1 Public Homo sapiens 15 FSD2 24 110 108 CCDS HistoryNCBI Gene:123722Re-query CCDS DB by CCDS ID:45332.1Re-query CCDS DB by GeneID:123722See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45332.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000334574.12 ENSP00000335651.8 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000334574.12Link to Ensembl Protein Viewer:ENSP00000335651.8Re-query CCDS DB by Nucleotide ID:ENST00000334574Re-query CCDS DB by Protein ID:ENSP00000335651
Original member Current member NCBI NM_001007122.4 NP_001007123.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001007122.4Link to Protein Sequence:NP_001007123.1Re-query CCDS DB by Nucleotide ID:NM_001007122Re-query CCDS DB by Protein ID:NP_001007123Link to BLAST:NP_001007123.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001007123.1 749 A1L4K1-1 749 100% 0 0

Chromosomal Locations for CCDS 45332.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 82759348 82759600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82762102 82762278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82765166 82765298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82765898 82766031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82768880 82769030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82769750 82769884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82772073 82772228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82778766 82778887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82780245 82780267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82782795 82783025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82786511 82786606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82786752 82787390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2250 nt):
ATGGAGGAGGAATCGGGGGAGGAACTGGGGCTGGACAGGTCTACTCCCAAGGATTTCCACTTTTACCACA
TGGACCTGTATGACTCTGAAGACAGACTGCACCTCTTTCCAGAAGAGAACACTAGGATGAGGAAAGTAGT
CCAAGCTGAAATGGCCAATGAGTCAAGAGGAGCAGGGGATGGTAAGGCTCAAAGAGACCTTCAAGAGGAA
GTGGATGAACTTGTCCACTTATATGGACTTGAAGATGATCATGAATTAGGGGATGAGTTTGTTGATGAAA
ACATACCCAGAACAGGGGTTTCAGAATATCCTCCTTATATGATGAAGAGGAGAGACCCAGCCAGGGAGCA
GAGAGACTGGAGACTTAGTGGAGAGGCAGCGGAGGCCGAGGACCTGGGCTTCGGAGGGTGGGGCTCAGCA
GGCCAGTGCCAGGACTTGCGGGAAGCCTATAGGTACACACACGGCCGTGCCAGCGAGGAGTATGAATGCT
ATGTCATCCCCGAGGAAGAGGATGAAGAAGAAGCTGCTGATGTCTTCTGTGTCACTTGTAAGACTCCAAT
AAGAGCTTTTCAGAAGGTTTTTGATGAACATAAGGAGCATGAAGTGATCCCACTCAATGAAGCACTGGAA
AGTGCCAAGGATGAAATTCACAAAAACATGTACAAATTGGAAAAGCAGATAATTGAGATGGAAAACTTTG
CAAATCATTTGGAGGAGGTTTTCATCACTGTGGAGGAGAATTTTGGAAAACAAGAACAAAACTTTGAGTC
ACATTACAACGAGATCTTGGAAACACTTGCTCAAAAATATGAGGAAAAAATACAAGCTCTAGGGGAGAAA
AAGAAAGAGAAGCTGGAAGCCTTATATGGACAACTGGTCAGCTGTGGAGAAAACCTAGATACTTGCAAAG
AACTGATGGAAACAATAGAGGAGATGTGTCACGAGGAGAAGGTGGATTTCATAAAGGATGCAGTGGCTAT
GGCTGACAGACTCGGGAAATTCCTGAAAACAAAAACAGACGTGGAAATCTCTGCACAGCCTGAGTTTGAA
GACCAGACCTTGGATTTCTCTGATGTGGAGCAGCTGATGGGCTCCATTAACACCATTCCAGCTCCTTCTG
CTCCAGTCATAAATCCACAGGTCCCTAACTCAGCCACAGGTTCCTCAGTCCGAGTGTGCTGGAGCTTATA
CTCCGACGACACTGTGGAGAGCTATCAGCTGTCCTACCGGCCAGTGCAGGACAGCTCACCTGGGACGGAC
CAAGCAGAGTTTACAGTGACTGTCAAAGAAACATATTGCTCAGTGACAAACCTTGTGCCAAATACCCAGT
ATGAATTTTGGGTCACAGCTCACAACAGGGCTGGCCCCAGCCCCTCTAGCGAGCGTGCAGTGTACATGAC
AGCACCTTCTCCCCCCATTATTAAAACCAAAGAGATAAGGAGCTGTGAAGAGGCTGTGCTGATTTGCTGG
GAGTCTGGGAACCTGAATCCTGTGGACTCGTACACTGTGGAGCTGACCCAGGCTGAAAGTCCAGAAGCCT
CGGGTGTAACTGAGTCTGTTGTGGGCATCCCGACCTGCGAGTCCGTGGTGCAGCTGCAGCCGGGGCGGAG
CTACATTATCTATGTGCGAGCCCTCAATATGGGGGGCCCCAGCGTGAGGAGCGAGCCAGCTACAGTCCAC
ACCATAGGAAGCTACTTTCGCCTAAACAAGGACACTTGCCATCCCTGGCTGACCATTTCTGAAGACGGAC
TTACGGCTGTACGAAGTGAAAGGAGAACCCCCGCCAGGGAGCTGTCACCCAGCGACACTCACTTCACCAG
GTGTGTTGCTGTCATGGGAAATCTAATTCCAGTCCGAGGGCACCATTACTGGGAGGTGGAGGTGGATGAG
CATTTGGACTACAGAGTTGGTGTGGCCTTTGCAGATGTCCGTAAACAGGAGGATCTGGGAGCAAATTGCC
TCTCCTGGTGCATGAGGCACACATTTGCATCATCAAGGCATAAGTATGAATTTCTGCACAACAGAACAAC
TCCAGATATAAGAATAACAGTTCCACCAAAGAAGATTGGCATTCTATTAGACTATGAACATTCAAAGTTG
TCATTTTTCAATGTGGACCTTTCTCAGCATCTATATACATTTAGTTGTCAGCTTCACGAATTTGTGCATC
CCTGTTTTTCTTTGGAAAAGCCTGGGTGTCTAAAGGTACATAATGGCATTTCAATGCCAAAACATGTCAC
TTTCTATTAG

Translation (749 aa):
MEEESGEELGLDRSTPKDFHFYHMDLYDSEDRLHLFPEENTRMRKVVQAEMANESRGAGDGKAQRDLQEE
VDELVHLYGLEDDHELGDEFVDENIPRTGVSEYPPYMMKRRDPAREQRDWRLSGEAAEAEDLGFGGWGSA
GQCQDLREAYRYTHGRASEEYECYVIPEEEDEEEAADVFCVTCKTPIRAFQKVFDEHKEHEVIPLNEALE
SAKDEIHKNMYKLEKQIIEMENFANHLEEVFITVEENFGKQEQNFESHYNEILETLAQKYEEKIQALGEK
KKEKLEALYGQLVSCGENLDTCKELMETIEEMCHEEKVDFIKDAVAMADRLGKFLKTKTDVEISAQPEFE
DQTLDFSDVEQLMGSINTIPAPSAPVINPQVPNSATGSSVRVCWSLYSDDTVESYQLSYRPVQDSSPGTD
QAEFTVTVKETYCSVTNLVPNTQYEFWVTAHNRAGPSPSSERAVYMTAPSPPIIKTKEIRSCEEAVLICW
ESGNLNPVDSYTVELTQAESPEASGVTESVVGIPTCESVVQLQPGRSYIIYVRALNMGGPSVRSEPATVH
TIGSYFRLNKDTCHPWLTISEDGLTAVRSERRTPARELSPSDTHFTRCVAVMGNLIPVRGHHYWEVEVDE
HLDYRVGVAFADVRKQEDLGANCLSWCMRHTFASSRHKYEFLHNRTTPDIRITVPPKKIGILLDYEHSKL
SFFNVDLSQHLYTFSCQLHEFVHPCFSLEKPGCLKVHNGISMPKHVTFY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH