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Report for CCDS45432.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45432.1 Public Homo sapiens 16 GP2 24 110 108 CCDS HistoryNCBI Gene:2813Re-query CCDS DB by CCDS ID:45432.1Re-query CCDS DB by GeneID:2813See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45432.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000341642.9 ENSP00000343861.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000341642.9Link to Ensembl Protein Viewer:ENSP00000343861.5Re-query CCDS DB by Nucleotide ID:ENST00000341642Re-query CCDS DB by Protein ID:ENSP00000343861
Original member Current member NCBI NM_001007242.3 NP_001007243.2 Accepted alive Link to Nucleotide Sequence:NM_001007242.3Link to Protein Sequence:NP_001007243.2Re-query CCDS DB by Nucleotide ID:NM_001007242Re-query CCDS DB by Protein ID:NP_001007243Link to BLAST:NP_001007243.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001007243.2 387 P55259-4 387 100% 0 0

Chromosomal Locations for CCDS 45432.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 20311223 20311281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20314657 20314701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20315956 20316040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20317213 20317375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20318185 20318430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20319620 20319768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20320262 20320473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20322869 20322979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20326338 20326431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1164 nt):
ATGCCTCACCTTATGGAAAGGATGGTGGGCTCTGGCCTCCTGTGGCTGGCCTTGGTCTCCTGCATTCTGA
CCCAGGCATCTGCAGTGCAGCGAGACCCATCCACTGTGGAGGACAAGTGTGAGAAGGCCTGCCGCCCCGA
GGAGGAGTGCCTTGCCCTCAACAGCACCTGGGGCTGTTTCTGCAGACAGGACCTCAATAGTTCTGATGTC
CACAGTTTGCAGCCTCAGCTAGACTGTGGGCCCAGGGAGATCAAGGTGAAGGTGGACAAATGTTTGCTGG
GAGGCCTGGGTTTGGGGGAGGAGGTCATTGCCTACCTGCGAGACCCAAACTGCAGCAGCATCTTGCAGAC
AGAGGAGAGGAACTGGGTATCTGTGACCAGCCCCGTCCAGGCTAGTGCCTGCAGGAACATTCTGGAGAGA
AATCAAACCCATGCCATCTACAAAAACACCCTCTCCTTGGTCAATGATTTCATCATCAGAGACACCATCC
TCAACATCAACTTCCAATGTGCCTACCCACTGGACATGAAAGTCAGCCTCCAAGCTGCCTTGCAGCCCAT
TGTAAGTTCCCTGAACGTCAGTGTGGACGGGAATGGAGAGTTCATTGTCAGGATGGCCCTCTTCCAAGAC
CAGAACTACACGAATCCTTACGAAGGGGATGCAGTTGAACTGTCTGTTGAGTCCGTGCTGTATGTGGGTG
CCATCTTGGAACAAGGGGACACCTCCCGGTTTAACCTGGTGTTGAGGAACTGCTATGCCACCCCCACTGA
AGACAAGGCTGACCTTGTGAAGTATTTCATCATCAGAAACAGCTGCTCAAATCAACGTGATTCCACCATC
CACGTGGAGGAGAATGGGCAGTCCTCGGAAAGCCGGTTCTCAGTTCAGATGTTCATGTTTGCTGGACATT
ATGACCTAGTTTTCCTGCATTGTGAGATTCATCTCTGTGATTCTCTTAATGAACAGTGCCAGCCTTCTTG
CTCAAGAAGTCAAGTCCGCAGTGAAGTACCGGCCATCGACCTAGCCCGGGTTCTAGATTTGGGGCCCATC
ACTCGGAGAGGTGCACAGTCTCCCGGTGTCATGAATGGAACCCCTAGCACTGCAGGGTTCCTGGTGGCCT
GGCCTATGGTCCTCCTGACTGTCCTCCTGGCTTGGCTGTTCTGA

Translation (387 aa):
MPHLMERMVGSGLLWLALVSCILTQASAVQRDPSTVEDKCEKACRPEEECLALNSTWGCFCRQDLNSSDV
HSLQPQLDCGPREIKVKVDKCLLGGLGLGEEVIAYLRDPNCSSILQTEERNWVSVTSPVQASACRNILER
NQTHAIYKNTLSLVNDFIIRDTILNINFQCAYPLDMKVSLQAALQPIVSSLNVSVDGNGEFIVRMALFQD
QNYTNPYEGDAVELSVESVLYVGAILEQGDTSRFNLVLRNCYATPTEDKADLVKYFIIRNSCSNQRDSTI
HVEENGQSSESRFSVQMFMFAGHYDLVFLHCEIHLCDSLNEQCQPSCSRSQVRSEVPAIDLARVLDLGPI
TRRGAQSPGVMNGTPSTAGFLVAWPMVLLTVLLAWLF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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