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Report for CCDS45494.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45494.1 Public Homo sapiens 16 KIFC3 24 110 108 CCDS HistoryNCBI Gene:3801Re-query CCDS DB by CCDS ID:45494.1Re-query CCDS DB by GeneID:3801See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45494.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000421376.6 ENSP00000396399.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000421376.6Link to Ensembl Protein Viewer:ENSP00000396399.2Re-query CCDS DB by Nucleotide ID:ENST00000421376Re-query CCDS DB by Protein ID:ENSP00000396399
Original member Current member EBI ENST00000465878.6 ENSP00000454659.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000465878.6Link to Ensembl Protein Viewer:ENSP00000454659.1Re-query CCDS DB by Nucleotide ID:ENST00000465878Re-query CCDS DB by Protein ID:ENSP00000454659
Original member Current member EBI ENST00000562903.5 ENSP00000456239.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000562903.5Link to Ensembl Protein Viewer:ENSP00000456239.1Re-query CCDS DB by Nucleotide ID:ENST00000562903Re-query CCDS DB by Protein ID:ENSP00000456239
Original member Current member NCBI NM_001130099.1 NP_001123571.1 Accepted alive Link to Nucleotide Sequence:NM_001130099.1Link to Protein Sequence:NP_001123571.1Re-query CCDS DB by Nucleotide ID:NM_001130099Re-query CCDS DB by Protein ID:NP_001123571Link to BLAST:NP_001123571.1
Original member Current member NCBI NM_001318714.2 NP_001305643.1 Accepted alive Link to Nucleotide Sequence:NM_001318714.2Link to Protein Sequence:NP_001305643.1Re-query CCDS DB by Nucleotide ID:NM_001318714Re-query CCDS DB by Protein ID:NP_001305643Link to BLAST:NP_001305643.1
Original member Current member NCBI NM_001318715.2 NP_001305644.1 Accepted alive Link to Nucleotide Sequence:NM_001318715.2Link to Protein Sequence:NP_001305644.1Re-query CCDS DB by Nucleotide ID:NM_001318715Re-query CCDS DB by Protein ID:NP_001305644Link to BLAST:NP_001305644.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001123571.1 687 Q9BVG8-5 687 100% 0 0
NP_001305643.1 687 Q9BVG8-5 687 100% 0 0
NP_001305644.1 687 Q9BVG8-5 687 100% 0 0

Chromosomal Locations for CCDS 45494.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 57759149 57759153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57759728 57759836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57760282 57760416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57760726 57760955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57761042 57761171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57761413 57761536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57762140 57762270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57764143 57764247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57765459 57765640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57766874 57766985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57769595 57769725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57769808 57769955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57770527 57770700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57771198 57771437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57771543 57771650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2064 nt):
ATGGTGGAGAATGAGCGACTGAGGCAGGAGATGCGGCGCTGTGAGGCCGAGCTGCAAGAGCTGCGCACAA
AGCCAGCAGGTCCCTGCCCAGGTTGTGAGCACAGCCAGGAGAGCGCCCAGCTCCGTGACAAGCTGTCCCA
GCTGCAGCTGGAGATGGCGGAAAGCAAAGGCATGCTGTCAGAGCTGAACCTAGAGGTGCAGCAGAAGACC
GACCGGCTGGCTGAGGTGGAGCTGCGACTCAAGGACTGCCTGGCTGAGAAGGCACAGGAGGAGGAGCGGC
TTAGTCGGCGCCTGCGTGACAGCCACGAGACCATTGCCAGCCTGCGGGCCCAGTCCCCACCTGTCAAGTA
TGTCATCAAGACAGTGGAGGTGGAGTCGTCCAAGACCAAGCAGGCCCTCAGCGAGTCCCAGGCCCGGAAC
CAGCACCTGCAGGAGCAGGTGGCTATGCAGAGGCAGGTGCTGAAGGAGATGGAACAGCAGCTGCAGAGCT
CACACCAGCTGACCGCGCGGCTCCGGGCGCAGATTGCCATGTACGAGTCAGAGCTGGAGCGGGCCCATGG
GCAGATGCTGGAGGAGATGCAGTCCCTGGAAGAGGACAAGAACCGGGCCATTGAGGAGGCCTTTGCCAGA
GCCCAGGTGGAGATGAAGGCTGTGCACGAGAATCTAGCAGGCGTCCGGACCAACTTGCTGACCTTGCAGC
CGGCACTGCGGACCCTCACCAACGACTACAATGGGCTCAAGCGGCAGGTGCGCGGCTTCCCACTGCTGCT
GCAGGAGGCCCTCAGGAGTGTCAAGGCCGAGATAGGCCAGGCCATCGAGGAGGTCAACAGCAACAACCAG
GAGCTGCTGCGCAAGTACCGCCGCGAGCTGCAGCTGCGTAAGAAGTGCCACAATGAGCTCGTGCGGCTGA
AAGGGAACATCCGAGTGATTGCTCGTGTCCGGCCAGTCACCAAAGAGGATGGGGAAGGACCTGAGGCCAC
CAATGCTGTGACTTTCGATGCCGACGACGACTCCATCATCCACCTGCTGCACAAGGGCAAGCCTGTGTCC
TTCGAGCTGGACAAGGTCTTCTCCCCACAGGCCTCGCAGCAGGACGTGTTCCAGGAGGTGCAGGCCCTGG
TCACCTCTTGCATTGATGGCTTCAATGTCTGCATCTTTGCGTACGGCCAGACGGGCGCCGGCAAGACGTA
CACGATGGAGGGGACCGCTGAGAACCCAGGTATCAACCAGCGGGCCCTGCAGCTGCTCTTCTCCGAGGTG
CAGGAGAAGGCGTCTGACTGGGAGTACACCATCACCGTCAGCGCTGCGGAGATCTACAATGAGGTCCTCA
GGGACCTGCTAGGGAAAGAGCCTCAGGAAAAACTGGAGATCCGGCTGTGCCCAGACGGCAGTGGGCAGCT
GTATGTACCAGGGCTGACTGAGTTCCAAGTGCAGAGCGTGGACGACATCAACAAGGTGTTTGAGTTTGGC
CACACTAATCGCACGACCGAGTTCACCAACCTGAACGAGCACAGCTCCCGCTCGCACGCGCTGCTCATCG
TGACGGTGCGAGGCGTGGACTGCAGCACAGGCCTCCGCACCACGGGGAAGCTGAACCTGGTGGACTTGGC
TGGCTCGGAGCGCGTGGGCAAGTCGGGGGCCGAGGGCAGCCGCCTGCGGGAGGCGCAGCACATCAACAAG
TCGCTGTCGGCTCTGGGGGACGTCATTGCTGCCCTGCGCTCCCGCCAGGGCCACGTGCCCTTCCGCAACT
CCAAGCTCACCTACCTGCTGCAGGATTCGCTTAGTGGTGACAGCAAGACCCTCATGGTGGTACAGGTGTC
CCCCGTGGAGAAGAACACTAGCGAGACGCTCTATTCCCTCAAGTTTGCTGAGAGGGTGCGCTCTGTGGAG
CTGGGGCCTGGGCTACGCAGGGCAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGCCGG
CTTGTCAGACGCCACAGCCCTCGGCACGGGCCCACTCAGCCCCCAGCTCTGGGACCAGTAGCCGCCCTGG
ATCCATCCGGAGGAAGCTGCAGCCCTCGGCCTGA

Translation (687 aa):
MVENERLRQEMRRCEAELQELRTKPAGPCPGCEHSQESAQLRDKLSQLQLEMAESKGMLSELNLEVQQKT
DRLAEVELRLKDCLAEKAQEEERLSRRLRDSHETIASLRAQSPPVKYVIKTVEVESSKTKQALSESQARN
QHLQEQVAMQRQVLKEMEQQLQSSHQLTARLRAQIAMYESELERAHGQMLEEMQSLEEDKNRAIEEAFAR
AQVEMKAVHENLAGVRTNLLTLQPALRTLTNDYNGLKRQVRGFPLLLQEALRSVKAEIGQAIEEVNSNNQ
ELLRKYRRELQLRKKCHNELVRLKGNIRVIARVRPVTKEDGEGPEATNAVTFDADDDSIIHLLHKGKPVS
FELDKVFSPQASQQDVFQEVQALVTSCIDGFNVCIFAYGQTGAGKTYTMEGTAENPGINQRALQLLFSEV
QEKASDWEYTITVSAAEIYNEVLRDLLGKEPQEKLEIRLCPDGSGQLYVPGLTEFQVQSVDDINKVFEFG
HTNRTTEFTNLNEHSSRSHALLIVTVRGVDCSTGLRTTGKLNLVDLAGSERVGKSGAEGSRLREAQHINK
SLSALGDVIAALRSRQGHVPFRNSKLTYLLQDSLSGDSKTLMVVQVSPVEKNTSETLYSLKFAERVRSVE
LGPGLRRAELGSWSSQEHLEWEPACQTPQPSARAHSAPSSGTSSRPGSIRRKLQPSA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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