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Report for CCDS45511.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45511.1 Public Homo sapiens 16 TMEM208 24 110 108 CCDS HistoryNCBI Gene:29100Re-query CCDS DB by CCDS ID:45511.1Re-query CCDS DB by GeneID:29100See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45511.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000304800.14 ENSP00000305892.9 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000304800.14Link to Ensembl Protein Viewer:ENSP00000305892.9Re-query CCDS DB by Nucleotide ID:ENST00000304800Re-query CCDS DB by Protein ID:ENSP00000305892
Original member Current member NCBI NM_014187.4 NP_054906.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014187.4Link to Protein Sequence:NP_054906.2Re-query CCDS DB by Nucleotide ID:NM_014187Re-query CCDS DB by Protein ID:NP_054906Link to BLAST:NP_054906.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_054906.2 173 Q9BTX3-1 173 100% 0 0

Chromosomal Locations for CCDS 45511.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 67227219 67227224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67227836 67227931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67228355 67228414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67228495 67228631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67228797 67228881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67228976 67229113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (522 nt):
ATGGCGCCCAAGGGCAAAGTGGGCACGAGAGGGAAGAAGCAGATATTTGAAGAGAACAGAGAGACTCTGA
AGTTCTACCTGCGGATCATACTGGGGGCCAATGCCATTTACTGCCTTGTGACGTTGGTCTTCTTTTACTC
ATCTGCCTCATTTTGGGCCTGGTTGGCCCTGGGCTTTAGTCTGGCAGTGTATGGGGCCAGCTACCACTCT
ATGAGCTCGATGGCACGAGCAGCGTTCTCTGAGGATGGGGCCCTGATGGATGGTGGCATGGACCTCAACA
TGGAGCAGGGCATGGCAGAGCACCTTAAGGATGTGATCCTACTGACAGCCATCGTGCAGGTGCTCAGCTG
CTTCTCTCTCTATGTCTGGTCCTTCTGGCTTCTGGCTCCAGGCCGGGCCCTTTACCTCCTGTGGGTGAAT
GTGCTGGGCCCCTGGTTCACTGCAGACAGTGGCACCCCAGCACCAGAGCACAATGAGAAACGGCAGCGCC
GACAGGAGCGGCGGCAGATGAAGCGGTTATAG

Translation (173 aa):
MAPKGKVGTRGKKQIFEENRETLKFYLRIILGANAIYCLVTLVFFYSSASFWAWLALGFSLAVYGASYHS
MSSMARAAFSEDGALMDGGMDLNMEQGMAEHLKDVILLTAIVQVLSCFSLYVWSFWLLAPGRALYLLWVN
VLGPWFTADSGTPAPEHNEKRQRRQERRQMKRL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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