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Report for CCDS45538.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45538.1 Public Homo sapiens 16 ZDHHC7 24 110 108 CCDS HistoryNCBI Gene:55625Re-query CCDS DB by CCDS ID:45538.1Re-query CCDS DB by GeneID:55625See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45538.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000344861.9 ENSP00000341681.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000344861.9Link to Ensembl Protein Viewer:ENSP00000341681.5Re-query CCDS DB by Nucleotide ID:ENST00000344861Re-query CCDS DB by Protein ID:ENSP00000341681
Original member Current member EBI ENST00000564466.5 ENSP00000456782.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000564466.5Link to Ensembl Protein Viewer:ENSP00000456782.1Re-query CCDS DB by Nucleotide ID:ENST00000564466Re-query CCDS DB by Protein ID:ENSP00000456782
Original member Current member NCBI NM_001145548.2 NP_001139020.1 Accepted alive Link to Nucleotide Sequence:NM_001145548.2Link to Protein Sequence:NP_001139020.1Re-query CCDS DB by Nucleotide ID:NM_001145548Re-query CCDS DB by Protein ID:NP_001139020Link to BLAST:NP_001139020.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001139020.1 345 Q9NXF8-2 345 100% 0 0

Chromosomal Locations for CCDS 45538.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 84976343 84976519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 84977095 84977225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 84977924 84978005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 84979189 84979285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 84981870 84981994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 84988763 84988873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 84990304 84990618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1038 nt):
ATGCAGCCATCAGGACACAGGCTCCGGGACGTCGAGCATCATCCTCTCCTGGCTGAAAATGACAACTATG
ACTCTTCATCGTCCTCCTCCTCCGAGGCTGACGTGGCTGACCGGGTCTGGTTCATCCGTGACGGCTGCGG
CATGATCTGTGCTGTCATGACGTGGCTTCTGGTCGCCTATGCAGACTTCGTGGTGACTTTCGTCATGCTG
CTGCCTTCCAAAGACTTCTGGTACTCTGTGGTCAACGGGGTCATCTTTAACTGCTTGGCCGTGCTTGCCC
TGTCATCCCACCTGAGAACCATGCTCACCGACCCTGAAAAATCCAGTGACTGCCGACCATCTGCCTGCAC
AGTGAAAACTGGGCTGGACCCAACCCTTGTGGGCATTTGTGGTGAGGGAACCGAGTCTGTGCAAAGCCTC
CTGCTTGGGGCAGTACCCAAAGGAAACGCTACGAAAGAATACATGGAGAGCTTGCAGCTGAAGCCCGGGG
AAGTCATCTACAAGTGCCCCAAGTGCTGCTGTATTAAACCCGAGCGCGCCCACCACTGCAGTATTTGCAA
AAGATGTATTCGGAAAATGGATCATCACTGCCCGTGGGTGAACAATTGTGTAGGAGAAAAGAATCAAAGA
TTTTTTGTGCTCTTCACTATGTATATAGCTCTGTCTTCAGTCCATGCTCTGATCCTTTGTGGATTTCAGT
TCATCTCCTGTGTCCGAGGGCAGTGGACTGAATGCAGTGATTTTTCACCTCCGATAACTGTAATCCTGTT
GATCTTCCTGTGCCTTGAGGGTCTTCTGTTTTTCACTTTCACTGCAGTTATGTTTGGCACCCAAATCCAC
TCCATATGCAACGACGAGACGGAGATCGAGCGATTGAAAAGTGAGAAGCCCACATGGGAGCGGAGGCTGC
GATGGGAAGGGATGAAGTCCGTCTTTGGGGGGCCCCCCTCACTCCTCTGGATGAATCCCTTTGTGGGCTT
CCGATTTAGGCGACTGCCCACGAGACCCAGAAAAGGTGGCCCGGAGTTCTCAGTGTGA

Translation (345 aa):
MQPSGHRLRDVEHHPLLAENDNYDSSSSSSSEADVADRVWFIRDGCGMICAVMTWLLVAYADFVVTFVML
LPSKDFWYSVVNGVIFNCLAVLALSSHLRTMLTDPEKSSDCRPSACTVKTGLDPTLVGICGEGTESVQSL
LLGAVPKGNATKEYMESLQLKPGEVIYKCPKCCCIKPERAHHCSICKRCIRKMDHHCPWVNNCVGEKNQR
FFVLFTMYIALSSVHALILCGFQFISCVRGQWTECSDFSPPITVILLIFLCLEGLLFFTFTAVMFGTQIH
SICNDETEIERLKSEKPTWERRLRWEGMKSVFGGPPSLLWMNPFVGFRFRRLPTRPRKGGPEFSV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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