NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS45554.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45554.1 Public Homo sapiens 16 ZNF276 24 110 108 CCDS HistoryNCBI Gene:92822Re-query CCDS DB by CCDS ID:45554.1Re-query CCDS DB by GeneID:92822See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45554.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000443381.7 ENSP00000415836.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000443381.7Link to Ensembl Protein Viewer:ENSP00000415836.2Re-query CCDS DB by Nucleotide ID:ENST00000443381Re-query CCDS DB by Protein ID:ENSP00000415836
Original member Current member NCBI NM_001113525.2 NP_001106997.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001113525.2Link to Protein Sequence:NP_001106997.1Re-query CCDS DB by Nucleotide ID:NM_001113525Re-query CCDS DB by Protein ID:NP_001106997Link to BLAST:NP_001106997.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001106997.1 614 Q8N554-1 614 100% 0 0

Chromosomal Locations for CCDS 45554.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 89721641 89721845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89722531 89722834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89723137 89723183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89723260 89723709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89727279 89727357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89729235 89729318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89733302 89733412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89733482 89733557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89733921 89734038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89737806 89737905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89737976 89738246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1845 nt):
ATGAAGCGGGACCGGCTGGGCCGCTTCCTGTCTCCTGGGTCGTCCCGACAGTGCGGGGCCTCGGACGGCG
GCGGCGGCGTCAGCCGGACTCGGGGCCGCCCTTCCCTTAGCGGTGGGCCGAGGGTGGACGGGGCGACGGC
GCGGCGCGCCTGGGGCCCGGTGGGGTCCTGCGGGGACGCGGGCGAGGACGGCGCGGACGAGGCAGGAGCA
GGCCGGGCTCTCGCCATGGGTCACTGTCGCCTCTGCCACGGGAAGTTTTCCTCGAGAAGCCTGCGCAGCA
TCTCCGAGAGGGCGCCTGGAGCGAGCATGGAGAGGCCATCCGCAGAGGAGCGCGTGCTCGTACGGGACTT
CCAGCGCCTGCTTGGTGTGGCTGTCCGCCAGGACCCCACCTTGTCTCCGTTTGTCTGCAAGAGCTGCCAC
GCCCAGTTCTACCAGTGCCACAGCCTTCTCAAGTCCTTCCTGCAGAGGGTCAACGCCTCCCCGGCTGGTC
GCCGGAAGCCTTGTGCAAAGGTCGGTGCCCAGCCCCCAACAGGGGCAGAGGAGGGAGCGTGTCTGGTGGA
TCTGATCACATCCAGCCCCCAGTGCCTGCACGGCTTGGTGGGGTGGGTGCATGGACATGCGGCCAGCTGC
GGGGCCCTGCCCCACCTTCAGAGGACACTGTCCTCCGAGTACTGCGGCGTCATCCAGGTCGTGTGGGGCT
GCGACCAGGGCCACGACTACACCATGGATACCAGCTCCAGCTGCAAGGCCTTCTTGCTGGACAGTGCGCT
GGCAGTCAAGTGGCCATGGGACAAAGAGACGGCGCCACGGCTGCCCCAGCACCGAGGGTGGAACCCTGGG
GATGCCCCTCAGACCTCCCAGGGTAGAGGGACAGGGACCCCAGTTGGGGCTGAGACCAAGACCCTGCCCA
GCACGGATGTGGCCCAGCCTCCTTCGGACAGCGACGCGGTGGGGCCCAGGTCGGGCTTCCCACCTCAGCC
AAGCCTGCCCCTTTGCAGGGCCCCAGGGCAGTTGGGTGAGAAGCAGCTTCCATCTTCAACCTCGGATGAT
CGGGTAAAAGACGAGTTCAGTGACCTTTCTGAGGGAGACGTCTTGAGTGAAGATGAAAATGACAAGAAGC
AAAATGCCCAGTCTTCGGACGAGTCCTTTGAGCCTTACCCAGAAAGGAAAGTCTCTGGTAAGAAGAGTGA
AAGCAAAGAAGCCAAGAAGTCTGAAGAACCAAGAATTCGGAAGAAGCCGGGACCCAAGCCCGGATGGAAG
AAGAAGCTTCGTTGTGAGAGGGAGGAGCTTCCCACCATCTACAAGTGTCCTTACCAGGGCTGCACGGCCG
TGTACCGAGGCGCTGACGGCATGAAGAAGCACATCAAGGAGCACCACGAGGAGGTCCGGGAGCGGCCCTG
CCCCCACCCTGGCTGCAACAAGGTTTTCATGATCGACCGCTACCTGCAGCGCCACGTGAAGCTCATCCAC
ACAGAGGTGCGGAACTATATCTGTGACGAATGTGGACAAACCTTCAAGCAGCGGAAGCACCTTCTCGTCC
ACCAAATGCGACATTCGGGAGCCAAGCCTTTGCAGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAGCGGGC
ATCCCTCAAGTACCACATGACCAAACACAAGGCTGAGACTGAGCTGGACTTTGCCTGTGACCAGTGTGGC
CGGCGGTTTGAGAAGGCCCACAACCTCAATGTACACATGTCCATGGTGCACCCGCTGACACAGACCCAGG
ACAAGGCCCTGCCCCTGGAGGCGGAACCACCACCTGGGCCACCGAGCCCCTCTGTGACCACAGAGGGCCA
GGCGGTGAAGCCCGAACCCACCTGA

Translation (614 aa):
MKRDRLGRFLSPGSSRQCGASDGGGGVSRTRGRPSLSGGPRVDGATARRAWGPVGSCGDAGEDGADEAGA
GRALAMGHCRLCHGKFSSRSLRSISERAPGASMERPSAEERVLVRDFQRLLGVAVRQDPTLSPFVCKSCH
AQFYQCHSLLKSFLQRVNASPAGRRKPCAKVGAQPPTGAEEGACLVDLITSSPQCLHGLVGWVHGHAASC
GALPHLQRTLSSEYCGVIQVVWGCDQGHDYTMDTSSSCKAFLLDSALAVKWPWDKETAPRLPQHRGWNPG
DAPQTSQGRGTGTPVGAETKTLPSTDVAQPPSDSDAVGPRSGFPPQPSLPLCRAPGQLGEKQLPSSTSDD
RVKDEFSDLSEGDVLSEDENDKKQNAQSSDESFEPYPERKVSGKKSESKEAKKSEEPRIRKKPGPKPGWK
KKLRCEREELPTIYKCPYQGCTAVYRGADGMKKHIKEHHEEVRERPCPHPGCNKVFMIDRYLQRHVKLIH
TEVRNYICDECGQTFKQRKHLLVHQMRHSGAKPLQCEVCGFQCRQRASLKYHMTKHKAETELDFACDQCG
RRFEKAHNLNVHMSMVHPLTQTQDKALPLEAEPPPGPPSPSVTTEGQAVKPEPT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH