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Report for CCDS45808.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45808.1 Public Homo sapiens 17 CEP131 24 110 108 CCDS HistoryNCBI Gene:22994Re-query CCDS DB by CCDS ID:45808.1Re-query CCDS DB by GeneID:22994See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45808.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000450824.7 ENSP00000393583.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000450824.7Link to Ensembl Protein Viewer:ENSP00000393583.2Re-query CCDS DB by Nucleotide ID:ENST00000450824Re-query CCDS DB by Protein ID:ENSP00000393583
Original member Current member NCBI NM_014984.4 NP_055799.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014984.4Link to Protein Sequence:NP_055799.2Re-query CCDS DB by Nucleotide ID:NM_014984Re-query CCDS DB by Protein ID:NP_055799Link to BLAST:NP_055799.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055799.2 1080 Q9UPN4-2 1080 100% 0 0

Chromosomal Locations for CCDS 45808.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 81189769 81189843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81189915 81189975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81190639 81190802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81190907 81191084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81191193 81191335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81192318 81192392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81192476 81192593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81192736 81192843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81193926 81194127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81194870 81194972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81195835 81195951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81196701 81196826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81196930 81197055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81197712 81197888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81198115 81198297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81198877 81198971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81199381 81199549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81199719 81199835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81200329 81200446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81202240 81202398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81203494 81203607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81206744 81206871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81207125 81207239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81208928 81209022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81219880 81220056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3243 nt):
ATGAAAGGCACCCGGGCCATCGGCAGCGTCCCGGAGCGCAGCCCAGCAGGTGTGGACCTGAGTCTGACAG
GTCTCCCTCCGCCTGTGTCCCGGCGTCCTGGCAGTGCCGCCACCACCAAGCCCATCGTCCGCTCTGTCTC
CGTGGTCACAGGCAGCGAGCAGAAGAGGAAGGTGCTGGAGGCCACAGGGCCTGGGGGCTCCCAGGCCATC
AACAACCTTAGAAGATCCAACAGCACCACGCAGGTCAGCCAGCCTCGGAGCGGCTCCCCCAGGCCAACGG
AGCCCACAGACTTCCTGATGCTCTTCGAGGGCAGCCCCAGTGGGAAAAAGAGGCCTGCCAGCCTGAGCAC
AGCCCCCAGCGAGAAGGGAGCCACCTGGAACGTCCTGGATGACCAGCCCCGGGGCTTCACCTTGCCATCC
AATGCCCGGAGTTCCAGTGCCCTTGACTCACCAGCGGGCCCGCGGAGGAAAGAATGCACCGTGGCCCTGG
CCCCCAACTTCACTGCTAACAACAGGAGCAACAAGGGAGCAGTGGGCAACTGCGTCACCACCATGGTGCA
CAACCGCTACACCCCCTCGGAGAGGGCGCCTCCGCTCAAGAGCTCCAACCAGACTGCCCCCTCCCTCAAC
AACATCATCAAGGCAGCCACCTGTGAGGGCAGTGAGAGCAGCGGCTTTGGGAAGCTGCCGAAGAATGTCT
CCAGTGCCACCCACTCAGCCCGGAACAATACTGGGGGCAGCACGGGCTTGCCCAGGCGGAAGGAGGTGAC
GGAGGAGGAGGCTGAGAGGTTTATCCACCAGGTGAACCAGGCCACTGTCACCATCCAGCGCTGGTACCGG
CACCAGGTGCAGCGGCGCGGAGCAGGAGCTGCCCGCCTGGAGCACTTGCTTCAGGCCAAGCGGGAGGAGC
AGCGGCAGCGGTCAGGCGAGGGGACCCTCTTGGACCTGCACCAGCAGAAAGAGGCAGCCAGGAGGAAGGC
CCGGGAGGAGAAGGCACGCCAAGCCAGGCGAGCAGCCATTCAGGAGCTGCAACAGAAACGAGCCCTGAGA
GCCCAGAAGGCGAGCACTGCCGAGCGTGGGCCACCTGAGAATCCCAGGGAGACCAGAGTGCCAGGAATGC
GGCAGCCTGCTCAGGAGCTGTCCCCCACACCAGGCGGCACTGCCCACCAGGCCCTCAAGGCCAACAATAC
TGGTGGTGGCCTCCCTGCTGCAGGCCCCGGAGACCGCTGCCTGCCCACCTCCGACTCATCCCCAGAACCA
CAGCAGCCTCCAGAGGACAGGACGCAGGACGTTCTTGCCCAGGATGCAGCTGGGGACAACCTGGAGATGA
TGGCCCCGAGCAGGGGGAGCGCCAAGTCCAGGGGGCCACTGGAGGAGCTGCTGCACACACTGCAGCTGCT
GGAGAAGGAGCCGGACGTGCTGCCCCGCCCCAGGACCCATCACAGGGGCAGATACGCCTGGGCCAGCGAG
GAGGATGACGCCAGCTCTCTGACAGCTGACAACTTGGAGAAATTTGGAAAACTCAGTGCGTTCCCCGAAC
CTCCTGAGGATGGGACGCTGCTATCGGAGGCCAAGCTACAAAGCATCATGAGCTTCTTGGACGAGATGGA
GAAGTCTGGGCAGGACCAGCTGGACTCCCAGCAGGAGGGGTGGGTGCCGGAGGCGGGGCCGGGGCCCCTG
GAGCTGGGGTCCGAGGTGAGCACGTCTGTGATGCGGCTGAAGCTGGAGGTGGAGGAGAAGAAGCAGGCCA
TGCTGCTGCTGCAGAGAGCGCTGGCGCAGCAGCGAGACCTCACGGCCCGGCGGGTCAAGGAGACAGAGAA
GGCGCTGAGCCGGCAGCTGCAGCGGCAGAGGGAGCACTACGAGGCCACCATCCAGCGGCACTTGGCCTTC
ATTGACCAGCTGATTGAGGACAAGAAGGTCCTGAGTGAAAAGTGCGAGGCTGTGGTGGCCGAGCTGAAGC
AGGAGGACCAGAGATGCACCGAGCGTGTGGCCCAGGCACAGGCGCAGCACGAGCTGGAGATTAAAAAACT
CAAAGAATTAATGAGCGCCACCGAGAAAGCCCGCCGGGAGAAGTGGATCAGTGAGAAAACCAAGAAGATC
AAGGAGGTCACTGTCCGAGGTCTGGAGCCCGAGATCCAGAAGCTGATTGCAAGGCACAAGCAGGAAGTGC
GGAGGCTCAAGAGCCTGCACGAGGCGGAGCTGCTGCAGTCGGATGAGCGGGCCTCGCAGCGCTGCCTGCG
CCAGGCCGAGGAGCTGCGGGAGCAGCTGGAGCGGGAGAAGGAGGCGCTGGGCCAGCAGGAGCGCGAACGT
GCTCGGCAGCGGTTCCAGCAGCACCTGGAGCAGGAGCAGTGGGCGCTGCAGCAGCAACGGCAGCGGCTGT
ACAGTGAGGTGGCTGAGGAGAGGGAGCGGCTGGGCCAGCAGGCAGCCAGGCAGCGGGCGGAGCTGGAAGA
GCTGAGGCAGCAGCTGGAGGAGAGCAGCTCTGCACTGACCCGAGCCCTGAGGGCTGAGTTTGAGAAGGGC
AGGGAGGAGCAGGAGCGCCGGCACCAGATGGAGCTGAATACCCTGAAGCAGCAGCTGGAGCTGGAGAGGC
AGGCGTGGGAGGCCGGCCGCACCAGGAAGGAGGAGGCGTGGCTGCTGAACCGGGAACAGGAGCTGAGGGA
AGAAATCCGGAAAGGCCGGGACAAGGAGATTGAGCTGGTCATTCACCGGCTGGAGGCCGACATGGCGCTG
GCCAAGGAGGAGAGTGAGAAGGCTGCCGAGAGCCGCATCAAGCGCTTACGGGACAAGTACGAGGCCGAGC
TCTCCGAGCTGGAGCAGTCGGAGCGGAAGCTTCAGGAGCGGTGCTCGGAGCTGAAGGGCCAGCTTGGGGA
GGCCGAGGGCGAGAATCTGCGTCTGCAGGGCCTTGTGCGGCAGAAGGAGCGGGCGCTGGAGGATGCGCAG
GCGGTGAACGAGCAGCTTTCTAGCGAGCGCAGCAACCTGGCCCAGGTGATCCGCCAGGAGTTCGAGGACC
GGCTGGCAGCCTCTGAGGAGGAGACGCGGCAGGCCAAGGCCGAGCTGGCCACGCTGCAGGCCCGCCAGCA
GCTGGAGCTGGAGGAGGTGCACCGGAGGGTGAAGACAGCCCTCGCGAGGAAGGAGGAGGCCGTGAGCAGC
CTCCGGACACAACATGAGGCTGCGGTGAAGCGGGCCGACCACCTGGAGGAGCTGCTGGAGCAGCACAGGA
GGCCCACGCCAAGTACCAAGTGA

Translation (1080 aa):
MKGTRAIGSVPERSPAGVDLSLTGLPPPVSRRPGSAATTKPIVRSVSVVTGSEQKRKVLEATGPGGSQAI
NNLRRSNSTTQVSQPRSGSPRPTEPTDFLMLFEGSPSGKKRPASLSTAPSEKGATWNVLDDQPRGFTLPS
NARSSSALDSPAGPRRKECTVALAPNFTANNRSNKGAVGNCVTTMVHNRYTPSERAPPLKSSNQTAPSLN
NIIKAATCEGSESSGFGKLPKNVSSATHSARNNTGGSTGLPRRKEVTEEEAERFIHQVNQATVTIQRWYR
HQVQRRGAGAARLEHLLQAKREEQRQRSGEGTLLDLHQQKEAARRKAREEKARQARRAAIQELQQKRALR
AQKASTAERGPPENPRETRVPGMRQPAQELSPTPGGTAHQALKANNTGGGLPAAGPGDRCLPTSDSSPEP
QQPPEDRTQDVLAQDAAGDNLEMMAPSRGSAKSRGPLEELLHTLQLLEKEPDVLPRPRTHHRGRYAWASE
EDDASSLTADNLEKFGKLSAFPEPPEDGTLLSEAKLQSIMSFLDEMEKSGQDQLDSQQEGWVPEAGPGPL
ELGSEVSTSVMRLKLEVEEKKQAMLLLQRALAQQRDLTARRVKETEKALSRQLQRQREHYEATIQRHLAF
IDQLIEDKKVLSEKCEAVVAELKQEDQRCTERVAQAQAQHELEIKKLKELMSATEKARREKWISEKTKKI
KEVTVRGLEPEIQKLIARHKQEVRRLKSLHEAELLQSDERASQRCLRQAEELREQLEREKEALGQQERER
ARQRFQQHLEQEQWALQQQRQRLYSEVAEERERLGQQAARQRAELEELRQQLEESSSALTRALRAEFEKG
REEQERRHQMELNTLKQQLELERQAWEAGRTRKEEAWLLNREQELREEIRKGRDKEIELVIHRLEADMAL
AKEESEKAAESRIKRLRDKYEAELSELEQSERKLQERCSELKGQLGEAEGENLRLQGLVRQKERALEDAQ
AVNEQLSSERSNLAQVIRQEFEDRLAASEEETRQAKAELATLQARQQLELEEVHRRVKTALARKEEAVSS
LRTQHEAAVKRADHLEELLEQHRRPTPSTK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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