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Report for CCDS45824.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45824.1 Public Homo sapiens 18 MYOM1 24 110 108 CCDS HistoryNCBI Gene:8736Re-query CCDS DB by CCDS ID:45824.1Re-query CCDS DB by GeneID:8736See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45824.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000356443.9 ENSP00000348821.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000356443.9Link to Ensembl Protein Viewer:ENSP00000348821.4Re-query CCDS DB by Nucleotide ID:ENST00000356443Re-query CCDS DB by Protein ID:ENSP00000348821
Original member Current member NCBI NM_003803.4 NP_003794.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003803.4Link to Protein Sequence:NP_003794.3Re-query CCDS DB by Nucleotide ID:NM_003803Re-query CCDS DB by Protein ID:NP_003794Link to BLAST:NP_003794.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003794.3 1685 P52179-1 1685 100% 0 0

Chromosomal Locations for CCDS 45824.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 3067262 3067555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3071834 3071889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3075454 3075476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3075725 3075761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3079179 3079342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3083789 3083894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3083989 3084027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3085045 3085132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3086038 3086151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3089174 3089241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3089537 3089596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3090658 3090802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3094170 3094306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3100159 3100203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3100320 3100426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3102474 3102630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3112298 3112412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3116331 3116515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3119869 3119995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3126701 3126897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3129232 3129519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3131375 3131496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3134650 3134824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3135547 3135730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3141939 3142063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3149145 3149201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3151694 3151893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3154947 3155088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3164278 3164439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3168817 3168981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3173938 3174000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3174120 3174208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3176042 3176134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3187480 3187637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3188748 3189087 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3193818 3193958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3214934 3215223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5058 nt):
ATGTCTTTGCCTTTTTATCAGAGGTGCCACCAGCACTATGATCTCAGCTACCGCAACAAGGACGTGCGCA
GCACCGTGAGTCACTACCAGCGGGAGAAGAAACGCTCCGCCGTCTACACCCAGGGCTCCACGGCCTACAG
CAGCCGCTCCTCCGCCGCGCACCGCCGGGAGTCCGAGGCCTTCCGTCGGGCGTCCGCCTCCTCCTCCCAG
CAGCAGGCCTCGCAGCACGCCCTGAGCTCTGAAGTCAGTCGGAAGGCAGCCTCAGCCTACGATTATGGCT
CCTCCCATGGACTTACAGATTCCAGTCTGCTGTTAGATGATTATTCATCCAAGTTGAGCCCCAAACCAAA
GAGAGCCAAGCACAGCCTACTGTCTGGAGAAGAGAAAGAAAATTTGCCCAGTGACTACATGGTACCCATT
TTCTCAGGACGTCAAAAGCATGTCAGTGGAATTACTGATACGGAAGAAGAAAGAATTAAAGAAGCTGCTG
CTTATATAGCCCAGAGGAATCTTCTTGCTAGTGAGGAAGGAATCACAACATCTAAACAGTCCACGGCATC
CAAGCAGACCACGGCATCTAAGCAGTCCACGGCATCCAAGCAGTCCACAGCATCCAAGCAGTCCACGGCA
TCCAGGCAGTCCACGGCATCCAGGCAGTCTGTGGTTTCCAAACAGGCCACATCCGCTCTTCAACAGGAAG
AAACTTCTGAAAAGAAGTCAAGGAAAGTTGTGATTCGAGAAAAGGCAGAACGCCTGTCCCTGAGGAAAAC
ATTAGAAGAAACCGAGACATATCATGCCAAGCTGAATGAAGACCATCTTCTCCATGCTCCTGAGTTTATC
ATTAAACCTCGCTCCCACACGGTTTGGGAGAAGGAGAATGTAAAATTGCATTGCTCCATAGCAGGCTGGC
CAGAACCTCGTGTCACGTGGTATAAAAACCAGGTGCCAATAAATGTCCATGCAAACCCTGGAAAGTATAT
TATTGAGAGTCGATATGGGATGCACACTCTGGAGATTAATGGATGTGATTTTGAAGATACAGCTCAGTAC
CGGGCCTCGGCGATGAATGTTAAAGGAGAGCTTTCGGCATATGCTTCAGTTGTGGTAAAAAGGTATAAGG
GAGAGTTTGATGAGACTCGCTTCCACGCTGGGGCTTCCACCATGCCCCTCAGCTTTGGTGTGACCCCATA
TGGTTATGCATCCCGGTTTGAGATCCACTTTGATGACAAATTTGATGTGTCTTTTGGGAGAGAGGGAGAG
ACAATGAGTCTAGGCTGTCGTGTTGTCATCACTCCTGAAATTAAACATTTCCAGCCAGAGATCCAGTGGT
ACAGAAACGGAGTACCTCTTTCTCCATCAAAATGGGTGCAAACACTTTGGAGTGGAGAGCGGGCAACGCT
GACATTTTCCCATCTCAACAAAGAAGATGAAGGCCTCTATACAATCCGTGTACGGATGGGAGAATATTAT
GAACAATATAGTGCTTATGTCTTTGTTCGAGATGCTGATGCAGAGATTGAAGGAGCCCCAGCTGCTCCCT
TGGATGTGAAGTGCTTGGAGGCCAACAAAGATTATATCATCATCTCCTGGAAACAGCCAGCTGTCGATGG
AGGGAGTCCTATTCTCGGATATTTTATTGATAAGTGTGAGGTGGGCACAGATAGCTGGTCGCAGTGCAAT
GACACACCTGTGAAGTTTGCTCGTTTTCCTGTCACTGGATTGATCGAAGGTCGTTCCTATATCTTCCGAG
TTCGAGCTGTGAATAAAATGGGAATAGGTTTCCCATCTCGAGTTTCCGAGCCCGTGGCTGCTCTGGATCC
GGCTGAGAAAGCTAGACTTAAAAGTCGCCCCTCAGCACCCTGGACTGGACAGATCATTGTTACTGAAGAG
GAACCTTCAGAGGGTATTGTGCCTGGCCCCCCGACAGACCTCTCTGTCACTGAGGCCACCCGGAGCTATG
TGGTGCTCAGCTGGAAGCCCCCTGGCCAGCGTGGTCATGAGGGCATTATGTACTTTGTGGAAAAGTGTGA
GGCAGGAACAGAAAACTGGCAGCGAGTGAACACGGAGCTCCCTGTGAAGTCTCCCCGCTTTGCTCTGTTT
GACTTGGCCGAGGGGAAATCCTACTGTTTCCGTGTCCGCTGTTCTAATTCTGCAGGAGTTGGTGAGCCCT
CAGAGGCAACGGAGGTGACTGTGGTAGGGGACAAACTTGATATCCCCAAGGCTCCTGGCAAAATCATCCC
AAGCAGAAACACAGACACCTCAGTGGTAGTTTCGTGGGAGGAGTCCAAAGATGCCAAAGAGCTGGTCGGG
TACTACATAGAGGCGAGCGTTGCTGGCTCTGGCAAGTGGGAGCCCTGTAACAACAACCCCGTGAAGGGCT
CACGATTCACTTGTCATGGATTAGTGACTGGTCAGAGTTATATTTTCCGGGTCAGAGCAGTCAATGCAGC
TGGACTTAGTGAATATTCCCAGGATTCAGAAGCTATTGAAGTCAAAGCTGCTATTGGGGGAGGAGTGTCT
CCAGATGTGTGTCCCGCACTGAGCGATGAGCCTGGTGGACTAACCGCCTCCAGGGGGCGCGTGCATGAAG
CCTCCCCGCCAACCTTCCAGAAAGATGCTTTGCTTGGCAGCAAACCTAACAAACCTTCACTACCCAGTAG
CTCTCAAAACCTGGGCCAAACAGAAGTGAGTAAAGTAAGTGAAACAGTTCAGGAAGAGCTTACCCCGCCA
CCACAGAAAGCGGCTCCTCAGGGGAAAAGTAAGTCTGACCCCCTGAAAAAGAAGACAGACAGAGCACCAC
CATCTCCACCCTGTGATATCACCTGTCTTGAAAGTTTTCGTGACTCAATGGTTCTTGGATGGAAGCAACC
AGATAAGATTGGAGGGGCAGAAATTACTGGCTATTATGTGAACTATCGCGAGGTCATTGATGGGGTACCA
GGAAAATGGAGAGAAGCCAATGTCAAGGCTGTCAGTGAGGAGGCATACAAGATTAGCAACTTGAAGGAAA
ACATGGTGTATCAGTTCCAAGTGGCAGCCATGAACATGGCTGGGCTGGGCGCGCCCTCCGCAGTAAGCGA
ATGCTTCAAATGTGAAGAGTGGACCATCGCCGTCCCAGGACCACCGCACAGTCTCAAGTGTAGTGAAGTC
AGGAAAGACTCACTGGTTCTCCAGTGGAAGCCGCCAGTCCACTCCGGGCGGACTCCGGTCACTGGTTACT
TCGTGGACTTGAAGGAGGCCAAGGCCAAAGAAGACCAGTGGCGAGGGCTCAATGAGGCGGCTATTAAAAA
CGTATACCTGAAGGTTCGAGGCCTCAAGGAGGGCGTCAGCTACGTGTTCCGTGTTCGAGCCATAAACCAG
GCGGGAGTTGGGAAGCCATCTGACCTTGCTGGCCCTGTTGTGGCAGAGACCCGTCCAGGAACCAAAGAGG
TTGTTGTAAATGTGGATGATGATGGAGTCATTTCATTGAACTTCGAGTGTGATAAGATGACTCCAAAGTC
CGAGTTCTCCTGGTCCAAAGATTATGTATCCACTGAGGACTCTCCACGATTGGAAGTCGAAAGCAAGGGC
AACAAGACGAAAATGACCTTCAAAGACCTTGGGATGGATGACTTGGGTATTTACTCTTGCGATGTAACAG
ACACTGATGGAATAGCATCAAGCTACTTAATAGATGAGGAAGAATTGAAACGTTTACTTGCTCTCAGCCA
TGAACACAAGTTCCCAACTGTCCCAGTTAAATCAGAGTTGGCAGTTGAAATTTTGGAGAAAGGCCAGGTC
CGGTTTTGGATGCAGGCTGAGAAACTGTCTGGCAATGCCAAAGTCAACTACATATTTAACGAGAAGGAAA
TTTTTGAAGGCCCGAAATATAAAATGCATATTGACCGAAACACTGGCATCATCGAAATGTTCATGGAAAA
GCTACAGGATGAGGATGAGGGAACGTACACTTTCCAGCTTCAAGATGGAAAAGCAACTAACCATTCTACT
GTTGTTCTCGTTGGAGATGTTTTCAAAAAGCTCCAGAAAGAAGCTGAATTCCAGCGGCAAGAATGGATCA
GGAAACAAGGTCCTCACTTTGTTGAGTATTTGAGCTGGGAAGTGACTGGTGAATGTAATGTACTATTGAA
ATGCAAGGTGGCAAATATTAAGAAGGAGACTCATATTGTGTGGTACAAAGATGAGAGGGAGATATCAGTG
GATGAAAAGCATGACTTTAAGGATGGTATATGTACCCTGCTTATAACAGAGTTTTCCAAGAAAGATGCTG
GGATTTATGAAGTTATCCTGAAAGATGACCGAGGAAAAGATAAGAGCAGACTGAAGCTTGTGGATGAAGC
CTTTAAGGAACTGATGATGGAAGTATGCAAAAAAATAGCTTTGTCTGCTACAGACCTGAAAATCCAGAGC
ACAGCCGAGGGCATCCAACTGTACTCTTTTGTAACTTACTATGTGGAGGATTTGAAAGTTAACTGGTCCC
ACAATGGGTCCGCCATTAGGTACTCAGACAGAGTTAAGACCGGGGTCACTGGAGAGCAGATCTGGCTACA
AATCAACGAGCCCACCCCGAATGACAAAGGGAAGTATGTCATGGAGCTCTTTGATGGCAAAACTGGACAT
CAGAAGACAGTGGATCTCTCTGGACAAGCATACGATGAGGCCTATGCTGAATTCCAGAGGTTGAAACAAG
CTGCCATTGCCGAGAAAAATCGTGCCCGGGTGTTGGGAGGTCTCCCAGACGTGGTCACCATCCAGGAGGG
GAAGGCCCTTAATCTCACTTGCAACGTGTGGGGAGACCCGCCTCCGGAGGTGTCGTGGTTGAAGAACGAG
AAGGCCCTGGCCTCAGACGACCACTGCAACCTCAAGTTCGAGGCTGGGAGGACCGCGTACTTCACCATCA
ACGGCGTGAGCACCGCTGACTCGGGCAAATACGGGCTGGTTGTGAAGAACAAGTATGGCTCGGAGACCAG
CGACTTCACCGTCAGCGTGTTCATCCCAGAGGAGGAGGCGAGGATGGCCGCCTTGGAGTCCCTGAAAGGT
GGCAAGAAGGCCAAGTGA

Translation (1685 aa):
MSLPFYQRCHQHYDLSYRNKDVRSTVSHYQREKKRSAVYTQGSTAYSSRSSAAHRRESEAFRRASASSSQ
QQASQHALSSEVSRKAASAYDYGSSHGLTDSSLLLDDYSSKLSPKPKRAKHSLLSGEEKENLPSDYMVPI
FSGRQKHVSGITDTEEERIKEAAAYIAQRNLLASEEGITTSKQSTASKQTTASKQSTASKQSTASKQSTA
SRQSTASRQSVVSKQATSALQQEETSEKKSRKVVIREKAERLSLRKTLEETETYHAKLNEDHLLHAPEFI
IKPRSHTVWEKENVKLHCSIAGWPEPRVTWYKNQVPINVHANPGKYIIESRYGMHTLEINGCDFEDTAQY
RASAMNVKGELSAYASVVVKRYKGEFDETRFHAGASTMPLSFGVTPYGYASRFEIHFDDKFDVSFGREGE
TMSLGCRVVITPEIKHFQPEIQWYRNGVPLSPSKWVQTLWSGERATLTFSHLNKEDEGLYTIRVRMGEYY
EQYSAYVFVRDADAEIEGAPAAPLDVKCLEANKDYIIISWKQPAVDGGSPILGYFIDKCEVGTDSWSQCN
DTPVKFARFPVTGLIEGRSYIFRVRAVNKMGIGFPSRVSEPVAALDPAEKARLKSRPSAPWTGQIIVTEE
EPSEGIVPGPPTDLSVTEATRSYVVLSWKPPGQRGHEGIMYFVEKCEAGTENWQRVNTELPVKSPRFALF
DLAEGKSYCFRVRCSNSAGVGEPSEATEVTVVGDKLDIPKAPGKIIPSRNTDTSVVVSWEESKDAKELVG
YYIEASVAGSGKWEPCNNNPVKGSRFTCHGLVTGQSYIFRVRAVNAAGLSEYSQDSEAIEVKAAIGGGVS
PDVCPALSDEPGGLTASRGRVHEASPPTFQKDALLGSKPNKPSLPSSSQNLGQTEVSKVSETVQEELTPP
PQKAAPQGKSKSDPLKKKTDRAPPSPPCDITCLESFRDSMVLGWKQPDKIGGAEITGYYVNYREVIDGVP
GKWREANVKAVSEEAYKISNLKENMVYQFQVAAMNMAGLGAPSAVSECFKCEEWTIAVPGPPHSLKCSEV
RKDSLVLQWKPPVHSGRTPVTGYFVDLKEAKAKEDQWRGLNEAAIKNVYLKVRGLKEGVSYVFRVRAINQ
AGVGKPSDLAGPVVAETRPGTKEVVVNVDDDGVISLNFECDKMTPKSEFSWSKDYVSTEDSPRLEVESKG
NKTKMTFKDLGMDDLGIYSCDVTDTDGIASSYLIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQV
RFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHST
VVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISV
DEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEAFKELMMEVCKKIALSATDLKIQS
TAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGH
QKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNE
KALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFIPEEEARMAALESLKG
GKKAK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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