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Report for CCDS45915.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45915.1 Public Homo sapiens 19 SMIM24 24 110 108 CCDS HistoryNCBI Gene:284422Re-query CCDS DB by CCDS ID:45915.1Re-query CCDS DB by GeneID:284422See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45915.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000215531.6 ENSP00000215531.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000215531.6Link to Ensembl Protein Viewer:ENSP00000215531.4Re-query CCDS DB by Nucleotide ID:ENST00000215531Re-query CCDS DB by Protein ID:ENSP00000215531
Original member Current member NCBI NM_001136503.2 NP_001129975.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001136503.2Link to Protein Sequence:NP_001129975.1Re-query CCDS DB by Nucleotide ID:NM_001136503Re-query CCDS DB by Protein ID:NP_001129975Link to BLAST:NP_001129975.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001129975.1 130 O75264 130 100% 0 0

Chromosomal Locations for CCDS 45915.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 3474843 3474996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 3478419 3478478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 3478818 3478929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 3480397 3480463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (393 nt):
ATGGAGACCCTGGGGGCCCTTCTGGTGCTGGAGTTTCTGCTCCTCTCCCCGGTGGAGGCCCAGCAGGCCA
CGGAGCATCGCCTGAAGCCGTGGCTGGTGGGCCTGGCTGCGGTAGTCGGCTTCCTGTTCATCGTCTATTT
GGTCTTGCTGGCCAACCGCCTCTGGTGTTCCAAGGCCAGGGCTGAGGACGAGGAGGAGACCACGTTCAGA
ATGGAGTCCAACCTATACCAGGACCAGAGTGAAGACAAGAGAGAGAAGAAAGAGGCCAAGGAGAAAGAAG
AGAAGAGGAAGAAGGAGAAAAAGACAGCAAAGGAAGGAGAGAGCAACTTGGGACTGGATCTGGAGGAAAA
AGAGCCCGGAGACCATGAGAGAGCAAAGAGCACAGTCATGTGA

Translation (130 aa):
METLGALLVLEFLLLSPVEAQQATEHRLKPWLVGLAAVVGFLFIVYLVLLANRLWCSKARAEDEEETTFR
MESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPGDHERAKSTVM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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