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Report for CCDS46039.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46039.1 Public Homo sapiens 19 KCTD15 24 110 108 CCDS HistoryNCBI Gene:79047Re-query CCDS DB by CCDS ID:46039.1Re-query CCDS DB by GeneID:79047See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46039.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000430256.3 ENSP00000394390.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000430256.3Link to Ensembl Protein Viewer:ENSP00000394390.1Re-query CCDS DB by Nucleotide ID:ENST00000430256Re-query CCDS DB by Protein ID:ENSP00000394390
Original member Current member EBI ENST00000588881.5 ENSP00000464812.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000588881.5Link to Ensembl Protein Viewer:ENSP00000464812.1Re-query CCDS DB by Nucleotide ID:ENST00000588881Re-query CCDS DB by Protein ID:ENSP00000464812
Original member Current member EBI ENST00000589786.5 ENSP00000467612.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000589786.5Link to Ensembl Protein Viewer:ENSP00000467612.1Re-query CCDS DB by Nucleotide ID:ENST00000589786Re-query CCDS DB by Protein ID:ENSP00000467612
Original member Current member EBI ENST00000683859.1 ENSP00000508199.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000683859.1Link to Ensembl Protein Viewer:ENSP00000508199.1Re-query CCDS DB by Nucleotide ID:ENST00000683859Re-query CCDS DB by Protein ID:ENSP00000508199
Original member Current member NCBI NM_001129994.2 NP_001123466.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001129994.2Link to Protein Sequence:NP_001123466.1Re-query CCDS DB by Nucleotide ID:NM_001129994Re-query CCDS DB by Protein ID:NP_001123466Link to BLAST:NP_001123466.1
Original member Current member NCBI NM_001129995.2 NP_001123467.1 Accepted alive Link to Nucleotide Sequence:NM_001129995.2Link to Protein Sequence:NP_001123467.1Re-query CCDS DB by Nucleotide ID:NM_001129995Re-query CCDS DB by Protein ID:NP_001123467Link to BLAST:NP_001123467.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001123466.1 283 Q96SI1-1 283 100% 0 0
NP_001123467.1 283 Q96SI1-1 283 100% 0 0

Chromosomal Locations for CCDS 46039.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 33800455 33800520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 33801167 33801342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 33806863 33807007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 33811247 33811552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 33812790 33812948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (852 nt):
ATGCCTCACCGCAAGGAGCGGCCGAGCGGGTCCTCGCTTCACACACACGGCAGCACCGGCACCGCGGAGG
GAGGAAACATGTCCCGGCTGTCTCTCACCCGGTCGCCTGTGTCTCCCCTGGCTGCCCAGGGCATCCCCCT
GCCAGCCCAGCTCACCAAGTCCAATGCACCTGTGCACATCGATGTGGGCGGCCACATGTACACCAGCAGC
CTGGCCACGCTCACCAAGTACCCTGACTCCAGGATAAGCCGCCTCTTCAATGGCACTGAACCCATCGTCC
TGGACAGTTTGAAGCAACATTATTTCATTGACCGGGATGGGGAGATTTTCCGCTACGTCCTGAGCTTCCT
GCGGACGTCCAAGCTGCTGCTTCCGGATGACTTTAAGGACTTCAGTCTGCTGTACGAGGAGGCGCGCTAC
TATCAGCTCCAGCCCATGGTGCGCGAGCTGGAGCGCTGGCAGCAGGAGCAGGAGCAGCGGCGCCGCAGCC
GGGCCTGTGACTGCCTGGTGGTGCGCGTCACGCCCGACTTGGGCGAGCGGATCGCACTCAGCGGCGAGAA
GGCCCTCATCGAGGAGGTCTTCCCCGAGACCGGAGACGTCATGTGCAACTCCGTCAACGCCGGCTGGAAC
CAGGACCCCACGCACGTCATCCGCTTCCCGCTCAATGGCTACTGCCGGCTCAACTCGGTACAGGTCCTGG
AGCGGCTGTTCCAGAGGGGTTTCAGCGTGGCTGCGTCCTGTGGGGGCGGTGTGGACTCCTCCCAGTTCAG
CGAGTATGTGCTTTGCCGGGAGGAGCGGCGGCCGCAGCCCACCCCCACTGCTGTTCGAATCAAGCAGGAA
CCCCTGGACTAG

Translation (283 aa):
MPHRKERPSGSSLHTHGSTGTAEGGNMSRLSLTRSPVSPLAAQGIPLPAQLTKSNAPVHIDVGGHMYTSS
LATLTKYPDSRISRLFNGTEPIVLDSLKQHYFIDRDGEIFRYVLSFLRTSKLLLPDDFKDFSLLYEEARY
YQLQPMVRELERWQQEQEQRRRSRACDCLVVRVTPDLGERIALSGEKALIEEVFPETGDVMCNSVNAGWN
QDPTHVIRFPLNGYCRLNSVQVLERLFQRGFSVAASCGGGVDSSQFSEYVLCREERRPQPTPTAVRIKQE
PLD


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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