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Report for CCDS46045.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46045.1 Public Homo sapiens 19 ZNF30 24 110 108 CCDS HistoryNCBI Gene:90075Re-query CCDS DB by CCDS ID:46045.1Re-query CCDS DB by GeneID:90075See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46045.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000601142.2 ENSP00000469954.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000601142.2Link to Ensembl Protein Viewer:ENSP00000469954.1Re-query CCDS DB by Nucleotide ID:ENST00000601142Re-query CCDS DB by Protein ID:ENSP00000469954
Original member Current member NCBI NM_194325.3 NP_919306.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_194325.3Link to Protein Sequence:NP_919306.2Re-query CCDS DB by Nucleotide ID:NM_194325Re-query CCDS DB by Protein ID:NP_919306Link to BLAST:NP_919306.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_919306.2 623 P17039-1 623 100% 0 0

Chromosomal Locations for CCDS 46045.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 34929948 34929956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 34931843 34931993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 34933628 34933723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 34943223 34944838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1872 nt):
ATGGCCCATAAATATGTGGGTTTGCAGTATCACGGATCAGTGACATTTGAGGATGTGGCCATAGCCTTCT
CCCAGCAGGAGTGGGAGAGTCTGGACTCTTCCCAGAGGGGCTTGTACAGAGATGTGATGTTGGAGAACTA
CAGGAACTTGGTGTCAATGGGACATTCCCGTTCTAAACCACATGTGATCGCCTTATTGGAACAATGGAAA
GAGCCTGAAGTGACAGTGAGGAAAGATGGAAGAAGATGGTGCACAGATTTGCAGTTGGAAGATGATACAA
TCGGCTGTAAAGAAATGCCCACCTCTGAAAACTGTCCATCTTTTGCTCTACATCAGAAAATAAGTAGACA
GAAACCACGTGAATGTCAGGAATATGGAAAGACCCTTTGTCAAGACTCAAAGCCTGTTCAACATGAAAGA
ATACATAGTAGTGAAAAACCCAACAGATGTAAAGAATGTGGGAAGAACTTTAGTAATGGACATCAACTCA
CCATACATCAGAGATTGCATGTTGGTGAGAAACCCTATAAATATGAAAAATGTGGGAAGGCCTTTATCAG
TGGCTCAGCCTTTGTTAAGCATGGGAGAATTCACACTGGTGAGAAGCCACTCAAATGTAAGCAATGTGGA
AAGACTATTAGTGGTAGCTATCAACTTACAGTACATAAGAGTATTCATACTGGGAAGAAACCATATGAGT
GCGGGGAATGTGGGAAAGCTTTTCTAGTATATGGAAAGCTTACCCGGCATCAGAGTACTCACACTGGTGA
AAAACCCTTTGGGTGTGAGGAGTGTGGGAAGGCCTTCAGTACCTTTTCATACCTGGTTCAACATCAGCGA
ATTCATACCAGTGAAAAACCTTACGAATGCAAAGAATGTGGGAAGGCCTTTAGCACTAGCTCACCCCTTG
CTAAGCATCAGAGAATTCATACTGGCGAGAAACCCTATGAATGTAAGGAGTGTGGGAAGTCCTTCACTGT
GTATGGACAGCTTACTCGACATCAGAGTATTCATACTGGTGAGAAACCTTTTGAATGTAAGGAATGTGGA
AAGGCCTTTAGACTTAGTTCCTTCCTTCATGCACATCAGCGAATTCATGCAGAGATAAAGCCCTACGGAT
GCAAGGAATGCGGGAGAACCTTCAGTCGTGCCTCATATCTTGTTCAACATGGAAGACTTCACACTGGCGA
GAAGCCCTATGAATGTAAGGAGTGTGGCAAGGCCTTTAGTACTGGCTCATACCTTGTTCAGCATCAGAGG
ATCCATACTGGGGAGAAACCCTATGAATGTAAGGAATGTGGCAAAGCCTTTATTAGTCGCCATCAGCTTA
CCGTACATCAAAGGGTTCATACTGGAGAGAAACCCTATGAGTGTAAGGAATGTGGCAAGGCCTTCAGAGT
GCACGTACATCTCACACAGCATCGGAAAATTCATACTGATGTAAAGCCCTATGAATGTAAGGAATGTGGA
AAGACTTTTAGTCGAGCCTCGTACCTTGTACAACATAGCAGAATCCATACTGGTAAGAAGCCCTATGAGT
GTAAGGAGTGTGGCAAGGCCTTCAGTTCTGGCTCATACCTTGTTCAGCATCAAAGAATTCATACTGGGGA
GAAACCCTATGAATGTAACAAATGTGGGAAAGCCTTTACTGTTTATGGACAACTTATTGGACATCAGAGT
GTTCACACTGGTGAGAAACCTTTTGAATGTAAGGAATGCGGGAAGGCCTTTAGACTTAATTCATTCCTTA
CTGAACATCAGCGGGTACACACTGGTGAGAAACCCTTTAAATGCAAAAAATGTGGGAAGACCTTTAGATA
CAGTTCAGCCCTTAAAGTGCATCTGAGAAAACATATGAGTGTTATACCCTAA

Translation (623 aa):
MAHKYVGLQYHGSVTFEDVAIAFSQQEWESLDSSQRGLYRDVMLENYRNLVSMGHSRSKPHVIALLEQWK
EPEVTVRKDGRRWCTDLQLEDDTIGCKEMPTSENCPSFALHQKISRQKPRECQEYGKTLCQDSKPVQHER
IHSSEKPNRCKECGKNFSNGHQLTIHQRLHVGEKPYKYEKCGKAFISGSAFVKHGRIHTGEKPLKCKQCG
KTISGSYQLTVHKSIHTGKKPYECGECGKAFLVYGKLTRHQSTHTGEKPFGCEECGKAFSTFSYLVQHQR
IHTSEKPYECKECGKAFSTSSPLAKHQRIHTGEKPYECKECGKSFTVYGQLTRHQSIHTGEKPFECKECG
KAFRLSSFLHAHQRIHAEIKPYGCKECGRTFSRASYLVQHGRLHTGEKPYECKECGKAFSTGSYLVQHQR
IHTGEKPYECKECGKAFISRHQLTVHQRVHTGEKPYECKECGKAFRVHVHLTQHRKIHTDVKPYECKECG
KTFSRASYLVQHSRIHTGKKPYECKECGKAFSSGSYLVQHQRIHTGEKPYECNKCGKAFTVYGQLIGHQS
VHTGEKPFECKECGKAFRLNSFLTEHQRVHTGEKPFKCKKCGKTFRYSSALKVHLRKHMSVIP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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