NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS46102.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46102.1 Public Homo sapiens 19 ZNF226 24 110 108 CCDS HistoryNCBI Gene:7769Re-query CCDS DB by CCDS ID:46102.1Re-query CCDS DB by GeneID:7769See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46102.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000337433.10 ENSP00000336719.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000337433.10Link to Ensembl Protein Viewer:ENSP00000336719.5Re-query CCDS DB by Nucleotide ID:ENST00000337433Re-query CCDS DB by Protein ID:ENSP00000336719
Original member Current member EBI ENST00000454662.6 ENSP00000393265.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000454662.6Link to Ensembl Protein Viewer:ENSP00000393265.1Re-query CCDS DB by Nucleotide ID:ENST00000454662Re-query CCDS DB by Protein ID:ENSP00000393265
Original member Current member EBI ENST00000590089.5 ENSP00000465121.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000590089.5Link to Ensembl Protein Viewer:ENSP00000465121.1Re-query CCDS DB by Nucleotide ID:ENST00000590089Re-query CCDS DB by Protein ID:ENSP00000465121
Original member Current member NCBI NM_001032372.2 NP_001027544.1 Accepted alive Link to Nucleotide Sequence:NM_001032372.2Link to Protein Sequence:NP_001027544.1Re-query CCDS DB by Nucleotide ID:NM_001032372Re-query CCDS DB by Protein ID:NP_001027544Link to BLAST:NP_001027544.1
Original member Current member NCBI NM_001032373.2 NP_001027545.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001032373.2Link to Protein Sequence:NP_001027545.1Re-query CCDS DB by Nucleotide ID:NM_001032373Re-query CCDS DB by Protein ID:NP_001027545Link to BLAST:NP_001027545.1
Original member Current member NCBI NM_001319088.2 NP_001306017.1 Accepted alive Link to Nucleotide Sequence:NM_001319088.2Link to Protein Sequence:NP_001306017.1Re-query CCDS DB by Nucleotide ID:NM_001319088Re-query CCDS DB by Protein ID:NP_001306017Link to BLAST:NP_001306017.1
Original member Current member NCBI NM_001319089.2 NP_001306018.1 Accepted alive Link to Nucleotide Sequence:NM_001319089.2Link to Protein Sequence:NP_001306018.1Re-query CCDS DB by Nucleotide ID:NM_001319089Re-query CCDS DB by Protein ID:NP_001306018Link to BLAST:NP_001306018.1
Original member Current member NCBI NM_001319090.2 NP_001306019.1 Accepted alive Link to Nucleotide Sequence:NM_001319090.2Link to Protein Sequence:NP_001306019.1Re-query CCDS DB by Nucleotide ID:NM_001319090Re-query CCDS DB by Protein ID:NP_001306019Link to BLAST:NP_001306019.1
Original member Current member NCBI NM_001388168.1 NP_001375097.1 Accepted alive Link to Nucleotide Sequence:NM_001388168.1Link to Protein Sequence:NP_001375097.1Re-query CCDS DB by Nucleotide ID:NM_001388168Re-query CCDS DB by Protein ID:NP_001375097Link to BLAST:NP_001375097.1
Original member Current member NCBI NM_001388169.1 NP_001375098.1 Accepted alive Link to Nucleotide Sequence:NM_001388169.1Link to Protein Sequence:NP_001375098.1Re-query CCDS DB by Nucleotide ID:NM_001388169Re-query CCDS DB by Protein ID:NP_001375098Link to BLAST:NP_001375098.1
Original member Current member NCBI NM_001388170.1 NP_001375099.1 Accepted alive Link to Nucleotide Sequence:NM_001388170.1Link to Protein Sequence:NP_001375099.1Re-query CCDS DB by Nucleotide ID:NM_001388170Re-query CCDS DB by Protein ID:NP_001375099Link to BLAST:NP_001375099.1
Original member Current member NCBI NM_001388171.1 NP_001375100.1 Accepted alive Link to Nucleotide Sequence:NM_001388171.1Link to Protein Sequence:NP_001375100.1Re-query CCDS DB by Nucleotide ID:NM_001388171Re-query CCDS DB by Protein ID:NP_001375100Link to BLAST:NP_001375100.1
Original member Current member NCBI NM_001388172.1 NP_001375101.1 Accepted alive Link to Nucleotide Sequence:NM_001388172.1Link to Protein Sequence:NP_001375101.1Re-query CCDS DB by Nucleotide ID:NM_001388172Re-query CCDS DB by Protein ID:NP_001375101Link to BLAST:NP_001375101.1
Original member Current member NCBI NM_016444.3 NP_057528.2 Accepted alive Link to Nucleotide Sequence:NM_016444.3Link to Protein Sequence:NP_057528.2Re-query CCDS DB by Nucleotide ID:NM_016444Re-query CCDS DB by Protein ID:NP_057528Link to BLAST:NP_057528.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001027544.1 803 Q9NYT6-1 803 100% 0 0
NP_001027545.1 803 Q9NYT6-1 803 100% 0 0
NP_001306017.1 803 Q9NYT6-1 803 100% 0 0
NP_001306018.1 803 Q9NYT6-1 803 100% 0 0
NP_001306019.1 803 Q9NYT6-1 803 100% 0 0
NP_001375097.1 803 Q9NYT6-1 803 100% 0 0
NP_001375098.1 803 Q9NYT6-1 803 100% 0 0
NP_001375099.1 803 Q9NYT6-1 803 100% 0 0
NP_001375100.1 803 Q9NYT6-1 803 100% 0 0
NP_001375101.1 803 Q9NYT6-1 803 100% 0 0
NP_057528.2 803 Q9NYT6-1 803 100% 0 0

Chromosomal Locations for CCDS 46102.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 44170081 44170095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44172088 44172214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44172860 44172952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44175498 44177674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2412 nt):
ATGAATATGTTCAAGGAAGCAGTGACCTTCAAGGACGTGGCTGTGGCCTTCACGGAGGAGGAATTGGGGC
TGCTGGGCCCTGCCCAGAGGAAGCTGTACCGAGATGTGATGGTGGAGAACTTTAGGAACCTGCTGTCAGT
GGGGCATCCACCCTTCAAACAAGATGTATCACCTATAGAAAGAAATGAGCAGCTTTGGATAATGACGACA
GCAACCCGAAGACAGGGAAATTTAGGAGAGAAAAATCAAAGTAAGTTAATTACTGTTCAAGACAGAGAAT
CAGAAGAAGAGCTTTCTTGTTGGCAAATCTGGCAACAAATTGCAAATGACTTAACCAGGTGTCAAGACTC
CATGATCAATAATTCTCAGTGTCACAAACAAGGTGATTTCCCTTACCAGGTAGGGACAGAACTGTCTATT
CAAATTTCTGAAGATGAGAACTATATAGTAAATAAAGCAGATGGTCCCAATAATACTGGGAATCCAGAGT
TTCCTATCTTGAGAACCCAGGATTCTTGGAGGAAAACATTCCTGACTGAGTCACAGAGATTGAACAGAGA
TCAGCAAATTTCCATAAAAAATAAATTATGTCAATGTAAGAAGGGTGTTGATCCCATCGGTTGGATTTCA
CATCATGATGGTCATAGAGTACACAAAAGTGAAAAATCTTATAGACCCAATGATTATGAAAAAGACAACA
TGAAGATTTTGACATTTGATCACAATAGCATGATTCACACAGGACAGAAATCGTACCAGTGTAATGAGTG
TAAAAAACCCTTCAGTGATCTCTCCAGCTTTGATCTTCATCAGCAGTTACAATCAGGAGAGAAGTCTCTT
ACATGTGTTGAGCGTGGAAAAGGCTTCTGTTACAGCCCAGTTCTTCCTGTTCATCAGAAAGTACATGTGG
GAGAAAAACTTAAGTGTGATGAGTGTGGTAAGGAATTCAGTCAGGGCGCTCATCTACAGACCCATCAGAA
AGTCCACGTGATAGAGAAACCATACAAATGTAAGCAATGTGGGAAAGGTTTCAGTCGTAGATCAGCACTT
AATGTTCATTGCAAGGTCCACACGGCAGAGAAACCTTATAATTGTGAGGAGTGTGGGAGGGCCTTCAGTC
AGGCCTCTCATCTTCAGGACCATCAGAGACTCCACACTGGGGAGAAGCCATTCAAATGTGATGCATGTGG
TAAGAGCTTCAGTCGGAATTCACATCTTCAATCCCATCAAAGAGTTCATACAGGAGAGAAACCATACAAA
TGTGAGGAGTGTGGTAAGGGCTTCATTTGTAGCTCAAATCTTTACATTCATCAGAGAGTCCACACAGGAG
AAAAACCCTATAAATGTGAGGAATGTGGTAAAGGCTTTAGTCGGCCTTCAAGTCTTCAGGCCCATCAGGG
AGTTCACACTGGAGAGAAGTCATACATATGTACTGTATGTGGGAAAGGCTTTACTCTGAGTTCAAATCTT
CAAGCCCATCAGAGAGTCCACACTGGAGAGAAGCCATACAAATGCAATGAGTGTGGGAAGAGCTTCAGGA
GGAATTCCCATTATCAAGTTCATCTAGTGGTCCACACAGGAGAGAAACCCTATAAATGTGAGATATGTGG
GAAGGGCTTCAGTCAAAGTTCGTATCTTCAAATCCATCAGAAGGCCCACAGTATAGAGAAACCTTTTAAG
TGTGAGGAGTGTGGGCAGGGTTTCAATCAGAGCTCACGACTTCAGATTCACCAGCTGATCCATACGGGTG
AGAAACCATACAAATGTGAAGAGTGTGGCAAGGGATTTAGTCGTAGAGCAGATCTTAAAATTCACTGTAG
GATCCACACAGGAGAGAAACCATATAATTGTGAGGAGTGTGGGAAGGTCTTCAGGCAGGCCTCAAATCTT
TTGGCCCATCAGAGAGTCCACAGTGGAGAAAAACCATTCAAATGTGAAGAATGTGGGAAGAGTTTCGGTC
GGAGTGCACATCTTCAAGCCCATCAAAAAGTCCACACTGGAGATAAGCCATACAAATGTGATGAGTGTGG
GAAGGGCTTCAAGTGGAGCTTGAACCTTGACATGCATCAGAGGGTGCACACAGGAGAAAAACCATATAAA
TGTGGGGAGTGTGGTAAGTACTTCAGTCAGGCCTCAAGTCTTCAACTTCATCAGAGTGTCCACACAGGAG
AGAAACCATACAAATGTGATGTGTGTGGTAAAGTCTTCAGTCGGTCTTCACAACTACAGTCTCATCAGCG
AGTTCACACTGGGGAGAAACCTTATAAATGTGAGATATGTGGTAAGAGCTTCAGTTGGCGATCAAATCTT
ACAGTTCATCACAGAATCCATGTTGGTGATAAATCCTATAAAAGTAATAGGGGTGGTAAGAACATCAGAG
AATCCACACAGGAAAAAAAATCTATAAAATGA

Translation (803 aa):
MNMFKEAVTFKDVAVAFTEEELGLLGPAQRKLYRDVMVENFRNLLSVGHPPFKQDVSPIERNEQLWIMTT
ATRRQGNLGEKNQSKLITVQDRESEEELSCWQIWQQIANDLTRCQDSMINNSQCHKQGDFPYQVGTELSI
QISEDENYIVNKADGPNNTGNPEFPILRTQDSWRKTFLTESQRLNRDQQISIKNKLCQCKKGVDPIGWIS
HHDGHRVHKSEKSYRPNDYEKDNMKILTFDHNSMIHTGQKSYQCNECKKPFSDLSSFDLHQQLQSGEKSL
TCVERGKGFCYSPVLPVHQKVHVGEKLKCDECGKEFSQGAHLQTHQKVHVIEKPYKCKQCGKGFSRRSAL
NVHCKVHTAEKPYNCEECGRAFSQASHLQDHQRLHTGEKPFKCDACGKSFSRNSHLQSHQRVHTGEKPYK
CEECGKGFICSSNLYIHQRVHTGEKPYKCEECGKGFSRPSSLQAHQGVHTGEKSYICTVCGKGFTLSSNL
QAHQRVHTGEKPYKCNECGKSFRRNSHYQVHLVVHTGEKPYKCEICGKGFSQSSYLQIHQKAHSIEKPFK
CEECGQGFNQSSRLQIHQLIHTGEKPYKCEECGKGFSRRADLKIHCRIHTGEKPYNCEECGKVFRQASNL
LAHQRVHSGEKPFKCEECGKSFGRSAHLQAHQKVHTGDKPYKCDECGKGFKWSLNLDMHQRVHTGEKPYK
CGECGKYFSQASSLQLHQSVHTGEKPYKCDVCGKVFSRSSQLQSHQRVHTGEKPYKCEICGKSFSWRSNL
TVHHRIHVGDKSYKSNRGGKNIRESTQEKKSIK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH