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Report for CCDS4616.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4616.1 Public Homo sapiens 6 ABT1 24 110 108 CCDS HistoryNCBI Gene:29777Re-query CCDS DB by CCDS ID:4616.1Re-query CCDS DB by GeneID:29777See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4616.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000274849.3 ENSP00000274849.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000274849.3Link to Ensembl Protein Viewer:ENSP00000274849.1Re-query CCDS DB by Nucleotide ID:ENST00000274849Re-query CCDS DB by Protein ID:ENSP00000274849
Original member Current member NCBI NM_013375.4 NP_037507.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_013375.4Link to Protein Sequence:NP_037507.1Re-query CCDS DB by Nucleotide ID:NM_013375Re-query CCDS DB by Protein ID:NP_037507Link to BLAST:NP_037507.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_037507.1 272 Q9ULW3 272 100% 0 0

Chromosomal Locations for CCDS 4616.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 26596983 26597223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 26597914 26598110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 26598265 26598645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (819 nt):
ATGGAGGCAGAGGAATCGGAGAAGGCCGCAACGGAGCAAGAGCCGCTGGAAGGGACAGAACAGACACTAG
ATGCGGAGGAGGAGCAGGAGGAATCCGAAGAAGCGGCCTGTGGCAGCAAGAAACGGGTAGTGCCAGGTAT
TGTGTACCTGGGCCATATCCCGCCGCGCTTCCGGCCCCTGCACGTCCGCAACCTTCTCAGCGCCTATGGC
GAGGTCGGACGCGTCTTCTTTCAGGCTGAGGACCGGTTCGTGAGACGCAAGAAGAAGGCAGCAGCAGCTG
CCGGAGGAAAAAAGCGGTCCTACACCAAGGACTACACCGAGGGATGGGTGGAGTTCCGTGACAAGCGCAT
AGCCAAGCGCGTGGCGGCCAGTCTACACAACACGCCTATGGGTGCCCGCAGGCGCAGCCCCTTCCGTTAT
GATCTTTGGAACCTCAAGTACTTGCACCGTTTCACCTGGTCCCACCTCAGCGAGCACCTCGCCTTTGAGC
GCCAGGTGCGCAGGCAGCGCTTGAGAGCGGAGGTTGCTCAAGCCAAGCGTGAGACCGACTTCTATCTTCA
AAGTGTGGAACGGGGACAACGCTTTCTTGCGGCCGATGGGGACCCTGCTCGCCCAGATGGCTCCTGGACA
TTTGCCCAGCGTCCTACTGAGCAGGAACTGAGGGCCCGTAAAGCAGCACGGCCAGGGGGACGTGAACGGG
CTCGCCTGGCAACTGCCCAGGACAAGGCCCGCTCCAACAAAGGGCTCCTGGCCAGGATCTTTGGAGCCCC
GCCACCCTCAGAGAGCATGGAGGGACCTTCCCTTGTCAGGGACTCCTGA

Translation (272 aa):
MEAEESEKAATEQEPLEGTEQTLDAEEEQEESEEAACGSKKRVVPGIVYLGHIPPRFRPLHVRNLLSAYG
EVGRVFFQAEDRFVRRKKKAAAAAGGKKRSYTKDYTEGWVEFRDKRIAKRVAASLHNTPMGARRRSPFRY
DLWNLKYLHRFTWSHLSEHLAFERQVRRQRLRAEVAQAKRETDFYLQSVERGQRFLAADGDPARPDGSWT
FAQRPTEQELRARKAARPGGRERARLATAQDKARSNKGLLARIFGAPPPSESMEGPSLVRDS


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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