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Report for CCDS46170.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46170.1 Public Homo sapiens 19 ZNF845 24 110 108 CCDS HistoryNCBI Gene:91664Re-query CCDS DB by CCDS ID:46170.1Re-query CCDS DB by GeneID:91664See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46170.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000458035.3 ENSP00000388311.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000458035.3Link to Ensembl Protein Viewer:ENSP00000388311.1Re-query CCDS DB by Nucleotide ID:ENST00000458035Re-query CCDS DB by Protein ID:ENSP00000388311
Original member Current member EBI ENST00000595091.6 ENSP00000470005.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000595091.6Link to Ensembl Protein Viewer:ENSP00000470005.1Re-query CCDS DB by Nucleotide ID:ENST00000595091Re-query CCDS DB by Protein ID:ENSP00000470005
Original member Current member NCBI NM_001321522.2 NP_001308451.1 Accepted alive Link to Nucleotide Sequence:NM_001321522.2Link to Protein Sequence:NP_001308451.1Re-query CCDS DB by Nucleotide ID:NM_001321522Re-query CCDS DB by Protein ID:NP_001308451Link to BLAST:NP_001308451.1
Original member Current member NCBI NM_001321523.2 NP_001308452.1 Accepted alive Link to Nucleotide Sequence:NM_001321523.2Link to Protein Sequence:NP_001308452.1Re-query CCDS DB by Nucleotide ID:NM_001321523Re-query CCDS DB by Protein ID:NP_001308452Link to BLAST:NP_001308452.1
Original member Current member NCBI NM_001321524.2 NP_001308453.1 Accepted alive Link to Nucleotide Sequence:NM_001321524.2Link to Protein Sequence:NP_001308453.1Re-query CCDS DB by Nucleotide ID:NM_001321524Re-query CCDS DB by Protein ID:NP_001308453Link to BLAST:NP_001308453.1
Original member Current member NCBI NM_138374.3 NP_612383.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_138374.3Link to Protein Sequence:NP_612383.1Re-query CCDS DB by Nucleotide ID:NM_138374Re-query CCDS DB by Protein ID:NP_612383Link to BLAST:NP_612383.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001308451.1 970 Q96IR2 970 100% 0 0
NP_001308452.1 970 Q96IR2 970 100% 0 0
NP_001308453.1 970 Q96IR2 970 100% 0 0
NP_612383.1 970 Q96IR2 970 100% 0 0

Chromosomal Locations for CCDS 46170.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 53341308 53341322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 53345506 53345632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 53350818 53353588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2913 nt):
ATGGCTCTTTCTCAGGGTCTATTGACATTCAGGGATGTGGCCATAGAATTCTCTCAGGAAGAGTGGAAGT
GCCTGGACCCTGCTCAGAGGACTCTATACAGGGACGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCT
GGATATCTCTTCCAAATGCATGATGAAGGAGTTCTCATCAACAGCACAAGGCAATACAGAAGTGATCCAC
ACAGGGACATTGCAAAGACATGAACGTCATCACATTGGAGATTTTTGCTTCCAGGAAATGGAGAAAGATA
TTCATGATTTTGAGTTTCAGTGGAAAGAAGATGAAAGAAATAGCCATGAAGCACCCATGACAGAAATCAA
ACAGTTGACGGGTAGTACAAACCGACATGATCAAAGGCATGCTGGAAACAAGCCTATTAAAGATCAGCTT
GGATCAAGCTTTCATTCGCATCTGCCTGAACTCCACATGTTTCAGACCGAAGGGAAAATTGGTAATCAAG
TTGAGAAGTCTATCAACAGTGCTTCGTTGGTTTCAACATCCCAAAGAATTTCTTGTAGGCCTAAAACCCA
CATTTCTAAGAACTATGGGAATAATTTCCTGAATTCTTCATTACTCACACAAAAGCAGGAAGTACACATG
AGAGAAAAATCTTTCCAATGTAATGAGAGTGGCAAAGCCTTTAATTATAGCTCAGTCTTAAGGAAACATC
AGATAATCCATTTAGGAGCGAAACAATATAAATGTGATGTGTGTGGCAAGGTCTTTAATCAAAAGCGATA
TCTTGCATGTCATCGTAGATGTCACACTGGCAAGAAACCTTACAAGTGTAATGATTGTGGCAAGACCTTC
AGTCAGGAGTTAACCCTTACATGCCATCATAGACTTCATACTGGAGAGAAACATTACAAGTGCAGTGAGT
GTGGCAAGACCTTCAGTCGAAATTCAGCCCTTGTAATTCATAAGGCAATTCATACTGGAGAGAAATCTTA
CAAGTGTAATGAATGTGGCAAGACCTTCAGTCAAACGTCATACCTTGTGTACCATCGTAGACTTCATACT
GGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAGCTTTCAGTTTCAAATCAAACCTTGAAAGACATA
GGAAAATTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGCAGCAGGACCTTTAGTCGGAAGTCATC
CCTTACACGCCATCGTAGACTTCATACTGGAGAGAAACCTTATAAGTGTAATGATTGTGGCAAGACCTTC
AGTCAGATGTCATCCCTTGTATACCATCGTAGACTTCATACTGGAGAGAAACCTTACAAATGTGAAGAAT
GTGATGAAGCTTTCAGTTTCAAATCGAACCTTGAAAGACATAGGAGAATTCATACTGGAGAGAAACCTTA
CAAGTGTAATGATTGTGGCAAGACCTTCAGTCAGACATCATCCCTTGTATACCATCGTAGACTTCATACT
GGAGAGAAACCTTACAAATGTGAAGAATGTGATGAAGCTTTCAGTTTCAAATCAAACCTTGAAAGACATA
GGATAATTCATACTGGAGAGAAACTTTACAAGTGTAATGAATGTGGCAAGACCTTTAGTCGGAAGTCATC
CCTTACACGCCATTGTAGACTTCATACTGGAGAGAAACCTTACCAGTGTAATGAGTGTGGCAAAGCCTTT
CGTGGGCAGTCAGCACTTATTTACCATCAAGCAATCCATGGTATAGGGAAACTTTACAAATGTAATGATT
GTCACCAAGTCTTTAGTAATGCTACAACCATTGCAAATCATTGGAGAATCCATAATGAAGAGAGATCGTA
CAAGTGTAATAGATGTGGCAAATTTTTCAGACATCGTTCATACCTTGCAGTTCATTGGCGAACTCATAGT
GGAGAGAAACCTTACAAATGTGAAGAATGTGATGAAGCTTTCAGTTTCAAATCAAACCTTCAAAGACATA
GGAGAATTCATACTGGAGAGAAACCTTACAGGTGTAATGAATGTGGCAAGACCTTTAGTCGGAAGTCATA
CCTTACATGCCATCGTAGACTTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTC
GGTCGAAATTCAGCCCTTATAATTCACAAGGCAATTCATACTGGAGAGAAACCTTACAAGTGTAATGAGT
GTGGCAAGGCCTTCAGTCAGAAGTCATCCCTTACATGCCATCTTAGACTTCATACTGGAGAGAAACCTTA
CAAATGTGAAGAATGTGACAAAGTTTTCAGTCGCAAATCAAGCCTTGAAAAACACAGGAGAATTCATACT
GGAGAGAAACCATACAAATGTAAGGTTTGTGACAAAGCTTTTGGGCGTGATTCACACCTGGCACAACATA
CTAGAATTCACACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGAACTTCCGTCACAATTCAGC
CCTTGTAATTCATAAGGCAATTCATAGTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTC
CGTCACAATTCAGCCCTTGAAATTCATAAGGCAATTCATACTGGAGAAAAACCTTACAAGTGTAGTGAAT
GTGGCAAGGTTTTTAATAGAAAAGCAAACCTTTCACGTCATCATAGACTTCATACTGGAGAGAAACCTTA
CAAGTGTAATAAATGTGGTAAGGTTTTTAATCAACAAGCACACCTTGCATGTCATCATAGAATTCATACT
GGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAAACCTTCCGTCACAATTCAGTCCTTGTAATTCATA
AGACAATTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCGAAAAGCAAA
ACTTGCACGTCATCATAGAATTCATACTGGAAAGAAACATTAG

Translation (970 aa):
MALSQGLLTFRDVAIEFSQEEWKCLDPAQRTLYRDVMLENYRNLVSLDISSKCMMKEFSSTAQGNTEVIH
TGTLQRHERHHIGDFCFQEMEKDIHDFEFQWKEDERNSHEAPMTEIKQLTGSTNRHDQRHAGNKPIKDQL
GSSFHSHLPELHMFQTEGKIGNQVEKSINSASLVSTSQRISCRPKTHISKNYGNNFLNSSLLTQKQEVHM
REKSFQCNESGKAFNYSSVLRKHQIIHLGAKQYKCDVCGKVFNQKRYLACHRRCHTGKKPYKCNDCGKTF
SQELTLTCHHRLHTGEKHYKCSECGKTFSRNSALVIHKAIHTGEKSYKCNECGKTFSQTSYLVYHRRLHT
GEKPYKCEECDKAFSFKSNLERHRKIHTGEKPYKCNECSRTFSRKSSLTRHRRLHTGEKPYKCNDCGKTF
SQMSSLVYHRRLHTGEKPYKCEECDEAFSFKSNLERHRRIHTGEKPYKCNDCGKTFSQTSSLVYHRRLHT
GEKPYKCEECDEAFSFKSNLERHRIIHTGEKLYKCNECGKTFSRKSSLTRHCRLHTGEKPYQCNECGKAF
RGQSALIYHQAIHGIGKLYKCNDCHQVFSNATTIANHWRIHNEERSYKCNRCGKFFRHRSYLAVHWRTHS
GEKPYKCEECDEAFSFKSNLQRHRRIHTGEKPYRCNECGKTFSRKSYLTCHRRLHTGEKPYKCNECGKTF
GRNSALIIHKAIHTGEKPYKCNECGKAFSQKSSLTCHLRLHTGEKPYKCEECDKVFSRKSSLEKHRRIHT
GEKPYKCKVCDKAFGRDSHLAQHTRIHTGEKPYKCNECGKNFRHNSALVIHKAIHSGEKPYKCNECGKTF
RHNSALEIHKAIHTGEKPYKCSECGKVFNRKANLSRHHRLHTGEKPYKCNKCGKVFNQQAHLACHHRIHT
GEKPYKCNECGKTFRHNSVLVIHKTIHTGEKPYKCNECGKVFNRKAKLARHHRIHTGKKH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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