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Report for CCDS46176.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46176.1 Public Homo sapiens 19 LILRB5 24 110 108 CCDS HistoryNCBI Gene:10990Re-query CCDS DB by CCDS ID:46176.1Re-query CCDS DB by GeneID:10990See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46176.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000449561.3 ENSP00000406478.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000449561.3Link to Ensembl Protein Viewer:ENSP00000406478.1Re-query CCDS DB by Nucleotide ID:ENST00000449561Re-query CCDS DB by Protein ID:ENSP00000406478
Original member Current member NCBI NM_001081442.3 NP_001074911.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001081442.3Link to Protein Sequence:NP_001074911.2Re-query CCDS DB by Nucleotide ID:NM_001081442Re-query CCDS DB by Protein ID:NP_001074911Link to BLAST:NP_001074911.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001074911.2 591 O75023-3 591 100% 0 0

Chromosomal Locations for CCDS 46176.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 54250786 54250932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 54252054 54252106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 54252366 54252403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 54252486 54252549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 54252871 54252987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 54254018 54254068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 54254365 54254415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 54254735 54255037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 54255286 54255582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 54256043 54256342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 54256489 54256773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 54256961 54256996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 54257160 54257193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1776 nt):
ATGACCCTCACCCTCTCAGTCCTGATTTGCCTCGGGCTGAGTGTGGGCCCCAGGACCTGCGTGCAGGCAG
GCACCCTCCCCAAACCCACCCTCTGGGCTGAGCCAGCCTCTGTGATAGCTCGGGGGAAGCCCGTGACCCT
CTGGTGTCAGGGGCCCCTGGAGACTGAGGAGTACCGTCTGGATAAGGAGGGACTCCCATGGGCCCGGAAG
AGACAGAACCCACTGGAGCCTGGAGCCAAGGCCAAGTTCCACATTCCATCCACGGTGTATGACAGTGCAG
GGCGATACCGCTGCTACTATGAGACCCCTGCAGGCTGGTCAGAGCCCAGTGACCCCCTGGAGCTGGTGGC
GACAGGATTCTATGCAGAACCCACTCTTTTAGCCCTGCCGAGTCCTGTGGTGGCCTCAGGAGGAAATGTG
ACCCTCCAGTGTGATACACTGGACGGACTTCTCACGTTTGTTCTTGTTGAGGAAGAACAGAAGCTCCCCA
GGACCCTGTACTCACAGAAGCTCCCCAAAGGGCCATCCCAGGCCCTGTTCCCTGTGGGTCCCGTGACCCC
CAGCTGCAGGTGGAGGTTCAGATGCTATTACTATTACAGGAAAAACCCTCAGGTGTGGTCGAACCCCAGT
GACCTCCTGGAGATTCTGGTCCCAGGCGTGTCTAGGAAGCCCTCCCTCCTGATCCCGCAGGGCTCTGTCG
TGGCCCGCGGAGGCAGCCTGACCCTGCAGTGTCGCTCTGATGTCGGCTATGACATATTCGTTCTGTACAA
GGAGGGGGAACATGACCTCGTCCAGGGCTCTGGCCAGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTC
ACCCTGGGCCCTGTGAGCCGCTCCCACGGGGGCCAGTACAGATGCTACGGTGCACACAACCTCTCCCCTA
GGTGGTCGGCCCCCAGCGACCCCCTGGACATCCTGATCGCAGGACTGATCCCTGACATACCCGCCCTCTC
GGTGCAGCCGGGCCCCAAGGTGGCCTCAGGAGAGAACGTGACCCTGCTGTGTCAGTCATGGCATCAGATA
GACACTTTCTTTTTGACCAAGGAGGGGGCAGCCCATCCCCCGCTGTGTCTAAAGTCAAAGTACCAGTCTT
ATAGACACCAGGCTGAATTCTCCATGAGTCCTGTGACCTCAGCCCAGGGTGGAACCTACCGATGCTACAG
CGCAATCAGGTCCTACCCCTACCTGCTGTCCAGCCCTAGTTACCCCCAGGAGCTCGTGGTCTCAGGACCC
TCTGGGGATCCCAGCCTCTCACCTACAGGCTCCACCCCCACACCTGCAGGCCCTGAGGACCAGCCCCTCA
CCCCCACGGGGTTGGATCCCCAGAGTGGTCTGGGAAGGCACCTGGGGGTTGTGACTGGGGTCTCAGTGGC
CTTCGTCCTGCTGCTGTTCCTCCTCCTCTTCCTCCTCCTCCGACATCGGCATCAGAGCAAACACAGGACA
TCGGCCCATTTCTACCGTCCTGCAGGGGCTGCGGGGCCAGAGCCCAAGGACCAGGGCCTGCAGAAGAGGG
CCAGCCCAGTTGCTGACATCCAGGAGGAAATTCTCAATGCTGCCGTGAAGGACACACAGCCCAAGGACGG
GGTGGAGATGGATGCTCCGGCTGCTGCATCTGAAGCCCCCCAGGATGTGACCTACGCCCAGCTGCACAGC
TTGACCCTCAGACGGGAGGCAACTGAGCCTCCTCCATCCCAGGAAAGGGAACCTCCAGCTGAACCCAGCA
TCTACGCCCCCCTGGCCATCCACTAG

Translation (591 aa):
MTLTLSVLICLGLSVGPRTCVQAGTLPKPTLWAEPASVIARGKPVTLWCQGPLETEEYRLDKEGLPWARK
RQNPLEPGAKAKFHIPSTVYDSAGRYRCYYETPAGWSEPSDPLELVATGFYAEPTLLALPSPVVASGGNV
TLQCDTLDGLLTFVLVEEEQKLPRTLYSQKLPKGPSQALFPVGPVTPSCRWRFRCYYYYRKNPQVWSNPS
DLLEILVPGVSRKPSLLIPQGSVVARGGSLTLQCRSDVGYDIFVLYKEGEHDLVQGSGQQPQAGLSQANF
TLGPVSRSHGGQYRCYGAHNLSPRWSAPSDPLDILIAGLIPDIPALSVQPGPKVASGENVTLLCQSWHQI
DTFFLTKEGAAHPPLCLKSKYQSYRHQAEFSMSPVTSAQGGTYRCYSAIRSYPYLLSSPSYPQELVVSGP
SGDPSLSPTGSTPTPAGPEDQPLTPTGLDPQSGLGRHLGVVTGVSVAFVLLLFLLLFLLLRHRHQSKHRT
SAHFYRPAGAAGPEPKDQGLQKRASPVADIQEEILNAAVKDTQPKDGVEMDAPAAASEAPQDVTYAQLHS
LTLRREATEPPPSQEREPPAEPSIYAPLAIH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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